BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009628
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31423.3| unnamed protein product [Vitis vinifera]              468   e-129
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   468   e-129
ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   454   e-125
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   449   e-124

>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  468 bits (1203), Expect = e-129
 Identities = 225/271 (83%), Positives = 255/271 (94%)
 Frame = +2

Query: 11  EPKYSKAARRFYNENFRDPPQRISKVLAASGVASRRSSEQLVFEGKVTVNGSVCNTPQTK 190
           EPKYSKAARRFYNENFRDPPQR+SKVLAA+GVASRR+SE+L+FEG+VTVNGSVCNTPQT+
Sbjct: 26  EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 191 VDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKEKKSVISLFDDYLKSWDKRN 370
           VDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKE KSV+ LFDDYLKSW+K+N
Sbjct: 86  VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 371 DGQPKPRLFTVGRLDVATSGLIIVTNDGEFAQQISHPSSNLSKEYIATIDGAVNKRHLLA 550
            G PKPR+FTVGRLDVAT+GLII+TNDG+FAQ++SHPSS LSKEYIATIDG VNKRHL+A
Sbjct: 146 PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 551 ISEGTVIDGVLCTPDAVELLPQQPDISRVRLRIVVHEGRNHEVRELVKNAGLNIYALKRV 730
           ISEGTVI+GV CTPD+VELLP QP+IS+ RLR+VVHEGRNHEVRELVK+AGL I++LKR+
Sbjct: 206 ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 731 RIGAFRLPPDLILGKHMELKQTHLRALGWKT 823
           RIG FRLP DL  GKH+ELKQ  L+ALGWK+
Sbjct: 266 RIGGFRLPSDLGHGKHVELKQGDLKALGWKS 296


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score =  468 bits (1203), Expect = e-129
 Identities = 225/271 (83%), Positives = 255/271 (94%)
 Frame = +2

Query: 11  EPKYSKAARRFYNENFRDPPQRISKVLAASGVASRRSSEQLVFEGKVTVNGSVCNTPQTK 190
           EPKYSKAARRFYNENFRDPPQR+SKVLAA+GVASRR+SE+L+FEG+VTVNGSVCNTPQT+
Sbjct: 123 EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 182

Query: 191 VDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKEKKSVISLFDDYLKSWDKRN 370
           VDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKE KSV+ LFDDYLKSW+K+N
Sbjct: 183 VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 242

Query: 371 DGQPKPRLFTVGRLDVATSGLIIVTNDGEFAQQISHPSSNLSKEYIATIDGAVNKRHLLA 550
            G PKPR+FTVGRLDVAT+GLII+TNDG+FAQ++SHPSS LSKEYIATIDG VNKRHL+A
Sbjct: 243 PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 302

Query: 551 ISEGTVIDGVLCTPDAVELLPQQPDISRVRLRIVVHEGRNHEVRELVKNAGLNIYALKRV 730
           ISEGTVI+GV CTPD+VELLP QP+IS+ RLR+VVHEGRNHEVRELVK+AGL I++LKR+
Sbjct: 303 ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 362

Query: 731 RIGAFRLPPDLILGKHMELKQTHLRALGWKT 823
           RIG FRLP DL  GKH+ELKQ  L+ALGWK+
Sbjct: 363 RIGGFRLPSDLGHGKHVELKQGDLKALGWKS 393


>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  456 bits (1172), Expect = e-126
 Identities = 224/273 (82%), Positives = 243/273 (89%)
 Frame = +2

Query: 2   LTPEPKYSKAARRFYNENFRDPPQRISKVLAASGVASRRSSEQLVFEGKVTVNGSVCNTP 181
           L  EP  SKAARRFYNENFRD  QR+SKVLAA+GVASRRSSE L+FEGKVTVNGSVCNTP
Sbjct: 124 LEAEPTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTP 183

Query: 182 QTKVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKEKKSVISLFDDYLKSWD 361
           QT+VDP RD IYVNGNRLPKKLPPK+Y+ALNKPKGYICS GEKE KSV+ L DDY +SWD
Sbjct: 184 QTRVDPGRDSIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWD 243

Query: 362 KRNDGQPKPRLFTVGRLDVATSGLIIVTNDGEFAQQISHPSSNLSKEYIATIDGAVNKRH 541
           KRN G PKPRLFTVGRLDVAT+GLIIVTNDG+FAQQI+HPSSNLSKEYIAT+DG V+KRH
Sbjct: 244 KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRH 303

Query: 542 LLAISEGTVIDGVLCTPDAVELLPQQPDISRVRLRIVVHEGRNHEVRELVKNAGLNIYAL 721
           L A+SEGTVI+GV C PD+VELLPQQPD  R RLRIVVHEGRNHEVRELVKNAGL I++L
Sbjct: 304 LFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSL 363

Query: 722 KRVRIGAFRLPPDLILGKHMELKQTHLRALGWK 820
           KRVRIG FRLP DL LGKH ELKQT L+ LGWK
Sbjct: 364 KRVRIGGFRLPSDLGLGKHAELKQTDLKTLGWK 396


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
           PREDICTED: uncharacterized RNA pseudouridine synthase
           aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  454 bits (1168), Expect = e-125
 Identities = 223/274 (81%), Positives = 250/274 (91%)
 Frame = +2

Query: 2   LTPEPKYSKAARRFYNENFRDPPQRISKVLAASGVASRRSSEQLVFEGKVTVNGSVCNTP 181
           +T  PK+SKAARRFYNEN R+  QR+SKVLAA+GVASRRSSE+L+F G+VTVNGSVCNTP
Sbjct: 125 ITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTP 184

Query: 182 QTKVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKEKKSVISLFDDYLKSWD 361
           QT+VDPARD+IYVNGNRLPKKLPPKVYLALNKPKGYICSSG+KE KSVISLFDDYLKSWD
Sbjct: 185 QTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWD 244

Query: 362 KRNDGQPKPRLFTVGRLDVATSGLIIVTNDGEFAQQISHPSSNLSKEYIATIDGAVNKRH 541
           K   GQPKPRLFTVGRLDVAT+GLIIVTNDG+FAQ ISHPSS LSKEYIA IDG V+K++
Sbjct: 245 KTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQN 304

Query: 542 LLAISEGTVIDGVLCTPDAVELLPQQPDISRVRLRIVVHEGRNHEVRELVKNAGLNIYAL 721
           L+AISEGT+IDGV CTPD+VELLP+QPDIS+ RLRIVVHEGRNHEVRELVK AGL IY+L
Sbjct: 305 LIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLEIYSL 364

Query: 722 KRVRIGAFRLPPDLILGKHMELKQTHLRALGWKT 823
           KRVRIG FRLP DL LG + ELKQ+ L+A+GWK+
Sbjct: 365 KRVRIGGFRLPSDLGLGSYTELKQSELKAIGWKS 398


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score =  449 bits (1154), Expect = e-124
 Identities = 211/270 (78%), Positives = 249/270 (92%)
 Frame = +2

Query: 11  EPKYSKAARRFYNENFRDPPQRISKVLAASGVASRRSSEQLVFEGKVTVNGSVCNTPQTK 190
           +PK SKAARRFYNENF++PPQR+SKVLAA+GVASRR+SE+L+F+GKVTVNG +CNTPQT+
Sbjct: 142 KPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTR 201

Query: 191 VDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKEKKSVISLFDDYLKSWDKRN 370
           VDP+RD+IYVNGNR+PKKLPPKVY ALNKPKGYICSSGEKE KSVISLFD+YL SWDKRN
Sbjct: 202 VDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLSSWDKRN 261

Query: 371 DGQPKPRLFTVGRLDVATSGLIIVTNDGEFAQQISHPSSNLSKEYIATIDGAVNKRHLLA 550
            G PKPRLFTVGRLDVAT+GLI+VTNDG+FAQ++SHPSS+L KEYI T+ G ++KRHL+A
Sbjct: 262 PGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMA 321

Query: 551 ISEGTVIDGVLCTPDAVELLPQQPDISRVRLRIVVHEGRNHEVRELVKNAGLNIYALKRV 730
           ISEGT+++GV C PD+VEL+P+Q DI R RLRIVVHEGRNHEVRELVKNAGL +++LKRV
Sbjct: 322 ISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRV 381

Query: 731 RIGAFRLPPDLILGKHMELKQTHLRALGWK 820
           RIG FRLP DL LGKH+ELKQ+ L+A+GWK
Sbjct: 382 RIGGFRLPSDLGLGKHVELKQSELKAMGWK 411