BLASTX nr result

ID: Bupleurum21_contig00009626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009626
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-18
gb|ACH54101.1| SFBB21-beta [Pyrus x bretschneideri]                    89   3e-15
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    88   5e-15
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    88   6e-15
gb|ACH54106.1| SFBB30-beta [Pyrus ussuriensis]                         88   6e-15

>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 14/254 (5%)
 Frame = +2

Query: 305  LWNPATRQCKMVPLPEKERHADKVFV------GFGFDSVQYDFKVVCIFRVKSKEKPLSR 466
            LWNPAT++ K+  LPEK R+   + +      GFGFD V  D+KVV I    ++E  L +
Sbjct: 116  LWNPATKEFKL--LPEKIRNKSSLPLYYEDSYGFGFDPVTNDYKVVVIRESYTREYYLEK 173

Query: 467  F-----YVYSCNGE---CWYQIKPDFPYNMPHMWCVVTVKGNPYWMGFTIEGENEDNIRE 622
            F      VY+   +   CW  +  D  Y +   +C   V G  YW               
Sbjct: 174  FPSSLVIVYTLRTDSWRCWGSL--DQGYTLLGNYCYTNVDGVYYWQA------GHGVHMN 225

Query: 623  VCVTFDVETEVFRFLPLPQYQSNSATGACLANYKDLLADMMFSPGSEPNKLVDVHVLDEK 802
            V ++F++ T+ F+ +  P Y    A    L  Y D +A   FS      K +D+ VL+E 
Sbjct: 226  VILSFNMATDAFQEIQEPDYDK-PAYSTRLILYHDSIA---FSTVHNVEKFLDIWVLNE- 280

Query: 803  SGVWSKLYTVGPISLEVQRVLHCFKNGEIVIEDHDGKLFLYDPTSKAIKDLRIDKAKELS 982
             G W + +   P+ LE++  +  +KNG ++++  + +L LYD   + +KDLR  K   + 
Sbjct: 281  -GCWIRQFKSRPL-LELRNPVAHWKNGNVILDSDNDQLMLYDTNKQELKDLRF-KGTGVC 337

Query: 983  YKAFCYTESLITIK 1024
            Y+   Y ESL++IK
Sbjct: 338  YEILVYRESLVSIK 351


>gb|ACH54101.1| SFBB21-beta [Pyrus x bretschneideri]
          Length = 394

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 26/269 (9%)
 Frame = +2

Query: 296  MIVLWNPATRQ-------CKMVPLPEKERHADKVF--VGFGFDSVQYDFKVVCIFRVKSK 448
            +I+L NP T +       C +VPLP+++   + +F  +GFG+D    ++KVV I      
Sbjct: 136  VIILCNPGTGEFRQLPDSCLLVPLPKEKFQLETIFGGLGFGYDCKAKEYKVVQIIENCEY 195

Query: 449  EKPLSRFY----------VYSCNGECWYQIKPDFPYNMPHMWCVVTVKGNPYWMGFTIEG 598
                  FY          VY+     W +IK D         C V +KG  YW  F  +G
Sbjct: 196  SDDERTFYHSIPLPHTAEVYTIAANSWKEIKIDISTKTYPSSCSVYLKGFCYW--FASDG 253

Query: 599  ENEDNIREVCVTFDVETEVFRFLPLPQYQSNSATGACLANYKDLLADMM--FSPGSEPNK 772
            E      E  ++FD+  E+F  + LP  + +S     L  Y + +      + P SE +K
Sbjct: 254  E------EYILSFDLGDEIFHRIQLPSRRESSFKFYDLFLYNESITSYCSHYDP-SEDSK 306

Query: 773  LVDVHVLDEKSGV---WSKLYTVGPISLEVQRVLHCFKNGEIVIEDHDGKLFLYDPTSKA 943
            L ++ V+D+  G+   W+KL TVGP    ++  L  +K  E+++   DG+   Y+ +   
Sbjct: 307  LFEIWVMDDYDGIKSSWTKLLTVGPFK-GIEYPLTLWKCDELLMLASDGRAISYNSSIGN 365

Query: 944  IKDLRIDKA--KELSYKAFCYTESLITIK 1024
            +K L I     + + ++A  Y +S+I +K
Sbjct: 366  LKYLHIPPIINEVIDFEALSYVKSIIPVK 394


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 95/318 (29%), Positives = 140/318 (44%), Gaps = 42/318 (13%)
 Frame = +2

Query: 293  FMIVLWNPATRQCKMVPLPEKERHAD----KV-----FVGFGFDSVQYDFKVVCIFRVKS 445
            F I L+NP+TR+ KM+P+   E   D    KV     F GFG D +  D+KVV       
Sbjct: 108  FSIALYNPSTREKKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYG 167

Query: 446  KEKPLSRFY----VYSCNGECWYQIKPDFPYNMP-------HMWCV----VTVKGNPYWM 580
             + P   F+    VYS     W +I  D+PY++        H  C     V      +W 
Sbjct: 168  -DSPDGFFHCEVKVYSLKSNSWKRID-DYPYDLRFILPPDYHPRCRRGYGVFANSAVHWK 225

Query: 581  GFTIEGENEDNIREVCVTFDVETEVFRFLPLPQYQSN------SATGACLANYKDLLADM 742
              T+ G+ ++N  ++ V FD+  E F+ +P P Y SN         G CL  +       
Sbjct: 226  A-TVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVF------- 277

Query: 743  MFSPGSEPNKLVDVHVLDEKSGV---WSKLYTVGPISLEVQ------RVLHCFKNGEIVI 895
                 ++  K V++ V+ E  GV   W+ L TV    L+V+      R L   K G+ ++
Sbjct: 278  ----CNKNCKQVEIWVMKE-YGVKESWTHLCTV-IAQLQVKAFWLHARPLAYSKGGDKIL 331

Query: 896  EDHDGKLFL-YDPTSKAIKDLRIDKAKELSYKAFCYTESLITIK--KMSNVEDDDLPETL 1066
             + D + F+ YD   +  K +RI  A  +     C   SL+T+           D  E  
Sbjct: 332  LELDNRFFVWYDLRRRKSKIIRIRGAPPIFIAEIC-VGSLVTLNGGGEGQTSGKDTQEKR 390

Query: 1067 DSTRKRDDFLSKGFKLKL 1120
             + +KRD FLSKGFKL L
Sbjct: 391  KTRKKRDQFLSKGFKLVL 408


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 29/303 (9%)
 Frame = +2

Query: 299  IVLWNPATRQCKMVP-LP-EKERH----ADKVFV-GFGFDSVQYDFKVVCI--FRVKSKE 451
            I +WNP+TR+ ++VP LP E +R+    +  V+V GFG+DSV+ D+K+V I  F    K 
Sbjct: 115  IAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKR 174

Query: 452  KPLSRFYVYSCNGECWYQIKPDFPYNMPHMWCV-VTVKGNPYWMGFTIEGEN-EDNIREV 625
               S   VYS   + W +I  D PY + +     V   G  +W    + GEN E N+  +
Sbjct: 175  SFESEVKVYSLRKQSWRRIG-DMPYCVHYPGANGVFANGALHW----VVGENPESNVANI 229

Query: 626  CVTFDVETEVFRFLPLPQYQSNS------ATGACLANYKDLLADMMFSPGSEPNKLVDVH 787
             V  D+  E +R +  P+Y+  +          CL    + L +            VDV 
Sbjct: 230  VVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGER-----------VDVW 278

Query: 788  VLDEKSGV---WSKLYTVGPIS----LEVQRVLHCFKNGEIVIEDHDG-KLFLYDPTSKA 943
            ++ E  GV   W+KL++V        L   + L   K+G+ V+ +HD   L  YD   K 
Sbjct: 279  MMKEY-GVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQ 337

Query: 944  IKDLRIDKAKELSYKAFCYTESLITIKKMSNVE----DDDLPETLDSTRKRDDFLSKGFK 1111
            +K+ RI      S++A  + ESLI++    +++    DDD  E      KRDDFLS+GFK
Sbjct: 338  VKN-RIPGIP-YSFEADTFVESLISVSPNRHLDGRTQDDD--EDSKDRNKRDDFLSEGFK 393

Query: 1112 LKL 1120
            L L
Sbjct: 394  LVL 396


>gb|ACH54106.1| SFBB30-beta [Pyrus ussuriensis]
          Length = 394

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
 Frame = +2

Query: 302  VLWNPATRQ-------CKMVPLPEKERHADKVF--VGFGFDSVQYDFKVVCIFRVKSKEK 454
            +L NP T +       C +VPLP+++   + +F  +GFG+D    ++KVV I        
Sbjct: 138  ILCNPGTGEFRQLPDSCLLVPLPKEKFQLETIFGGLGFGYDCKAKEYKVVQIIENCEYSD 197

Query: 455  PLSRFY----------VYSCNGECWYQIKPDFPYNMPHMWCVVTVKGNPYWMGFTIEGEN 604
                FY          VYS     W +IK D         C V +KG  YW  F  +GE 
Sbjct: 198  DERTFYHSIPLPHTAEVYSIAANSWKEIKIDISTKTYPSSCSVYLKGFCYW--FASDGE- 254

Query: 605  EDNIREVCVTFDVETEVFRFLPLPQYQSNSATGACLANYKDLLADMM--FSPGSEPNKLV 778
                 E  ++FD+  E+F  + LP  + +S     L  Y + +      + P SE +KL 
Sbjct: 255  -----EYILSFDLGDEIFHRIQLPSRRESSFKFYDLFLYNESITSYCSHYDP-SEDSKLF 308

Query: 779  DVHVLDEKSGV---WSKLYTVGPISLEVQRVLHCFKNGEIVIEDHDGKLFLYDPTSKAIK 949
            ++ V+D+  G+   W+KL TVGP    ++  L  +K  E+++   DG+   Y+ +   +K
Sbjct: 309  EIWVMDDYDGIKSSWTKLLTVGPFK-GIEYPLTLWKCDELLMLASDGRAISYNSSIGNLK 367

Query: 950  DLRIDKA--KELSYKAFCYTESLITI 1021
             L I     + + ++A  Y ES+I +
Sbjct: 368  YLHIPPIINEVIDFEALSYVESIILV 393


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