BLASTX nr result

ID: Bupleurum21_contig00009603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009603
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Gl...    86   2e-15
emb|CAD36199.1| NLS-TIR-NBS disease resistance protein [Populus ...    84   9e-15
gb|ABV30898.1| NBS-containing resistance-like protein [Platanus ...    84   2e-14
gb|ABV30874.1| NBS-containing resistance-like protein [Platanus ...    83   3e-14
ref|XP_003605057.1| TMV resistance protein N [Medicago truncatul...    82   5e-14

>ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/138 (34%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
 Frame = -3

Query: 430 VIDDLDNENHFKSLV---RKFASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRA 260
           V+DD++     K+L    + F  GS++IITT  +++LD +KV+  Y Y V+++D+ +S  
Sbjct: 301 VLDDVNEFGQLKNLCGNRKWFGQGSVIIITTRDRRLLDQLKVD--YVYDVDKMDENESLE 358

Query: 259 LFTKYAFEDATVNNSLMESYSEDILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQR 80
           LF+ +AF +A       E  + +++    GLPLALEV GSYL+ ++    W+S ++ L+R
Sbjct: 359 LFSWHAFNEAKPKEDFNE-LARNVVAYCGGLPLALEVLGSYLNERRKK-DWESVLSKLER 416

Query: 79  KPDYRIEQKLLISLNAVA 26
            P+ ++++KL IS + ++
Sbjct: 417 IPNDQVQEKLRISFDGLS 434


>emb|CAD36199.1| NLS-TIR-NBS disease resistance protein [Populus tremula]
          Length = 516

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
 Frame = -3

Query: 430 VIDDLDNENHFKSLVRK---FASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRA 260
           V+DD+D+ +   +L+ +   F  GS VIITT  +++L    +E   RY+V E+D  +S  
Sbjct: 285 VVDDVDHLDQLNALMGERSWFGPGSRVIITTRDERLL----LEADQRYQVQEMDPYESLQ 340

Query: 259 LFTKYAFEDATVNNSLMESYSEDILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQR 80
           LF ++AF DA      +E  S D++    GLPLALEV GS L   K+   W+S I  L+R
Sbjct: 341 LFCQHAFRDAKPAKDYVE-LSNDVVEYCGGLPLALEVLGSCL-IGKNQARWESVIDRLRR 398

Query: 79  KPDYRIEQKLLISLNAVALEDPMLK 5
            P++ I+++L IS +  +L+ P LK
Sbjct: 399 IPEHAIQERLRISFD--SLKAPNLK 421


>gb|ABV30898.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 265

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
 Frame = -3

Query: 430 VIDDLDNENHFKSLVRK---FASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRA 260
           + DD+D+ +   +LV +   F SGS VIITT  + VL+  KV+  Y++K  ELD  QS  
Sbjct: 72  IFDDVDDNDQINALVGEIECFGSGSKVIITTRYKHVLNRQKVDAIYKHK--ELDTHQSLQ 129

Query: 259 LFTKYAFEDATVNNSLMESYSEDILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQR 80
           L + +AF      N  +    + I     GLPLALEV G YLS +K  V WKS +  L++
Sbjct: 130 LLSNHAFGKDQPPNGFLHLV-KSIALATGGLPLALEVLGGYLSDKKELVEWKSTLEKLKK 188

Query: 79  KPDYRIEQKLLISLNAV 29
            P+ +I++KL IS +++
Sbjct: 189 IPNEKIQEKLKISYDSL 205


>gb|ABV30874.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 267

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
 Frame = -3

Query: 430 VIDDLDNENHFKSLVRK---FASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRA 260
           ++DD+D  N   SL  K   F  GS +IITT  + +L +++V+   +YKV E++  +S  
Sbjct: 73  ILDDVDELNQLNSLAEKRDWFGLGSRIIITTRDEHLLKNLQVDE--KYKVIEMNRNESLQ 130

Query: 259 LFTKYAFEDATVNNSLMESYSEDILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQR 80
           LF+ +AF     +   ME  S D++    GLPLALEV GS+L   K+   W+S +  LQR
Sbjct: 131 LFSLHAFRQDHPSKDYME-LSIDVVSHTGGLPLALEVLGSFLC-DKTITEWRSALEKLQR 188

Query: 79  KPDYRIEQKLLISLNAV 29
            PD R+ +KL IS + +
Sbjct: 189 IPDGRVMEKLKISFDGL 205


>ref|XP_003605057.1| TMV resistance protein N [Medicago truncatula]
            gi|355506112|gb|AES87254.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1626

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
 Frame = -3

Query: 430  VIDDLDNENHFKSLV---RKFASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRA 260
            VIDD++  +   +L    + F  GS ++ITT    +L  ++V+  YR K  E+D ++S  
Sbjct: 805  VIDDVNKLDQLNALCGDRKWFGKGSRILITTRDDDLLSRLEVDHVYRMK--EMDSSESLE 862

Query: 259  LFTKYAFEDATVNNSLMESYSEDILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQR 80
            LF  +AF+ +T       + S D+++ + GLPLAL+V GS+LST+K    WK  +  L+ 
Sbjct: 863  LFNWHAFKQSTSREGFT-NISRDVVKYSGGLPLALQVIGSFLSTKKIKAEWKDVLEKLKL 921

Query: 79   KPDYRIEQKLLISLNAVALED 17
             P+  + +KL IS + ++ +D
Sbjct: 922  IPNNEVLEKLRISFDGLSDDD 942



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
 Frame = -3

Query: 379 FASGSIVIITTTSQKVLDDIKVEPQYRYKVNELDDAQSRALFTKYAFEDATVNNSLMESY 200
           F  GS ++ITT+ + +L +++++  YR K   +D+ +S  LF+ +AF       S  ESY
Sbjct: 325 FGHGSRIVITTSDKHILRNLQLDHVYRMKY--MDNTESLKLFSWHAFRTP----SPKESY 378

Query: 199 SE---DILRLADGLPLALEVFGSYLSTQKSHVGWKSYIANLQRKPDYRIEQKLLISLNAV 29
           ++   D++    GLP+ALE+ GSYL   +S   WK  +   +    Y+IE+KL  +L+ +
Sbjct: 379 ADLCRDVVEYCGGLPVALEILGSYL-FDRSVQEWKIALQKFKTILPYQIEKKLRKNLDVL 437


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