BLASTX nr result
ID: Bupleurum21_contig00009540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009540
(1592 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243... 184 7e-44
ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M... 170 1e-39
emb|CBI15934.3| unnamed protein product [Vitis vinifera] 162 2e-37
ref|XP_003539338.1| PREDICTED: uncharacterized protein LOC100814... 153 1e-34
ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-29
>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
Length = 1332
Score = 184 bits (466), Expect = 7e-44
Identities = 148/450 (32%), Positives = 220/450 (48%), Gaps = 57/450 (12%)
Frame = +2
Query: 2 LFLELVSDFEKECWPLVVSVKQVWYDLRVKNGFDENLKEWTCCRSDVWKELLFEVVVDNV 181
LFLEL+ ++E++ WPL VS+KQ+WYD+R K GF E +KEWTC + +W+EL+ E + DN
Sbjct: 218 LFLELIEEYEQD-WPLNVSLKQIWYDVREKKGF-EKVKEWTCPSNALWRELVREAIADNF 275
Query: 182 KLTIKELFQRVE---FSRGKKFEECNVFSVLNGPDLYALMKSKPENSGDEVVSVV----- 337
++T+ ++ ++ + E S L+G + + NSGD + +V
Sbjct: 276 RITLNKICSMLKPEVLANCHAVEPIRGISPLDGSMMMTNNDANATNSGDYSIGLVDKLVE 335
Query: 338 ----------------------ESNRLD-VMPL---SALVKPTLEDEEPCVSPPKLAIEA 439
E + +D V+P S L P D+E V P L +
Sbjct: 336 NGGLATRFQYTDPKCSSNQHVQEKHEVDGVIPFVENSGLDMP-YRDKEMSVQPQPLLVIP 394
Query: 440 SCSNREKS----CRRSRKVSEKSKHQV--W--ISCDIL--PEYCADAVEKYLEVYGKLSK 589
S N+ ++ C+ + S ++ W + DIL E C DA+ +Y + K
Sbjct: 395 SKPNKLENFTFDCKSEGYSNNPSANRKNDWRRVDTDILHGAESCFDAIIEYALISSGKRK 454
Query: 590 TKNGNLLHDVTMKLRSHLLYLGWEVKSFQDKVGRRWRYTQPDGSRKCFRSLLTVCEHFRK 769
N +T +R HL YLGW+++ F +K R+RYT P+G K + SL VC+ R+
Sbjct: 455 PPNS-----LTENVRKHLSYLGWKIE-FMNKDFPRFRYTSPEG--KTYLSLRQVCQDLRR 506
Query: 770 SGRAKVPPFLQDEQNRS----SDAADPVIL-------SPLVEQSQGCKNDAIKTSCVDDG 916
P QD+Q D A P++ S L+E+SQ K S DD
Sbjct: 507 PDAGIDSPISQDDQRSLLSPYDDLAFPLVKLQVNDLSSQLIEKSQVSKGKWTVPSH-DDR 565
Query: 917 GDVLFEPEYCPLAVIDYYSLKIKINVQPSGHDKHKDMQLK--AKKHLSAVGWQLYLMYKD 1090
D+ + EYCP AV++YY L + S D + + LK AKKHLS +GW + Y+
Sbjct: 566 VDI--DHEYCPQAVVNYYFLGLDKKEHHSRKDDIRSLNLKSKAKKHLSFMGWTFWYAYRR 623
Query: 1091 NSQLREMRYRSPSGKIYYSLQSACKGYLKE 1180
REMRY SP GK YYSL++ACKG + E
Sbjct: 624 GK--REMRYFSPKGKCYYSLRTACKGCMDE 651
Score = 70.1 bits (170), Expect = 2e-09
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = +2
Query: 1367 VLGARKRVREGVVSSTYYTNPQTILSWLIDNNVVLPRDKVYCGRTRDDK-------TSEG 1525
VL +RKR R+ ++ + NP+TILSWLIDNNVVLPR KV+ RD T +G
Sbjct: 791 VLRSRKRARQVLIPGSS-NNPRTILSWLIDNNVVLPRAKVHYSSRRDHHPMADGRITRDG 849
Query: 1526 ---------------------THHQPSAHIYLEDGRSLLECQM 1591
++H+ +A+I+LEDGRSLLECQM
Sbjct: 850 IKCSCCQEVFSLSRFEAHAGSSYHRSAANIFLEDGRSLLECQM 892
>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
gi|355517044|gb|AES98667.1| Chromodomain
helicase-DNA-binding protein [Medicago truncatula]
Length = 1144
Score = 170 bits (430), Expect = 1e-39
Identities = 172/614 (28%), Positives = 265/614 (43%), Gaps = 84/614 (13%)
Frame = +2
Query: 2 LFLELVSDFEKECWPLVVSVKQVWYDLRVKNGFDENLKEWTCCRSDVWKELLFEVVVDNV 181
+FLEL + E+ + + VSVKQ+WYD+R++ F E ++EWTC ++W++L+ EV+ D
Sbjct: 181 VFLELFEECERVSY-VAVSVKQIWYDIRMRKDFAETIREWTCNVKELWRDLVVEVIGDYY 239
Query: 182 KLTIKELFQRVEFSR----GKKFE-----ECNVFSVLNGPDLYALMKSKPENSGDEVVSV 334
LT+ E+ + G+ FE +C + N + KPE + D + +
Sbjct: 240 TLTLSEVRPALNIPNNLLEGESFEPTDNVQCEATNQGNAFGSDIGISDKPEENADSLNLL 299
Query: 335 VESNRLDVMPLSALVKPTLEDE--------------------------EPCVSPPKLAIE 436
V + LV E E E S ++
Sbjct: 300 VTDQNCGSTSIIPLVDEEFEKENLLHEELESDKSQMVDVEFEKEILLHEELESDKNQMVD 359
Query: 437 ASCS-----NREKSCRRSRKVSEKSKHQVWISCDILP-EYCADAVEKYLEVYGKLSKTKN 598
+ E ++RK +SK +W ++ E+C + +++Y G SKT
Sbjct: 360 VEFEKDILLHEELESDKNRK-RRRSKSIIWKPLELSEVEFCPEVIDEY--ALGCRSKTVR 416
Query: 599 GNLLHDVTMKLRSHLLYLGWEVKSFQDKVG--RRWRYTQPDG-SRKCFRSLLTVCEHFRK 769
L K+R HL+YLGW ++ ++ RR+RY PD + K + S+ V + ++
Sbjct: 417 ELL----KTKVRKHLVYLGWTIEWTENNTPPHRRYRYKSPDKLNPKFYTSIFQVTKILQE 472
Query: 770 SGRAKVPPFLQDEQNRSSDAADPVILSPLVEQSQGCKNDAIKTSCVDDGGDVLF--EPEY 943
P Q + N S +DP + SQG ++ V F EPE+
Sbjct: 473 DPNMNSGP-PQIDSNLSHLLSDPP------QMSQGFN----VCPPTNEPSPVKFQVEPEF 521
Query: 944 CPLAVIDYYSLKIKINVQPSGHDKHKDMQLKAKKHLSAVGWQLYLMYKDNSQLREMR-YR 1120
CPLA++ YY ++ N DK K +LKAKKHL + GW M+ ++ R+ Y+
Sbjct: 522 CPLAIVKYYCHSLERN----SSDKRK-WKLKAKKHLLSEGW----MFDYPTERRKTTLYK 572
Query: 1121 SPSGKIYYSLQSACKGYLKENRDVWKLAERQLGGEGRCSSIETXXXXXXXXXXXXTSDVH 1300
SP + +LQ AC+ YLKE W ++ + SS+ T D
Sbjct: 573 SPQDQCLGTLQGACRLYLKEKIPEWTNSDHG-DDDDLLSSVSQLLQKEPELR---TIDGS 628
Query: 1301 PAICSRSSNSAEVS-------LNCAVTDGVLGARKRVREGVVSSTYYTNPQTILSWLIDN 1459
P R+ A S L V VL + KRV++ + SS Y PQ ILSWLID
Sbjct: 629 PPTAKRNHKRARTSKASTQKDLESEVLTRVLRSSKRVQKVLGSS--YQKPQNILSWLIDC 686
Query: 1460 NVVLPRDKVYCGRTRDDK--------TSEG----------------------THHQPSAH 1549
N+VLP+ KV+ T T EG ++ +PSA
Sbjct: 687 NIVLPKYKVFYWETEGGNSPMFEGRITREGIRCTCCQNLYGLSGFANHAGGSSNCRPSAC 746
Query: 1550 IYLEDGRSLLECQM 1591
I+L+DGRSLL+C M
Sbjct: 747 IFLKDGRSLLDCMM 760
>emb|CBI15934.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 162 bits (410), Expect = 2e-37
Identities = 166/561 (29%), Positives = 252/561 (44%), Gaps = 31/561 (5%)
Frame = +2
Query: 2 LFLELVSDFEKECWPLVVSVKQVWYDLRVKNGFDENLKEWTCCRSDVWKELLFEVVVDNV 181
LFLEL+ ++E++ WPL VS+KQ+WYD+R K GF E +KEWTC + +W+EL+ E + DN
Sbjct: 155 LFLELIEEYEQD-WPLNVSLKQIWYDVREKKGF-EKVKEWTCPSNALWRELVREAIADNF 212
Query: 182 KLTIKELFQRVEFSRGKKFEECNVFSVLNGPDLYALMKSKPENSGDEVVSVVESNRLDVM 361
++T+ ++ + + VF + P + + ++ D V+ VE++ LD M
Sbjct: 213 RITLNKICSML---------KPEVFQYTD-PKCSSNQHVQEKHEVDGVIPFVENSGLD-M 261
Query: 362 PLSALVKPTLEDEEPCVSPPKLAIEASCSNRE-------KSCRRSRKVSEKSKHQVW--I 514
P D+E V P L + S N+ KS S S K+ W +
Sbjct: 262 P--------YRDKEMSVQPQPLLVIPSKPNKLENFTFDCKSEGYSNNPSANRKND-WRRV 312
Query: 515 SCDIL--PEYCADAVEKYLEVYGKLSKTKNGNLLHDVTMKLRSHLLYLGWEVKSFQDKVG 688
DIL E C DA+ +Y + K N +T +R HL YLGW+++ F +K
Sbjct: 313 DTDILHGAESCFDAIIEYALISSGKRKPPN-----SLTENVRKHLSYLGWKIE-FMNKDF 366
Query: 689 RRWRYTQPDGSRKCFRSLLTVCEHFRKSGRAKVPPFLQDEQ----NRSSDAADPVI---- 844
R+RYT P+G K + SL VC+ R+ P QD+Q + D A P++
Sbjct: 367 PRFRYTSPEG--KTYLSLRQVCQDLRRPDAGIDSPISQDDQRSLLSPYDDLAFPLVKLQV 424
Query: 845 ---LSPLVEQSQGCKNDAIKTSCVDDGGDVLFEPEYCPLAVIDYYSLKIKINVQPSGHDK 1015
S L+E+SQ K S DD D+ + EYCP AV++YY L + S D
Sbjct: 425 NDLSSQLIEKSQVSKGKWTVPS-HDDRVDI--DHEYCPQAVVNYYFLGLDKKEHHSRKDD 481
Query: 1016 HKDMQL--KAKKHLSAVGWQLYLMYKDNSQLREMRYRSPSGKIYYSLQSACKGYLKENRD 1189
+ + L KAKKHLS +G + R P K + C LK +
Sbjct: 482 IRSLNLKSKAKKHLSFMG--------------DRELRHPKDK------NVCFSKLKNGKG 521
Query: 1190 VWKLAERQLGGEGRCSSIETXXXXXXXXXXXXTSDVHPAICSRSSNSAEVSLNCAVTDGV 1369
K R G +G + SSN+ L+ + + V
Sbjct: 522 S-KALMRLNGLDG-------------TRVLRSRKRARQVLIPGSSNNPRTILSWLIDNNV 567
Query: 1370 LGARKRVREGVVSSTYYTNPQTILSWLIDNNVVLPRDKVYC-------GRTRDDKTSEGT 1528
+ R +V SS +P + D + RD + C +R + + +
Sbjct: 568 VLPRAKVH---YSSRRDHHP------MADGRIT--RDGIKCSCCQEVFSLSRFEAHAGSS 616
Query: 1529 HHQPSAHIYLEDGRSLLECQM 1591
+H+ +A+I+LEDGRSLLECQM
Sbjct: 617 YHRSAANIFLEDGRSLLECQM 637
>ref|XP_003539338.1| PREDICTED: uncharacterized protein LOC100814680 [Glycine max]
Length = 1120
Score = 153 bits (386), Expect = 1e-34
Identities = 162/587 (27%), Positives = 254/587 (43%), Gaps = 57/587 (9%)
Frame = +2
Query: 2 LFLELVSDFEKECWPLVVSVKQVWYDLRVKNGFDENLKEWTCCRSDVWKELLFEVVVDNV 181
+FL+LV + +++ + + VS KQ+WYD+R+KNGF E ++EWTC +W+ L+ EV+ D +
Sbjct: 173 VFLDLVEEQKRKSF-VAVSAKQIWYDVRIKNGF-EKIREWTCNMKYLWRNLVMEVINDYL 230
Query: 182 KLTIKELFQRVEFSRGKKFEECNVFSVLNGPDLYALMKSKPENSGDEVVSVVESNRLDVM 361
LT+ E V VLN P ++L+ PE E ++ V+ +
Sbjct: 231 SLTVNE-----------------VILVLNLP--WSLLNEAPEPESVEAMASVD------L 265
Query: 362 PLSALVKPTLEDEEPCVSP-----PKLAIE-ASCSNREKSCRRSRKVSEKSKHQVWISCD 523
++ K + +EP V P PKL E C R K S + W
Sbjct: 266 SVTFPDKEIVVQKEP-VPPVKEVLPKLQKEIGPCGAFWSEESRENKSSTHLRSHYWKPLK 324
Query: 524 ILP-EYCADAVEKYLEVYGKLSKTKNGNLLHDVTMKLRSHLLYLGWEVKSFQDKVGRRWR 700
+ C DAV +YL + K KL+ HL+ LGW+++ +R+R
Sbjct: 325 LSEVALCPDAVREYLLAPNRADKAL-------WMEKLQKHLVCLGWKIEWSNKNNIKRYR 377
Query: 701 YTQPD-GSRKCFRSLLTVCEHFRKS-GRAKVPPFLQDEQNRSSDAADPVILSPLVEQSQG 874
Y PD +K + SL+ VC K G + LQ++Q+ D + + S+
Sbjct: 378 YNVPDKQGKKFYLSLIEVCRDMEKDPGTNSLQ--LQNDQSIVDPTVDCHLPDVPLNPSEN 435
Query: 875 CKN-----DAIKTSCVDDGGDVLFEPEYCPLAVIDYYSLKIKINVQPSGHDKHKDMQLKA 1039
+N I +S V+D +V P++CP AV YY I S DK K LKA
Sbjct: 436 IQNPDIFPPTISSSLVED--EVEDVPKFCPEAVEQYYRSYIS---NMSRADK-KQWILKA 489
Query: 1040 KKHLSAVGWQLYLMYKDNSQLREMRYRSPSGKIYYSLQSACKGYLKENRDVWKLAERQLG 1219
K HL A GW ++ ++ R + Y SP + + +L +AC+ + + + KLA +
Sbjct: 490 KNHLLAEGW-IFDYPPPTNKKRGIIYISPLNRRFPTLHAACRFCM--GKSISKLARSDM- 545
Query: 1220 GEGRCSSIETXXXXXXXXXXXXTSDVHPAICSRSSNSAEVSLNCAVTD-----------G 1366
S + +C + N SL + +
Sbjct: 546 KHLNVSGMNEENVDQVWSGDLVCRSAGNLVCRSAGNRKRKSLGNSKANIPKCQSNGLALR 605
Query: 1367 VLGARKRVREGVVSSTYYTNPQTILSWLIDNNVVLPRDKVYC---GRTR----------- 1504
VL ++KR ++ S P +LS+LIDN+++LPR KVY GR R
Sbjct: 606 VLRSKKRAQKVSAPSLINHKPLNVLSYLIDNSIILPRCKVYYKVKGRHRKVCTLADGKIT 665
Query: 1505 ------------------DDKTSEGTHHQPSAHIYLEDGRSLLECQM 1591
++ S + +PSA I+LEDGRSLL+CQ+
Sbjct: 666 RDGIKCNCCMGIYSFVGFENHASGSSTCRPSARIFLEDGRSLLDCQI 712
>ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|222850398|gb|EEE87945.1|
predicted protein [Populus trichocarpa]
Length = 978
Score = 135 bits (340), Expect = 3e-29
Identities = 154/612 (25%), Positives = 242/612 (39%), Gaps = 82/612 (13%)
Frame = +2
Query: 2 LFLELVSDFEKECWPLVVSVKQVWYDLRVKNGFDENLKEWTCCRSDVWKELLFEVVVDNV 181
LFL L+ ++E++ + + VS+KQ+WYDLR K F E L WT +W++L+ + DN+
Sbjct: 152 LFLVLIEEYEQKQY-IPVSIKQLWYDLREKESF-EKLGGWTSTVKALWRKLVLGAIDDNL 209
Query: 182 KLTIKELFQRVEFSRGKKFEECNVFSVLNGPDLYALMKSKPENSGDEVVSVVESNRLDVM 361
K+ + LFQ V+ PD +KP N ++RL +
Sbjct: 210 KVVVNHLFQ-----------------VIGIPDAAQQPIAKPVNDNSL------NDRLLLY 246
Query: 362 PLSALVKPTLEDEEP----------CVSPPKL-----------AIEASCSNREKSCRRSR 478
P V+ TL+ P C+ P L A+ + S+ S S
Sbjct: 247 PSCPTVESTLDRVVPKFSCEDDAIVCMKPRALFALPSNLDGIPAVSSITSDEGFSNSNSN 306
Query: 479 KVSEKSKHQVWISCDIL---------PEYCADAVEKYLEVYGKLSKTKNGNLLHDVTMKL 631
K++ S I L PE+C DA+ KY ++ +K G L+ DV
Sbjct: 307 KINGSSSGSACIQSSWLCAGSDIVPGPEFCPDAIIKYAKMG---NKKPTGTLIKDV---- 359
Query: 632 RSHLLYLGWEVKSFQDKVGRRWRYTQPDGSRKCFRSLLTVCEHFRKSGRAKVPPFLQDEQ 811
R HLL+ W+++S +DK R RYT PDG K + SL VC F + R + P + +Q
Sbjct: 360 RKHLLHQRWKIESMKDKGTSRLRYTSPDG--KLYHSLRQVCLDFCGADRGILSPTSEGKQ 417
Query: 812 NRSSDAADPVILSPLVEQSQGCKNDAIKTSCVDDGGDVLFEPEYCPLAVIDYYSLKIKIN 991
N + S L+EQ + ++ K +C D D+ E +
Sbjct: 418 NSLHTSHGD--SSSLIEQQED-RDPYYKGTCTDTSRDMEMEND----------------- 457
Query: 992 VQPSGHDKHKDMQLKAKKHLSAVGWQLYLMYKDNSQLREMRYRSPSGKIYYSLQSACKGY 1171
K + Q +K SA+ + K+ S+ +S+C
Sbjct: 458 ------SKTVEGQFSCEKIPSAICKTEFQKQKNCSK-----------------ESSCFSL 494
Query: 1172 LKENRDVWKLAERQLGGEGRCSSIETXXXXXXXXXXXXTSDVHPAICSRSSNSAEVSLNC 1351
K++ D+ E +H S + N++
Sbjct: 495 SKKHHDLH----------------EINVLTTRKARRKRKDSLHVETHSDAQNTSRPKSRS 538
Query: 1352 AVTD-GVLGAR---------------KRVREGVVSSTYYTNPQTILSWLIDNNVVLPRDK 1483
+T G++G+R KRV+ V + NP+T+LS LIDN++VLPR K
Sbjct: 539 GITSRGLIGSRNDKKHTKWVRVLRSSKRVQHVVAPDPSHHNPRTVLSLLIDNDIVLPRTK 598
Query: 1484 VYCGRTRD-DKTSEG-----------------------------------THHQPSAHIY 1555
V+ G +D + T EG + +P+A I+
Sbjct: 599 VHYGSQKDRNPTVEGRIARDGIKCSCCGKVYTLSGFELHAGIKSCRSGASKYCKPAASIF 658
Query: 1556 LEDGRSLLECQM 1591
L+DGRSLLECQ+
Sbjct: 659 LDDGRSLLECQI 670