BLASTX nr result

ID: Bupleurum21_contig00009538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009538
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|AFK33705.1| unknown [Medicago truncatula]                           77   1e-12
gb|ACJ83789.1| unknown [Medicago truncatula]                           77   1e-12
ref|XP_003624861.1| Alpha-L-arabinofuranosidase [Medicago trunca...    77   1e-12
dbj|BAD95302.1| putative alpha-L-arabinofuranosidase [Arabidopsi...    76   2e-12

>ref|XP_002322584.1| predicted protein [Populus trichocarpa] gi|222867214|gb|EEF04345.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/57 (70%), Positives = 45/57 (78%)
 Frame = -1

Query: 334 SSSKKTVLTSTNLMDENSFGQPNKVAPVKFDLENADRNMDVVLSPHSFTSIDLLTVS 164
           S S KTVLTS+NLMDENSF  P KV P +  LENAD++MDVVLSP+S TS DLLT S
Sbjct: 595 SGSTKTVLTSSNLMDENSFANPKKVVPAQTMLENADKDMDVVLSPYSLTSFDLLTES 651


>gb|AFK33705.1| unknown [Medicago truncatula]
          Length = 179

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = -1

Query: 334 SSSKKTVLTSTNLMDENSFGQPNKVAPVKFDLENADRNMDVVLSPHSFTSIDLLTVSTIT 155
           S S KTVLTSTNLMDENSF QP KV P++  L++  ++M+V++ PHSFTS DLL  S+  
Sbjct: 107 SGSTKTVLTSTNLMDENSFSQPKKVIPIQSLLQSVGKDMNVIVPPHSFTSFDLLKESSNL 166

Query: 154 PWTAGDDSSYIS 119
                D SS+ S
Sbjct: 167 KMLESDSSSWSS 178


>gb|ACJ83789.1| unknown [Medicago truncatula]
          Length = 179

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = -1

Query: 334 SSSKKTVLTSTNLMDENSFGQPNKVAPVKFDLENADRNMDVVLSPHSFTSIDLLTVSTIT 155
           S S KTVLTSTNLMDENSF QP KV P++  L++  ++M+V++ PHSFTS DLL  S+  
Sbjct: 107 SGSTKTVLTSTNLMDENSFSQPKKVIPIQSLLQSVGKDMNVIVPPHSFTSFDLLKESSNL 166

Query: 154 PWTAGDDSSYIS 119
                D SS+ S
Sbjct: 167 KMLESDSSSWSS 178


>ref|XP_003624861.1| Alpha-L-arabinofuranosidase [Medicago truncatula]
           gi|296882314|gb|ADH83380.1| alpha-L-arabinofuranosidase
           [Medicago truncatula] gi|355499876|gb|AES81079.1|
           Alpha-L-arabinofuranosidase [Medicago truncatula]
          Length = 672

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = -1

Query: 334 SSSKKTVLTSTNLMDENSFGQPNKVAPVKFDLENADRNMDVVLSPHSFTSIDLLTVSTIT 155
           S S KTVLTSTNLMDENSF QP KV P++  L++  ++M+V++ PHSFTS DLL  S+  
Sbjct: 600 SGSTKTVLTSTNLMDENSFSQPKKVIPIQSLLQSVGKDMNVIVPPHSFTSFDLLKESSNL 659

Query: 154 PWTAGDDSSYIS 119
                D SS+ S
Sbjct: 660 KMLESDSSSWSS 671


>dbj|BAD95302.1| putative alpha-L-arabinofuranosidase [Arabidopsis thaliana]
          Length = 392

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/73 (57%), Positives = 48/73 (65%)
 Frame = -1

Query: 334 SSSKKTVLTSTNLMDENSFGQPNKVAPVKFDLENADRNMDVVLSPHSFTSIDLLTVSTIT 155
           S SKKTVLTSTN+MDENSF QP KV P +  LE A+ +M VVL PHSF+S DLL  S   
Sbjct: 317 SGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKI 376

Query: 154 PWTAGDDSSYIST 116
                D SS+  T
Sbjct: 377 RMPISDSSSHQKT 389


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