BLASTX nr result
ID: Bupleurum21_contig00009493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009493
(2152 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu... 364 6e-98
gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron... 363 8e-98
gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron... 360 6e-97
ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|2... 353 1e-94
ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR... 351 5e-94
>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
gi|223548632|gb|EEF50123.1| zinc finger protein, putative
[Ricinus communis]
Length = 735
Score = 364 bits (934), Expect = 6e-98
Identities = 194/364 (53%), Positives = 238/364 (65%), Gaps = 32/364 (8%)
Frame = +2
Query: 347 LPCDTNGECMACKNMACEEDTLTCNTCATPWHLPCLGNT--FPGHASSWDCPDCSSLPDQ 520
LPCD +G CM CK +D+LTC TC TPWHL CL + A W+CPDCS L +
Sbjct: 7 LPCDGDGICMICKTKPSPDDSLTCRTCDTPWHLTCLSSPPETSADALQWNCPDCSIL-NP 65
Query: 521 PMSSVSYPTLA------------VDPSEKDKGKRPQYLVS--PPNINA-----DDVVNNN 643
+S S T + V SE +K KR Q LVS P+ + + + +N
Sbjct: 66 TLSRGSEATSSALIAAIRMIESDVSLSESEKAKRRQQLVSGGAPSCSGVEEEKERITGSN 125
Query: 644 QVLGLLEENLKCSFCMQLPQSPVTTLCGHNFCLKCFQKWVGQGKRTCAKCRSAIPPKMAS 823
++L +L+ CSFCMQLP PVTT CGHNFCLKCFQKW+GQGKRTCA CR+ IP KMAS
Sbjct: 126 EILDILDAGFNCSFCMQLPDRPVTTPCGHNFCLKCFQKWIGQGKRTCANCRNQIPSKMAS 185
Query: 824 NPCINSSLVLAIQIAQCSPLK---GPARSYDFVQSQNQPCQTYSNDSAKIAGKEK---GS 985
P INS LV+AI++A+ S GP + Y FV +QN+P + ++++ AK AGK G
Sbjct: 186 QPRINSVLVIAIRMAKMSKSSTAGGPHKVYHFVHNQNRPDKAFTSERAKKAGKSNACSGK 245
Query: 986 IFVTVPPNHFGPILAENDPLRNQGVLVGDIWESWIECRQWGAHISQSEGISGQSDYGAQS 1165
IFVTVPP+HFGPILAENDP+R QGVLVG+ WE +ECRQWGAH+ GI+GQS +GAQS
Sbjct: 246 IFVTVPPDHFGPILAENDPVREQGVLVGESWEDRLECRQWGAHLPHVAGIAGQSTHGAQS 305
Query: 1166 VAFSSSNEDVEDHGDWFLYT---GRDLLKSGETSK--QFYQKVETLNEALHISFQKGYPV 1330
VA S D EDHGDWFLYT GRDL + T+K F QK E LNEAL +S +KGYP+
Sbjct: 306 VALSGGYVDDEDHGDWFLYTGSGGRDLSGNKRTNKAQSFDQKFEKLNEALRVSCRKGYPL 365
Query: 1331 RVVR 1342
RVVR
Sbjct: 366 RVVR 369
Score = 82.8 bits (203), Expect = 3e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2
Query: 1994 RLQRKKLPSYAPTTGIRYDGIYRIEKCWLKVCNDGCKVSQYLFVRCDNDPAPW 2152
R ++K SYAP TG+RYDGIYRIEKCW K G KV +YLFVRCDN+PAPW
Sbjct: 369 RSHKEKRSSYAPETGVRYDGIYRIEKCWRKNGMQGYKVCRYLFVRCDNEPAPW 421
>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
Length = 713
Score = 363 bits (933), Expect = 8e-98
Identities = 198/367 (53%), Positives = 242/367 (65%), Gaps = 35/367 (9%)
Frame = +2
Query: 347 LPCDTNGECMACKNMACEEDTLTCNTCATPWHLPCLGNTFPGHASS--WDCPDCSSLPD- 517
LPCD +G CM CK +E+ L CNTCATPWH+PCL + +S+ W+CPDCS P
Sbjct: 7 LPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSV 66
Query: 518 --QPMSSVS----------YPTLAVDPS--EKDKGKRPQYLVSPPNINADD-------VV 634
+P SV+ + D S +++K +R Q L+S ++ D
Sbjct: 67 DSKPAPSVAGSLSNDLISAVRAIEADESLNDEEKARRRQELMSGGARSSGDGDEKKREKG 126
Query: 635 NNNQVLGLLEENLKCSFCMQLPQSPVTTLCGHNFCLKCFQKWVGQGKRTCAKCRSAIPPK 814
N VL LL+ +L CSFCMQLP+ PVTT CGHNFCLKCFQKWV QGKRTCAKCR IPPK
Sbjct: 127 GNGGVLDLLDGSLNCSFCMQLPERPVTTPCGHNFCLKCFQKWVAQGKRTCAKCRHTIPPK 186
Query: 815 MASNPCINSSLVLAIQIAQC--SPLKGPA-RSYDFVQSQNQPCQTYSNDSAKIAGKEK-- 979
MAS P INS+LV+AI++A+ S G + FV +QN+P + ++ + AK AGK
Sbjct: 187 MASQPRINSALVVAIRMARTEKSATSGATLKPLPFVHNQNRPDKAFTTERAKRAGKANAC 246
Query: 980 -GSIFVTVPPNHFGPILAENDPLRNQGVLVGDIWESWIECRQWGAHISQSEGISGQSDYG 1156
G IFVTVPP+HFGPI AENDP RNQGVLVG+ WE +ECRQWGAH+ GI+GQSDYG
Sbjct: 247 SGKIFVTVPPDHFGPIPAENDPERNQGVLVGESWEDRMECRQWGAHLPHVAGIAGQSDYG 306
Query: 1157 AQSVAFSSSNEDVEDHGDWFLYT---GRDLLKSGETSKQ--FYQKVETLNEALHISFQKG 1321
AQSVA S ED EDHG+WFLYT GRDL + T+K+ F QK E LNEAL +S +KG
Sbjct: 307 AQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNRRTNKEQSFDQKFEKLNEALRVSCKKG 366
Query: 1322 YPVRVVR 1342
YPVRVVR
Sbjct: 367 YPVRVVR 373
Score = 85.1 bits (209), Expect = 7e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2
Query: 1994 RLQRKKLPSYAPTTGIRYDGIYRIEKCWLKVCNDGCKVSQYLFVRCDNDPAPW 2152
R ++K SYAP TG+RYDGIYRIEKCW KV G KV +YLFVRCDN+PAPW
Sbjct: 373 RSHKEKRSSYAPETGVRYDGIYRIEKCWRKVGVQGFKVCRYLFVRCDNEPAPW 425
>gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
Length = 713
Score = 360 bits (925), Expect = 6e-97
Identities = 197/367 (53%), Positives = 241/367 (65%), Gaps = 35/367 (9%)
Frame = +2
Query: 347 LPCDTNGECMACKNMACEEDTLTCNTCATPWHLPCLGNTFPGHASS--WDCPDCSSLPD- 517
LPCD +G CM CK +E+ L CNTCATPWH+PCL + +S+ W+CPDCS P
Sbjct: 7 LPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSV 66
Query: 518 --QPMSSVS----------YPTLAVDPS--EKDKGKRPQYLVSPPNINADD-------VV 634
+P SV+ + D S +++K +R Q L+S ++ D
Sbjct: 67 DSKPAPSVAGSLSNDLISAVRAIEADESLNDEEKARRRQELMSGGARSSGDGDEKKREKG 126
Query: 635 NNNQVLGLLEENLKCSFCMQLPQSPVTTLCGHNFCLKCFQKWVGQGKRTCAKCRSAIPPK 814
N VL LL+ +L CSFCMQLP+ PVTT CGHNFCLKCFQKWV QGKRTCAKCR IP K
Sbjct: 127 GNGGVLDLLDGSLNCSFCMQLPERPVTTPCGHNFCLKCFQKWVAQGKRTCAKCRHTIPTK 186
Query: 815 MASNPCINSSLVLAIQIAQC--SPLKGPA-RSYDFVQSQNQPCQTYSNDSAKIAGKEK-- 979
MAS P INS+LV+AI++A+ S G + FV +QN+P + ++ + AK AGK
Sbjct: 187 MASQPRINSALVVAIRMARTEKSATSGATLKPLPFVHNQNRPDKAFTTERAKRAGKANAC 246
Query: 980 -GSIFVTVPPNHFGPILAENDPLRNQGVLVGDIWESWIECRQWGAHISQSEGISGQSDYG 1156
G IFVTVPP+HFGPI AENDP RNQGVLVG+ WE +ECRQWGAH+ GI+GQSDYG
Sbjct: 247 SGKIFVTVPPDHFGPIPAENDPERNQGVLVGESWEDRMECRQWGAHLPHVAGIAGQSDYG 306
Query: 1157 AQSVAFSSSNEDVEDHGDWFLYT---GRDLLKSGETSKQ--FYQKVETLNEALHISFQKG 1321
AQSVA S ED EDHG+WFLYT GRDL + T+K+ F QK E LNEAL +S +KG
Sbjct: 307 AQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNRRTNKEQSFDQKFEKLNEALRVSCKKG 366
Query: 1322 YPVRVVR 1342
YPVRVVR
Sbjct: 367 YPVRVVR 373
Score = 85.1 bits (209), Expect = 7e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2
Query: 1994 RLQRKKLPSYAPTTGIRYDGIYRIEKCWLKVCNDGCKVSQYLFVRCDNDPAPW 2152
R ++K SYAP TG+RYDGIYRIEKCW KV G KV +YLFVRCDN+PAPW
Sbjct: 373 RSHKEKRSSYAPETGVRYDGIYRIEKCWRKVGVQGFKVCRYLFVRCDNEPAPW 425
>ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|222846612|gb|EEE84159.1|
predicted protein [Populus trichocarpa]
Length = 638
Score = 353 bits (905), Expect = 1e-94
Identities = 191/367 (52%), Positives = 233/367 (63%), Gaps = 35/367 (9%)
Frame = +2
Query: 347 LPCDTNGECMACKNMACEEDTLTCNTCATPWHLPCLGNTFP----GHASSWDCPDCSSLP 514
LPCD G CMACKN E+TL C TCATPWH CL +P W+CPDCS +
Sbjct: 3 LPCDGAGICMACKNKPPNEETLNCKTCATPWHATCL--VYPPQELADTLQWECPDCSMIN 60
Query: 515 DQPMSSV-------------SYPTLAVDPS--EKDKGKRPQYLVS-----PPNINADDVV 634
S+V S + D S E++K K+ Q L+S P + D+
Sbjct: 61 PPSTSAVAAGRSEEAGELIASIRKIEDDKSLTEQEKAKKRQKLLSGATAGPSPSDGDEKK 120
Query: 635 NNNQVLGLLEENLKCSFCMQLPQSPVTTLCGHNFCLKCFQKWVGQGKRTCAKCRSAIPPK 814
N VL +L++ L CSFCMQ+ PVTT CGHNFCLKCFQ+W+GQGKRTCA CR IPPK
Sbjct: 121 EKNDVLDILDKELTCSFCMQMLDRPVTTPCGHNFCLKCFQRWIGQGKRTCAYCRVQIPPK 180
Query: 815 MASNPCINSSLVLAIQIAQCSPLK---GPARSYDFVQSQNQPCQTYSNDSAKIAGKEK-- 979
MAS P INS+LV+AI++A+ S G + Y FVQ+QN+P + Y+ + AK AGK
Sbjct: 181 MASQPRINSTLVIAIRMARMSRSSNAGGAPKVYHFVQNQNRPDKAYTTERAKRAGKANAC 240
Query: 980 -GSIFVTVPPNHFGPILAENDPLRNQGVLVGDIWESWIECRQWGAHISQSEGISGQSDYG 1156
G IFVTVPP+HFGPI AENDP RN GVLVG+IWE + CRQWGAH+ GI+GQS +G
Sbjct: 241 SGKIFVTVPPDHFGPIPAENDPERNMGVLVGEIWEDRLACRQWGAHLPHVAGIAGQSTHG 300
Query: 1157 AQSVAFSSSNEDVEDHGDWFLYT---GRDLLKSGETSK--QFYQKVETLNEALHISFQKG 1321
+QSVA S D EDHG+WFLYT GRDL + T+K F QK + +NEAL +S KG
Sbjct: 301 SQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTNKDQSFDQKFDKMNEALRVSCLKG 360
Query: 1322 YPVRVVR 1342
YPVRVVR
Sbjct: 361 YPVRVVR 367
Score = 82.0 bits (201), Expect = 6e-13
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2
Query: 1994 RLQRKKLPSYAPTTGIRYDGIYRIEKCWLKVCNDGCKVSQYLFVRCDNDPAPW 2152
R ++K SYAP TG+RYDG+YRIEKCW K G KV +YLFVRCDN+PAPW
Sbjct: 367 RSHKEKRSSYAPETGVRYDGVYRIEKCWRKNGIQGFKVCRYLFVRCDNEPAPW 419
>ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
sativus]
Length = 608
Score = 351 bits (900), Expect = 5e-94
Identities = 190/368 (51%), Positives = 235/368 (63%), Gaps = 36/368 (9%)
Frame = +2
Query: 347 LPCDTNGECMACKNMACEEDTLTCNTCATPWHLPCLGNTFPGHASS--WDCPDCSSLPDQ 520
LPCD +G CM C + + +T+TC TC TPWH+PCL N S+ WDCPDCS LP Q
Sbjct: 8 LPCDGDGICMLCHSKPSDLETITCKTCVTPWHVPCLSNPPETLESTLQWDCPDCS-LPSQ 66
Query: 521 P--MSSVSYPTLAVDPS-----------------EKDKGKRPQYLVSPPNINAD-DVVNN 640
+ S L + PS + DK K+ Q L++ +++ + + VN
Sbjct: 67 DALLPPPSNSPLPIHPSNDLIAAIRAIEADSSLADSDKAKKRQQLLTGNSLSHEINDVNT 126
Query: 641 NQ---VLGLLEENLKCSFCMQLPQSPVTTLCGHNFCLKCFQKWVGQGKRTCAKCRSAIPP 811
Q VL L +E L CSFC+QLP PVTT CGHNFCLKCFQKW+G GK+TCAKCR IP
Sbjct: 127 KQGDDVLDLFDERLNCSFCIQLPDRPVTTPCGHNFCLKCFQKWIGLGKKTCAKCRCVIPT 186
Query: 812 KMASNPCINSSLVLAIQIAQCSPLK---GPARSYDFVQSQNQPCQTYSNDSAKIAGKEK- 979
KMAS P INS+LV+AI++A+ S GP ++Y FV +QN+P + Y+ D A+ GK
Sbjct: 187 KMASQPRINSTLVVAIRMAKLSKSSVSGGPQKAYHFVHNQNRPDKAYTTDRAQKKGKANA 246
Query: 980 --GSIFVTVPPNHFGPILAENDPLRNQGVLVGDIWESWIECRQWGAHISQSEGISGQSDY 1153
G IFVT+P +HFGPI AENDP RNQGVLVG+ WE +ECRQWGAH GI+GQS+
Sbjct: 247 ASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNN 306
Query: 1154 GAQSVAFSSSNEDVEDHGDWFLYT---GRDLLKSGETSK--QFYQKVETLNEALHISFQK 1318
GAQSV S +D EDHG+WFLYT GRDL + TSK F QK E N+AL +S K
Sbjct: 307 GAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKYNKALQVSCLK 366
Query: 1319 GYPVRVVR 1342
GYPVRVVR
Sbjct: 367 GYPVRVVR 374
Score = 84.0 bits (206), Expect = 2e-13
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +2
Query: 1994 RLQRKKLPSYAPTTGIRYDGIYRIEKCWLKVCNDGCKVSQYLFVRCDNDPAPW 2152
R ++K SYAP G+RYDGIYRIEKCW KV G KV +YLFVRCDNDPAPW
Sbjct: 374 RSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPW 426