BLASTX nr result

ID: Bupleurum21_contig00009470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009470
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03413.1| EDGP precursor [Daucus carota]                        204   8e-51
pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p...   204   8e-51
pdb|3VLA|A Chain A, Crystal Structure Of Edgp                         204   8e-51
ref|XP_002277699.1| PREDICTED: basic 7S globulin-like [Vitis vin...   191   9e-47
ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46

>dbj|BAA03413.1| EDGP precursor [Daucus carota]
          Length = 433

 Score =  204 bits (519), Expect = 8e-51
 Identities = 100/116 (86%), Positives = 110/116 (94%)
 Frame = -1

Query: 553 RNITRVASVAPFGACFSTNNVGSTRVGPAVPYIELVLQSQSVVWTITGSNSMVYINDNVL 374
           RNITRVASVAPFGACFST+N+ STR+GP+VP I+LVLQS+SVVWTITGSNSMVYINDNV+
Sbjct: 318 RNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVV 377

Query: 373 CLGVVDGGLNPRTSIVIGGHQLEDNLLQFDLATSRLGFSNTLLGRQTTCANFNFTS 206
           CLGVVDGG N RTSIVIGGHQLEDNL+QFDLATSR+GFS TLLG +TTCANFNFTS
Sbjct: 378 CLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS 433


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C
           Chain C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score =  204 bits (519), Expect = 8e-51
 Identities = 100/116 (86%), Positives = 110/116 (94%)
 Frame = -1

Query: 553 RNITRVASVAPFGACFSTNNVGSTRVGPAVPYIELVLQSQSVVWTITGSNSMVYINDNVL 374
           RNITRVASVAPFGACFST+N+ STR+GP+VP I+LVLQS+SVVWTITGSNSMVYINDNV+
Sbjct: 298 RNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVV 357

Query: 373 CLGVVDGGLNPRTSIVIGGHQLEDNLLQFDLATSRLGFSNTLLGRQTTCANFNFTS 206
           CLGVVDGG N RTSIVIGGHQLEDNL+QFDLATSR+GFS TLLG +TTCANFNFTS
Sbjct: 358 CLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS 413


>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
          Length = 413

 Score =  204 bits (519), Expect = 8e-51
 Identities = 100/116 (86%), Positives = 110/116 (94%)
 Frame = -1

Query: 553 RNITRVASVAPFGACFSTNNVGSTRVGPAVPYIELVLQSQSVVWTITGSNSMVYINDNVL 374
           RNITRVASVAPFGACFST+N+ STR+GP+VP I+LVLQS+SVVWTITGSNSMVYINDNV+
Sbjct: 298 RNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVV 357

Query: 373 CLGVVDGGLNPRTSIVIGGHQLEDNLLQFDLATSRLGFSNTLLGRQTTCANFNFTS 206
           CLGVVDGG N RTSIVIGGHQLEDNL+QFDLATSR+GFS TLLG +TTCANFNFTS
Sbjct: 358 CLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS 413


>ref|XP_002277699.1| PREDICTED: basic 7S globulin-like [Vitis vinifera]
          Length = 435

 Score =  191 bits (484), Expect = 9e-47
 Identities = 92/116 (79%), Positives = 106/116 (91%)
 Frame = -1

Query: 547 ITRVASVAPFGACFSTNNVGSTRVGPAVPYIELVLQSQSVVWTITGSNSMVYINDNVLCL 368
           ITRVASV+PFGACFS+ ++GSTRVGPAVP I+LVLQ QSV W + G+NSMV ++DNVLCL
Sbjct: 320 ITRVASVSPFGACFSSKDIGSTRVGPAVPPIDLVLQRQSVYWRVFGANSMVQVSDNVLCL 379

Query: 367 GVVDGGLNPRTSIVIGGHQLEDNLLQFDLATSRLGFSNTLLGRQTTCANFNFTSSA 200
           G VDGG+NPRTSIVIGG QLEDNLLQFDLATSRLGFS++LL RQTTC+NFNFTS+A
Sbjct: 380 GFVDGGVNPRTSIVIGGRQLEDNLLQFDLATSRLGFSSSLLSRQTTCSNFNFTSNA 435


>ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|222854960|gb|EEE92507.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/115 (79%), Positives = 104/115 (90%)
 Frame = -1

Query: 550 NITRVASVAPFGACFSTNNVGSTRVGPAVPYIELVLQSQSVVWTITGSNSMVYINDNVLC 371
           N+ RVASVAPFGACF++ N+GSTRVGPAVP I+LVLQS++V W I G+NSMV + D+VLC
Sbjct: 302 NVPRVASVAPFGACFNSKNIGSTRVGPAVPQIDLVLQSKNVYWRIFGANSMVQVKDDVLC 361

Query: 370 LGVVDGGLNPRTSIVIGGHQLEDNLLQFDLATSRLGFSNTLLGRQTTCANFNFTS 206
           LG VDGG+NPRTSIVIGGHQLEDNLLQFDLA SRLGFS++LL RQTTCANFNFTS
Sbjct: 362 LGFVDGGVNPRTSIVIGGHQLEDNLLQFDLAASRLGFSSSLLFRQTTCANFNFTS 416


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