BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009462
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, c...    76   2e-11
ref|YP_006351556.1| hypothetical protein HFX_6451 [Haloferax med...    65   5e-08
ref|XP_001349264.1| ubiquitin-protein ligase 1, putative [Plasmo...    63   1e-07
emb|CAC51118.1| putative bifunctional autolysin [Staphylococcus ...    63   2e-07
ref|XP_001328312.1| hypothetical protein [Trichomonas vaginalis ...    62   3e-07

>ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, chloroplastic-like [Vitis
            vinifera]
          Length = 1318

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 99/394 (25%), Positives = 162/394 (41%), Gaps = 23/394 (5%)
 Frame = +1

Query: 49   VMDNGVGTFEGSGLGEQEGFKSENFELKVEKIDMEGLSETKDLEGDEVFEEASD----VE 216
            VM+NGV   + S LGE +G     FE +V +  + G  E+KD EGDE+FEEA D    +E
Sbjct: 43   VMENGVEAIDISHLGEMKGVDDRVFEERVGEGVVSGSDESKDSEGDEIFEEAVDHPMKLE 102

Query: 217  VTSVEKINVGDSFVADTDR-------MSVENEVDKFEEAVEEHSYEMEEGVETADNGVEK 375
              +V     GD  V D          ++V +E + FEEA+   S E+    +    GVE 
Sbjct: 103  SGNVVVDEDGDGKVIDDSESVGIDGNLNVGHEGETFEEAIGV-SGEVRNSEQAVAGGVEA 161

Query: 376  EA----DRDELTPSGTDRVVDNGKDVVKEVPDLVTASVGVSEYGSGDSKDSTVVIEGSEI 543
            E     DR+ +   G    +D      + V D +T  V   E    +  D+ +  +G   
Sbjct: 162  EVEGLVDREGVDGVGKVNNIDQESISKEVVTDDLTGLVDSEEDKGKEVSDAGM--DGGMD 219

Query: 544  VFPSSNNQKEDQSVILESSDNGIIGKHEPQLYRDIKKVDVNEEGEGALSHISEKKNDISG 723
            +    N   E  SV+LE S+N                 D+N E   A  +    +++  G
Sbjct: 220  LLKDGNKVDEVFSVVLEKSENK-------------DSDDLNLEARPAYENSENGESNKVG 266

Query: 724  KNDKDLTMSEIYETSTHRQYDINEDLNNVPDGSKCDEKADMVEDLVDIVSDDGI--DVKS 897
            KN  D          +  +++ N    +  + S+     D+    ++    DG   + K+
Sbjct: 267  KNGID----------SDHEHEANGGFLHEDNKSE-----DLKTSTLNTEHQDGESGEPKN 311

Query: 898  SGVALQNWQNGVSFSKVLNSNGFAGVEHDSQLQEAGSSGEKPN---RIDNGKLNNL---H 1059
            +   +   +N      VL+       E   +L+ A S+ E  +   +  N  L +L   H
Sbjct: 312  TSSGVSKGENQKEDQPVLDME--CKNEESGELKGASSNAEYVDGKYQEANDSLTSLDADH 369

Query: 1060 QDDNNRDMEDILTGKNSVQQAERPSKEVGNLKME 1161
            QDDNN ++   L  ++   + E   + + NL  E
Sbjct: 370  QDDNNVELRVSLGSRHGEDKGEEQGETLANLVTE 403


>ref|YP_006351556.1| hypothetical protein HFX_6451 [Haloferax mediterranei ATCC 33500]
            gi|448619049|ref|ZP_21666986.1| hypothetical protein
            C439_17403 [Haloferax mediterranei ATCC 33500]
            gi|388246626|gb|AFK21569.1| hypothetical protein HFX_6451
            [Haloferax mediterranei ATCC 33500]
            gi|445745655|gb|ELZ97121.1| hypothetical protein
            C439_17403 [Haloferax mediterranei ATCC 33500]
          Length = 514

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 2/277 (0%)
 Frame = +1

Query: 58   NGVGTFEGSGLGEQEGFKSENFELKVEKIDMEGLSETKDLEGDEVFEEASDVEVTSVEKI 237
            NG+   +     E E     +FE   ++++ E      DLE  +   +A+D+E    E  
Sbjct: 270  NGIEVEQDGDDAEVEDENGFDFENDGDRLEFEDAGGLVDLEATD---DATDIEFDGGEIE 326

Query: 238  NVGDSFVADTDRMSVENEVDKFEEAVEEHSYEMEEGVETADNGVEKEADRDELTPSGTDR 417
             + D+   +TD +  EN+ D+ E   ++H  E +      D+ V+ E D D++    T  
Sbjct: 327  QLDDALDVETDEVDFENDGDEVEFETDDHDIEQD------DDDVDVEDDEDDIDFEST-- 378

Query: 418  VVDNGKDVVKEVPDLVTASVGVSEYGSGDSKDSTVVIEGSEIVFPSSNNQKEDQSVILES 597
              D G DV     +  TA  G+ +    D  D  V     +I F     + +D  V  E+
Sbjct: 379  --DGGDDV-----EFETADHGIEQ----DDDDLEVEDHEDDIDF-----ENDDDEVEFET 422

Query: 598  SDNGIIGKHEPQLYRDIKKVDVNEEGEGALSHIS-EKKNDIS-GKNDKDLTMSEIYETST 771
             D+ I  + +     D++  D+  E +G    +  +K  DI  G    DLT  EI E  T
Sbjct: 423  DDHDIEQRGDAV---DVEIDDLELESDGETVDLERDKHEDIEVGAFLDDLTRDEIIELGT 479

Query: 772  HRQYDINEDLNNVPDGSKCDEKADMVEDLVDIVSDDG 882
                D  +DL ++      D++ +M+E +   +SD G
Sbjct: 480  ETGADDLDDLADMDIDELDDDEIEMLESM---LSDGG 513


>ref|XP_001349264.1| ubiquitin-protein ligase 1, putative [Plasmodium falciparum 3D7]
            gi|23499033|emb|CAD51113.1| ubiquitin-protein ligase 1,
            putative [Plasmodium falciparum 3D7]
          Length = 8591

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 86/339 (25%), Positives = 131/339 (38%), Gaps = 12/339 (3%)
 Frame = +1

Query: 136  EKIDMEGLSETKDLEGDEVFEEASDVEVTSVEKINVGDSFVADTDRMSVENEVDKFEEAV 315
            E  DM    E  D+E D+      DVE    E + V D    D D    E +VD+ EE V
Sbjct: 5027 ENNDMSNNDEENDVERDD-----EDVEGDDDEDVEVDDDEEVDVDEDEEEVDVDEDEEEV 5081

Query: 316  EEHSYEMEEGVETADNGVEKEADRDELTPSGTDRVVDNGKDVVKEVPDLVTASVGVSEYG 495
            EE   +ME   +  D+  + + + DE      D V D   D V +  D     V   EY 
Sbjct: 5082 EEMDDDMENEDDDEDDIDDDDDEDDEEDVEDDDEVDDEVDDEVDDEVD--DEEVLDDEYD 5139

Query: 496  SGDSKDSTVVIEGSEIVFPSSNNQKEDQSVILESSDNGIIGKHEPQLY---RDIKKVDVN 666
              D +D       S  V  + NN+       L    N I    E Q+Y    D+      
Sbjct: 5140 EIDIEDEDAAERNSNEV--NDNNRNVHVHAYLVQDRNEI---DEDQIYDNSNDLLLPHEV 5194

Query: 667  EEGEGALSHISEKKNDISGKND-KDLTMSEIYETSTHRQYDIN------EDLNNVPDGSK 825
            +E E  LS++ +  N+I  + D    + +++ E + HR  +I+      ED +   D   
Sbjct: 5195 DENEEILSNMDDNNNNIVSRLDLVSDSSNDMDEQNVHRIREIDETEEDEEDDDGEDDEED 5254

Query: 826  CDEKADMVEDLVDIVSDDGIDVKSSGVALQNWQNGVSFSKVLNSNGFAGVEHDSQLQEAG 1005
             DE  +  +D  D   DDG D           +    +  V   +G      + +L    
Sbjct: 5255 DDEDDEEDDDEDDDDEDDGEDDDEEDDEEDEDEGEEEYEDVEEEDG-----DEEELHINN 5309

Query: 1006 SSGEKPNRIDNGKLNNLHQD--DNNRDMEDILTGKNSVQ 1116
            S+      +DN + NN + D  DN  ++ + L   N  Q
Sbjct: 5310 STYNVNQNVDNIRSNNNNTDLIDNEINVNNSLLNCNENQ 5348


>emb|CAC51118.1| putative bifunctional autolysin [Staphylococcus xylosus]
          Length = 1564

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 84/432 (19%), Positives = 171/432 (39%), Gaps = 51/432 (11%)
 Frame = +1

Query: 136  EKIDMEGLSETKDLEGDEVFEEASDVEVTSVEKINVGDSFVAD-----TDRMSVENEVDK 300
            E+I  E    T ++ G +V+++ + ++  S +     D+ + +     +D+M+ +N  ++
Sbjct: 54   EQIKSEISKPTANISGTQVYKDPTQIKQASTDNNLNYDAQIDELNNQTSDQMTTQNTYNQ 113

Query: 301  FEEAVEEHSYEMEEGVETADNGVEKEADRDELTPSGTDRVVDNGKDVVKEVPDLVTASVG 480
              +  E    + +  V+T    VE E   DE T +     V+   +V K+  + V     
Sbjct: 114  NGQDQEAQQKD-DSTVKTNQENVENEITSDEATNN-----VNTSDNVEKQATEAVQNDSV 167

Query: 481  VSEYGSGDSKDSTVVIEG----SEIVFPSSNNQKEDQSVILESSDNGIIGKHEPQLYRDI 648
            V++     S DS  V +      +      NN  ++ SV+ +  D  +       + +D 
Sbjct: 168  VTDKDDVTSNDSQDVAKDINKFDDTSVEQDNNAVQNDSVVTDKDD--VTSNDSQDVTKDS 225

Query: 649  KKVDV--NEEGEGALSHIS--EKKNDISGKNDKDLTMSEIYETSTHRQYDIN----EDLN 804
             K D   +E+G  A+ + S    K+D++  + +D+T       +T  + D N    ++  
Sbjct: 226  DKSDAASSEQGNNAVQNDSVVTDKDDVTSNDSQDVTKDSDKSDATSNEQDSNAVQQDNSA 285

Query: 805  NVPDGSKCDEKADMVEDLV------------------------DIVSDDGIDVKSSGV-- 906
            +  D    D+  D+ +D V                        D++SDD  DV    V  
Sbjct: 286  SDKDDVTSDDSQDVAKDSVKSDAASNEQDSNAVQNGSAVTDKDDVISDDSQDVAKDSVKS 345

Query: 907  -ALQNWQNGVSFSKVLNSNGFAGVEHDSQLQEAGSSGEKPNRIDNGKLNNLHQDDNNRDM 1083
             A  N Q+  +  K  +++    V  D     A  S +          N + +DD+  D 
Sbjct: 346  DAASNEQDSNAVQKDDSTSDIDDVTSDDSQDVAKDSVKSDATSSEQDSNAVQKDDSTSDK 405

Query: 1084 EDILT------GKNSVQQAERPSKEVGN-LKMEVIADSTSGLXXXXXXRLGKDQDEKGPQ 1242
            +D+ +       K+SV+  +  +++  N ++ + IA     +       + KD D+    
Sbjct: 406  DDVTSDDSQDVAKDSVKSDDASNEQDSNAVQKDDIASDKDDVTSDDSQDVAKDSDKSDAT 465

Query: 1243 KDLSVTSHVEND 1278
                 ++ V+ D
Sbjct: 466  STKQDSNTVQQD 477


>ref|XP_001328312.1| hypothetical protein [Trichomonas vaginalis G3]
            gi|121911253|gb|EAY16089.1| hypothetical protein
            TVAG_278550 [Trichomonas vaginalis G3]
          Length = 2711

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 89/401 (22%), Positives = 161/401 (40%), Gaps = 17/401 (4%)
 Frame = +1

Query: 100  EGFKSENFELKVEKIDMEGLSETKDLEG-----DEVFEEASDVEVTSVEKINVGDSFVAD 264
            +    EN E   +K + +GL E KDLE      D + ++ + +  +S +K++      A 
Sbjct: 577  KNLNGENKEEDGDKNNFDGLDE-KDLENVAMNIDSIDDDEAGI-TSSRKKLHGEGKRSAT 634

Query: 265  TDRMSVENEVDKFEEAVEEHSYEMEEGVETADNGVEKEADRD-------ELTPSGTDRVV 423
            + R S+  + DK + A        E      DN  +K  ++D       +   S  D   
Sbjct: 635  SSRKSLHGD-DKNKSATSSKKNLNEINDANKDNDNDKLLEKDMAEKGDKDAFSSKKDLEN 693

Query: 424  DNGKDVVKEVPDLVTASVGVSEYGSGDSKDSTVVIEGSEIVFPSSNNQKEDQSVILESSD 603
             N KD      DL   S  +++  + DSK  +      ++   +  N+ E  + + + +D
Sbjct: 694  KNNKDATNSKKDLNNGS-NLNDKDNNDSKKDSKT-SSKDLGTENKENESEVSAALKDDAD 751

Query: 604  NGIIGKHEPQLYRDIKKVDVNEEGEGALSHISEKKNDISGKNDKDLTMSEIYETSTHRQY 783
            N +  K +  L  D  K   ++E E   S+   +  D + K+ KDL   E    +   + 
Sbjct: 752  NVVSSKKD--LNNDANKSKKDKENEAVKSNKDLQNKDDAVKSQKDLNNKENENDAVSSKK 809

Query: 784  DINEDLNNVPDGSKCDEKADMVEDLVDIVSDDGIDVKSSGVALQNWQNGVSFSKVLNSNG 963
            D+N D N      + +E  D  +   D+ + +   VKSS    ++ QN    ++ + S  
Sbjct: 810  DLNNDANKSKKDLQNNENNDANKSKKDLNATEKDAVKSS----KDLQNNEKENEAIKSQK 865

Query: 964  FAGVEHDSQLQEAGSSG-EKPNRIDNGKLNNLHQDDNNRDMEDILTGKN----SVQQAER 1128
                + D+   +    G EK N     K +    +D N+  +DI   K+    S +  + 
Sbjct: 866  DLQNKDDANKSKKDLQGDEKENEAVKSKKD--LDNDQNKTEKDIQNEKDLANKSNKDLQN 923

Query: 1129 PSKEVGNLKMEVIADSTSGLXXXXXXRLGKDQDEKGPQKDL 1251
              KE GN   + + D           +   ++D K  +KDL
Sbjct: 924  NEKEEGNKSKKDLQDIEKEDNANKSKKDLNNEDAKKSEKDL 964