BLASTX nr result

ID: Bupleurum21_contig00009424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009424
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF80349.1| exo-polygalacturonase [Daucus carota]                 120   9e-26
gb|AAB50843.1| iEP4 [Daucus carota] gi|4204870|gb|AAD11468.1| iE...   120   1e-25
gb|AAA98926.1| secreted glycoprotein, partial [Daucus carota]         118   6e-25
ref|XP_002314590.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002311760.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>dbj|BAF80349.1| exo-polygalacturonase [Daucus carota]
          Length = 391

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
 Frame = -1

Query: 427 GNINVVSFFTVLLIISPAAGYAERSSCDFPAIYNIGDGNSDAGGFTTVFGGTPRFY---- 260
           G  + +S F   ++++ +   A   +CDFPAI+N GD NSD G F   F G P F+    
Sbjct: 2   GKHSALSVFLFSILVAHSHVSASSQTCDFPAIFNFGDANSDTGAFAAWFFGNPPFFGQSY 61

Query: 259 ---APGRSSDGRLIIDFIASSLGKPFLSHYLDSVGANFSHGANFAQXXXXXXXXXXXXXX 89
              + GR SDGRL+IDF+A+ LG PFL  Y+DS+GANFSHGANFA               
Sbjct: 62  FNGSAGRVSDGRLLIDFMATDLGLPFLHPYMDSLGANFSHGANFANILSTIALPTSNIIP 121

Query: 88  XXXXPFGFNPIYVGLQFTQFVQFVQKSQ 5
               P G NP+ + +Q  QF QFV +SQ
Sbjct: 122 GVRPPRGLNPVNLDIQVAQFAQFVNRSQ 149


>gb|AAB50843.1| iEP4 [Daucus carota] gi|4204870|gb|AAD11468.1| iEP4 [Daucus carota]
          Length = 391

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
 Frame = -1

Query: 427 GNINVVSFFTVLLIISPAAGYAERSSCDFPAIYNIGDGNSDAGGFTTVFGGTPRFY---- 260
           G  +  S F   ++++ +   A   +CDFPAI+N GD NSD G F   F G P F+    
Sbjct: 2   GKHSAFSVFLFSILVAHSHVSASSQTCDFPAIFNFGDANSDTGAFAAWFFGNPPFFGQSY 61

Query: 259 ---APGRSSDGRLIIDFIASSLGKPFLSHYLDSVGANFSHGANFAQXXXXXXXXXXXXXX 89
              + GR SDGRL+IDF+A+ LG PFL  Y+DS+GANFSHGANFA               
Sbjct: 62  FNGSAGRVSDGRLLIDFMATDLGLPFLHPYMDSLGANFSHGANFANILSTIALPTSNIIP 121

Query: 88  XXXXPFGFNPIYVGLQFTQFVQFVQKSQ 5
               P G NP+ + +Q  QF QFV +SQ
Sbjct: 122 GVRPPRGLNPVNLDIQVAQFAQFVNRSQ 149


>gb|AAA98926.1| secreted glycoprotein, partial [Daucus carota]
          Length = 383

 Score =  118 bits (295), Expect = 6e-25
 Identities = 65/143 (45%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
 Frame = -1

Query: 412 VSFFTVLLIISPAAGYAERSSCDFPAIYNIGDGNSDAGGFTTVFGGTPRFY-------AP 254
           V  F++L+  S  +  A   +CDFPAI+N GD NSD G F   F G P F+       + 
Sbjct: 1   VFLFSILVAHSHVS--ASSQTCDFPAIFNFGDANSDTGAFAAWFFGNPPFFGQSYFNGSA 58

Query: 253 GRSSDGRLIIDFIASSLGKPFLSHYLDSVGANFSHGANFAQXXXXXXXXXXXXXXXXXXP 74
           GR SDGRL+IDF+A+ LG PFL  Y+DS+GANFSHGANFA                   P
Sbjct: 59  GRVSDGRLLIDFMATDLGLPFLHPYMDSLGANFSHGANFANILSTIALPTSNIIPGVRPP 118

Query: 73  FGFNPIYVGLQFTQFVQFVQKSQ 5
            G NP+ + +Q  QF QFV +SQ
Sbjct: 119 RGLNPVNLDIQVAQFAQFVNRSQ 141


>ref|XP_002314590.1| predicted protein [Populus trichocarpa] gi|222863630|gb|EEF00761.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  115 bits (289), Expect = 3e-24
 Identities = 68/147 (46%), Positives = 86/147 (58%), Gaps = 7/147 (4%)
 Frame = -1

Query: 424 NINVVSFFTVLLIISPAAGYAERSSCDFPAIYNIGDGNSDAGGFTTVFGGTPR------F 263
           +++VVS FT+LLI +        S C FPAI+N GD NSD GG + VFG  P       F
Sbjct: 6   SVSVVSIFTLLLISTVQWVAFATSPCHFPAIFNFGDSNSDTGGLSAVFGQAPPPHGESYF 65

Query: 262 YAP-GRSSDGRLIIDFIASSLGKPFLSHYLDSVGANFSHGANFAQXXXXXXXXXXXXXXX 86
           + P GR  DGRLIIDFIA S G P+LS YLDSVG+NF+HGANFA                
Sbjct: 66  HHPAGRYCDGRLIIDFIAKSFGLPYLSAYLDSVGSNFTHGANFATAGSTIRPQNSTLHQS 125

Query: 85  XXXPFGFNPIYVGLQFTQFVQFVQKSQ 5
                GF+PI + +Q+ +F  F ++SQ
Sbjct: 126 -----GFSPISLDVQWNEFYDFHRRSQ 147


>ref|XP_002311760.1| predicted protein [Populus trichocarpa] gi|222851580|gb|EEE89127.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  112 bits (280), Expect = 3e-23
 Identities = 64/127 (50%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
 Frame = -1

Query: 364 AERSSCDFPAIYNIGDGNSDAGGFTTVFGGTPR------FYAP-GRSSDGRLIIDFIASS 206
           A  SSCDFPAI+N GD NSD GG +  FG  P       F+ P GR SDGRLI+DFIA S
Sbjct: 12  ATASSCDFPAIFNFGDSNSDTGGLSAAFGQAPSPNGETYFHHPAGRYSDGRLILDFIAES 71

Query: 205 LGKPFLSHYLDSVGANFSHGANFAQXXXXXXXXXXXXXXXXXXPFGFNPIYVGLQFTQFV 26
           LG P LS YLDSVG+NFSHGANFA                     G++PI + +Q  Q+ 
Sbjct: 72  LGVPHLSAYLDSVGSNFSHGANFATAGSTIRPQNTTQSQS-----GYSPISLNVQSVQYS 126

Query: 25  QFVQKSQ 5
            F Q+SQ
Sbjct: 127 DFKQRSQ 133


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