BLASTX nr result
ID: Bupleurum21_contig00009242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009242
(1035 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana] gi|33... 238 1e-60
ref|XP_002888422.1| calcium-binding EF hand family protein [Arab... 236 5e-60
ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi... 236 5e-60
emb|CAH67493.1| H0306B06.8 [Oryza sativa Indica Group] gi|116310... 233 8e-59
ref|NP_001053202.1| Os04g0496800 [Oryza sativa Japonica Group] g... 233 8e-59
>ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana] gi|332196272|gb|AEE34393.1|
LETM1-like protein [Arabidopsis thaliana]
Length = 736
Score = 238 bits (608), Expect = 1e-60
Identities = 135/266 (50%), Positives = 182/266 (68%), Gaps = 10/266 (3%)
Frame = +3
Query: 267 RIMLLQKRIGLELLAKICSGTNLTRRERKLFIHITADVFMRVPGAISVGVPFVEFLLPAF 446
+++ RI + LL K+ +G L+RRER+ TAD+F VP A+ + VPF+EFLLP F
Sbjct: 199 KLLWADVRISVRLLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVF 258
Query: 447 LILYPKVLP---QNKLV---MVNRKLIARLEYAKFLEDTAIEIAKIVPNSQAGHFVPTYR 608
L L+P +LP Q+K+ + R+L AR+EYAKFL+DT E+AK V S++G T
Sbjct: 259 LKLFPNMLPSTFQDKMKEEEALKRRLNARMEYAKFLQDTVKEMAKEVQTSRSGEIKKTAE 318
Query: 609 DFASFVTMFLFRGPVRVKDVWCFAKFFNDDAIVDNLRRVHLVSMCEFVGITPCGTEDNLR 788
D F+T V ++ FAK FND+ +DN+ R LV+MC+++GI+P GT+ LR
Sbjct: 319 DLDGFMTKVRRGVGVSNDEILGFAKLFNDELTLDNINRSRLVNMCKYMGISPFGTDAYLR 378
Query: 789 FMLLKRLNWIKKNDKLIQAKCVESLSEADLHKVCRARG---IHAGEEMREQLCDWLDLSL 959
+ML KRL IKK+DKLI+A+ VESLSEA+L + CR RG + + EEMREQL DWLDLSL
Sbjct: 379 YMLRKRLQEIKKDDKLIKAEGVESLSEAELRQACRERGMLQLGSVEEMREQLVDWLDLSL 438
Query: 960 NHSVPSAVLILSRNFTRAGK-KPVEA 1034
NHSVPS++LILSR+F+ AGK KP EA
Sbjct: 439 NHSVPSSLLILSRSFSMAGKLKPEEA 464
>ref|XP_002888422.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
lyrata] gi|297334263|gb|EFH64681.1| calcium-binding EF
hand family protein [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 236 bits (603), Expect = 5e-60
Identities = 134/266 (50%), Positives = 181/266 (68%), Gaps = 10/266 (3%)
Frame = +3
Query: 267 RIMLLQKRIGLELLAKICSGTNLTRRERKLFIHITADVFMRVPGAISVGVPFVEFLLPAF 446
+++ RI + LL K+ +G L+RRER+ TAD+F VP A+ + VPF+EFLLP F
Sbjct: 210 KLLWADVRISVRLLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVF 269
Query: 447 LILYPKVLP---QNKLV---MVNRKLIARLEYAKFLEDTAIEIAKIVPNSQAGHFVPTYR 608
L L+P +LP Q+K+ + R+L AR+EYAKFL+DT E+AK V S++G T
Sbjct: 270 LKLFPNMLPSTFQDKMKEEEALKRRLNARMEYAKFLQDTVKEMAKEVQTSRSGEIKKTAE 329
Query: 609 DFASFVTMFLFRGPVRVKDVWCFAKFFNDDAIVDNLRRVHLVSMCEFVGITPCGTEDNLR 788
D F+ V ++ FAK FND+ +DN+ R LV+MC+++GI+P GT+ LR
Sbjct: 330 DLDGFMNKVRRGVGVSNDEILGFAKLFNDELTLDNINRSRLVNMCKYMGISPFGTDAYLR 389
Query: 789 FMLLKRLNWIKKNDKLIQAKCVESLSEADLHKVCRARG---IHAGEEMREQLCDWLDLSL 959
+ML KRL IKK+DKLI+A+ VESLSEA+L + CR RG + + EEMREQL DWLDLSL
Sbjct: 390 YMLRKRLQEIKKDDKLIKAEGVESLSEAELRQACRERGMLQLGSVEEMREQLIDWLDLSL 449
Query: 960 NHSVPSAVLILSRNFTRAGK-KPVEA 1034
NHSVPS++LILSR+F+ AGK KP EA
Sbjct: 450 NHSVPSSLLILSRSFSMAGKLKPEEA 475
>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
mitochondrial [Vitis vinifera]
gi|296084337|emb|CBI24725.3| unnamed protein product
[Vitis vinifera]
Length = 764
Score = 236 bits (603), Expect = 5e-60
Identities = 132/266 (49%), Positives = 179/266 (67%), Gaps = 10/266 (3%)
Frame = +3
Query: 267 RIMLLQKRIGLELLAKICSGTNLTRRERKLFIHITADVFMRVPGAISVGVPFVEFLLPAF 446
+++ RI LL K+ G L+RRER+ TAD+F VP A+ + VPF+EFLLP F
Sbjct: 231 KLLWADVRISSRLLLKLAGGKGLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVF 290
Query: 447 LILYPKVLP---QNKLV---MVNRKLIARLEYAKFLEDTAIEIAKIVPNSQAGHFVPTYR 608
L L+P +LP Q+K+ + R+L AR+EYA+FL+DT E+AK V NS++G T
Sbjct: 291 LKLFPNMLPSTFQDKMKEQEALKRRLNARIEYARFLQDTVKEMAKEVQNSRSGEIKKTAE 350
Query: 609 DFASFVTMFLFRGPVRVKDVWCFAKFFNDDAIVDNLRRVHLVSMCEFVGITPCGTEDNLR 788
D F+ V ++ FAK FND+ +DN+ R LV+MC+++GI+P GT+ LR
Sbjct: 351 DLDEFLNRVRRGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLR 410
Query: 789 FMLLKRLNWIKKNDKLIQAKCVESLSEADLHKVCRAR---GIHAGEEMREQLCDWLDLSL 959
+ML KRL WIK +D+LIQA+ VESLSEA+L + CR R G+ + EEMR+QL DWLDLSL
Sbjct: 411 YMLRKRLQWIKNDDRLIQAEGVESLSEAELREDCRERGMLGLRSVEEMRQQLRDWLDLSL 470
Query: 960 NHSVPSAVLILSRNFTRAGK-KPVEA 1034
NHSVPS++LILSR FT +GK +P EA
Sbjct: 471 NHSVPSSLLILSRAFTVSGKVRPEEA 496
>emb|CAH67493.1| H0306B06.8 [Oryza sativa Indica Group] gi|116310712|emb|CAH67509.1|
OSIGBa0092E01.4 [Oryza sativa Indica Group]
Length = 753
Score = 233 bits (593), Expect = 8e-59
Identities = 133/267 (49%), Positives = 177/267 (66%), Gaps = 11/267 (4%)
Frame = +3
Query: 267 RIMLLQKRIGLELLAKICSGTNLTRRERKLFIHITADVFMRVPGAISVGVPFVEFLLPAF 446
+++ RI LL K+ G +LTRRER+ TAD+F VP A+ + VPF+EFLLP F
Sbjct: 218 KLLWADVRISSRLLVKLAGGKSLTRRERQQLTRTTADLFRLVPFAVFIIVPFMEFLLPVF 277
Query: 447 LILYPKVLP---QNKLV---MVNRKLIARLEYAKFLEDTAIEIAKIVPNSQAGHFVPTYR 608
L ++P +LP Q+K+ + RKL AR+EYA+FL+DTA E+AK V S++G T
Sbjct: 278 LKMFPNMLPSTFQDKMKEEEALKRKLKARMEYARFLQDTAKEMAKEVQTSRSGEMKQTAE 337
Query: 609 DFASFVTMFLFRGPVRVKDVWCFAKFFNDDAIVDNLRRVHLVSMCEFVGITPCGTEDNLR 788
D F+ G V +++ FAK FND+ +DN+ R LV+MC+++GI P GT+ L
Sbjct: 338 DLDEFLNKVRKGGHVSNEEILSFAKLFNDELTLDNMNRARLVNMCKYMGIQPFGTDHYLT 397
Query: 789 FMLLKRLNWIKKNDKLIQAKCVESLSEADLHKVCRARGIHAG----EEMREQLCDWLDLS 956
FML K+L IK +DK+IQA+ VESLSE +L + CR RG H G EEM+ QL DWLDLS
Sbjct: 398 FMLRKKLQEIKNDDKMIQAEGVESLSEEELRQACRERG-HLGLLSTEEMQNQLRDWLDLS 456
Query: 957 LNHSVPSAVLILSRNFTRAGK-KPVEA 1034
LNHSVPS++LILSR FT +GK KP EA
Sbjct: 457 LNHSVPSSLLILSRAFTMSGKMKPEEA 483
>ref|NP_001053202.1| Os04g0496800 [Oryza sativa Japonica Group]
gi|38345383|emb|CAD41252.2| OSJNBa0067K08.12 [Oryza
sativa Japonica Group] gi|113564773|dbj|BAF15116.1|
Os04g0496800 [Oryza sativa Japonica Group]
gi|125590879|gb|EAZ31229.1| hypothetical protein
OsJ_15330 [Oryza sativa Japonica Group]
gi|215697094|dbj|BAG91088.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 753
Score = 233 bits (593), Expect = 8e-59
Identities = 133/267 (49%), Positives = 177/267 (66%), Gaps = 11/267 (4%)
Frame = +3
Query: 267 RIMLLQKRIGLELLAKICSGTNLTRRERKLFIHITADVFMRVPGAISVGVPFVEFLLPAF 446
+++ RI LL K+ G +LTRRER+ TAD+F VP A+ + VPF+EFLLP F
Sbjct: 218 KLLWADVRISSRLLVKLAGGKSLTRRERQQLTRTTADLFRLVPFAVFIIVPFMEFLLPVF 277
Query: 447 LILYPKVLP---QNKLV---MVNRKLIARLEYAKFLEDTAIEIAKIVPNSQAGHFVPTYR 608
L ++P +LP Q+K+ + RKL AR+EYA+FL+DTA E+AK V S++G T
Sbjct: 278 LKMFPNMLPSTFQDKMKEEEALKRKLKARMEYARFLQDTAKEMAKEVQTSRSGEMKQTAE 337
Query: 609 DFASFVTMFLFRGPVRVKDVWCFAKFFNDDAIVDNLRRVHLVSMCEFVGITPCGTEDNLR 788
D F+ G V +++ FAK FND+ +DN+ R LV+MC+++GI P GT+ L
Sbjct: 338 DLDEFLNKVRKGGHVSNEEILSFAKLFNDELTLDNMNRARLVNMCKYMGIQPFGTDHYLT 397
Query: 789 FMLLKRLNWIKKNDKLIQAKCVESLSEADLHKVCRARGIHAG----EEMREQLCDWLDLS 956
FML K+L IK +DK+IQA+ VESLSE +L + CR RG H G EEM+ QL DWLDLS
Sbjct: 398 FMLRKKLQEIKNDDKMIQAEGVESLSEEELRQACRERG-HLGLLSTEEMQNQLRDWLDLS 456
Query: 957 LNHSVPSAVLILSRNFTRAGK-KPVEA 1034
LNHSVPS++LILSR FT +GK KP EA
Sbjct: 457 LNHSVPSSLLILSRAFTMSGKMKPEEA 483