BLASTX nr result

ID: Bupleurum21_contig00009163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009163
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
emb|CBI31710.3| unnamed protein product [Vitis vinifera]              127   1e-27
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]   127   1e-27
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...   113   3e-23
ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [S...   110   1e-22

>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  127 bits (319), Expect = 1e-27
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = -1

Query: 593  MKPDAGVWGALLDACKMHANVDLAELALNNLVKLEPGNPAHYVVLSTIYAQSGRWGEARS 414
            ++PDAGVWGALL +C+MH+NV L E+AL++LVKLEP NPAH+VVLS+IYAQSGRW +A  
Sbjct: 798  VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857

Query: 413  TRVQMTDTGLRKIPGCSWLEVKN 345
             R +M D GL+K PGCSW+E+KN
Sbjct: 858  ARSKMNDLGLKKTPGCSWVELKN 880


>emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  127 bits (319), Expect = 1e-27
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = -1

Query: 593 MKPDAGVWGALLDACKMHANVDLAELALNNLVKLEPGNPAHYVVLSTIYAQSGRWGEARS 414
           ++PDAGVWGALL +C+MH+NV L E+AL++LVKLEP NPAH+VVLS+IYAQSGRW +A  
Sbjct: 442 VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 501

Query: 413 TRVQMTDTGLRKIPGCSWLEVKN 345
            R +M D GL+K PGCSW+E+KN
Sbjct: 502 ARSKMNDLGLKKTPGCSWVELKN 524


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  127 bits (319), Expect = 1e-27
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = -1

Query: 593  MKPDAGVWGALLDACKMHANVDLAELALNNLVKLEPGNPAHYVVLSTIYAQSGRWGEARS 414
            ++PDAGVWGALL +C+MH+NV L E+AL++LVKLEP NPAH+VVLS+IYAQSGRW +A  
Sbjct: 798  VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857

Query: 413  TRVQMTDTGLRKIPGCSWLEVKN 345
             R +M D GL+K PGCSW+E+KN
Sbjct: 858  ARSKMNDLGLKKTPGCSWVELKN 880


>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Glycine max]
          Length = 887

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/89 (60%), Positives = 65/89 (73%)
 Frame = -1

Query: 590  KPDAGVWGALLDACKMHANVDLAELALNNLVKLEPGNPAHYVVLSTIYAQSGRWGEARST 411
            +PDA VWGALL ACKMH+NV L E+AL++L+KLEP N  HY+VLS IYAQ GRW +AR T
Sbjct: 798  EPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRT 857

Query: 410  RVQMTDTGLRKIPGCSWLEVKNARLPMHG 324
            R  MTD GL+K PG SW+      L + G
Sbjct: 858  RSNMTDHGLKKNPGYSWVGAHKQGLSLSG 886


>ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
           gi|241922031|gb|EER95175.1| hypothetical protein
           SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -1

Query: 593 MKPDAGVWGALLDACKMHANVDLAELALNNLVKLEPGNPAHYVVLSTIYAQSGRWGEARS 414
           +KPD+G+WGALL+ CK+H NV+LAELAL+ L++LEP +  +YV+LS IYAQSG+W EA  
Sbjct: 433 VKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAAR 492

Query: 413 TRVQMTDTGLRKIPGCSWLEVK 348
            R  MT+ GL+KI  CSW+E+K
Sbjct: 493 VRKLMTNRGLKKIIACSWIELK 514


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