BLASTX nr result

ID: Bupleurum21_contig00009082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009082
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis...   110   1e-22
ref|XP_002311543.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002527542.1| zinc finger protein, putative [Ricinus commu...   102   2e-20
ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002305892.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis vinifera]
          Length = 246

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = -1

Query: 309 SLPLHGSAFRSLGIEAHASVHHGVVPPARPPFHVANGGAKFDQGFYGLPMFVEEDEAEMF 130
           SLPLHGSAFRSLGIEAH+S+H  +VP  RP      GGA+F+QG+YGLP+F+E++EAE+F
Sbjct: 142 SLPLHGSAFRSLGIEAHSSLHQRMVPLERPD---TRGGARFEQGYYGLPVFIEDEEAELF 198

Query: 129 WPGSFRQVEHRSNAIVSSSGFEL--GQNSNFTVMTPQP 22
           WPGSFRQ+  R   +  S+  EL  G N NF  M P P
Sbjct: 199 WPGSFRQIGER---VGGSAIPELAQGPNINFVPMAPPP 233


>ref|XP_002311543.1| predicted protein [Populus trichocarpa] gi|222851363|gb|EEE88910.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
 Frame = -1

Query: 309 SLPLHGSAFRSLGIEAHASVHHGVVPPARPPFHVANGGAKFDQGFYGLPMFVEEDEAEMF 130
           SLPL+GSAFRSLGI+AHA++H  ++    PP  V  GGA+F+QG+YG+PMF+E+D+   +
Sbjct: 142 SLPLNGSAFRSLGIKAHAAMHQSIIQSQTPP--VTRGGARFEQGYYGMPMFMEDDDVGPY 199

Query: 129 WPGSFRQVEHRSNAIVSSSGFELGQ--NSNFTVMTPQPPRS 13
           WPGSFR+V     A+  +SG EL Q  N NF    P PPR+
Sbjct: 200 WPGSFRRV---GEAVGGNSGLELAQSPNMNFEARAP-PPRT 236


>ref|XP_002527542.1| zinc finger protein, putative [Ricinus communis]
           gi|223533092|gb|EEF34851.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 249

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/95 (48%), Positives = 66/95 (69%)
 Frame = -1

Query: 309 SLPLHGSAFRSLGIEAHASVHHGVVPPARPPFHVANGGAKFDQGFYGLPMFVEEDEAEMF 130
           SLPLHGSA+R+LGI+AH+++H  ++P  +PP H   GGAKF+QG+YG+P+F+E+D+  + 
Sbjct: 143 SLPLHGSAYRNLGIKAHSAMHQNIIPSQKPPDHT-RGGAKFEQGYYGMPVFMEDDDVGLH 201

Query: 129 WPGSFRQVEHRSNAIVSSSGFELGQNSNFTVMTPQ 25
           WPGSFRQV       +    +    N+N   MTPQ
Sbjct: 202 WPGSFRQVAGSVGGNIDLQ-YAQSPNTNIVEMTPQ 235


>ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|222864884|gb|EEF02015.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/97 (49%), Positives = 63/97 (64%)
 Frame = -1

Query: 309 SLPLHGSAFRSLGIEAHASVHHGVVPPARPPFHVANGGAKFDQGFYGLPMFVEEDEAEMF 130
           SLPLHGSAFRSLGI+AHA++H  ++    P      GGA+F QG+YG+PMF+EED+   +
Sbjct: 142 SLPLHGSAFRSLGIKAHAAMHQSLIQSQTPAN--TRGGARFGQGYYGMPMFMEEDDVGSY 199

Query: 129 WPGSFRQVEHRSNAIVSSSGFELGQNSNFTVMTPQPP 19
           WPGSFRQV+     +  +SG E  Q+ N       PP
Sbjct: 200 WPGSFRQVD---EDVGGNSGLEFAQSPNMNFEARAPP 233


>ref|XP_002305892.1| predicted protein [Populus trichocarpa] gi|222848856|gb|EEE86403.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/103 (49%), Positives = 66/103 (64%)
 Frame = -1

Query: 309 SLPLHGSAFRSLGIEAHASVHHGVVPPARPPFHVANGGAKFDQGFYGLPMFVEEDEAEMF 130
           SLPLHGS+FRSLGIEAH+SVH    PP R      +  A+FDQG+ GLP+F+E+DEAE+ 
Sbjct: 153 SLPLHGSSFRSLGIEAHSSVHQNFAPPVRSL--EISSSARFDQGYAGLPVFMEDDEAELL 210

Query: 129 WPGSFRQVEHRSNAIVSSSGFELGQNSNFTVMTPQPPRSQPES 1
           WPGSFRQV    +A      F +  +SN   +   PP +  +S
Sbjct: 211 WPGSFRQVAVADDA---HQSFVVAGSSNMIFLGATPPVNLDDS 250


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