BLASTX nr result

ID: Bupleurum21_contig00008998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008998
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   396   e-108
sp|P42055.2|VDAC1_SOLTU RecName: Full=Mitochondrial outer membra...   396   e-108
gb|AAB38498.1| porin [Mesembryanthemum crystallinum]                  395   e-108
dbj|BAF95072.1| voltage-dependent anion channel [Nicotiana tabacum]   391   e-107
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   391   e-106

>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/258 (75%), Positives = 224/258 (86%)
 Frame = -3

Query: 776 KKARDLLYKDYQSDQKFSITTYSNTGAVIASSATKKGELIFADVNTQLKQGKVTADIKVD 597
           K+ARDLLYKDYQSD KF+ITTYS TG  I SS TKKG+L  ADVNTQLK   +T DIKVD
Sbjct: 13  KRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNITTDIKVD 72

Query: 596 TDSNLVGIIAVDEAAPGLKTILSVKVPDQRSTKLELQYLHDFAGINTSIGLTANPTVNFA 417
           T SNLV  I VDE APGLK I S KVPDQRS K+ELQYLHD+AGI+TSIGLTANP VNF+
Sbjct: 73  TSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIGLTANPIVNFS 132

Query: 416 GVIGTSVASLGTDVSFDTKTGNFTKYNAGLSFCNADLIASLAVNDQGNLLNASYYHVLSP 237
           GV+G+++ +LGTD+SFDTKTGNFTK N GLSF NADLIASL +ND+G+ L+ASYYH ++P
Sbjct: 133 GVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGDTLSASYYHTVNP 192

Query: 236 LTNSAVGAELTHSFSTNENTITVGTQHALDPLTTVKARVNNSGKVHALIQHEWRPKSLFT 57
           LT++AVGAE+ HSFS+NENTITVGTQHALDPLT+VKARVNN GK  ALIQHEWRPKS FT
Sbjct: 193 LTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFT 252

Query: 56  ISGEVDTKAVDKTAKLGL 3
           +SGEVDTKA++K+AK+GL
Sbjct: 253 VSGEVDTKAIEKSAKVGL 270


>sp|P42055.2|VDAC1_SOLTU RecName: Full=Mitochondrial outer membrane protein porin of 34 kDa;
           AltName: Full=POM 34; AltName: Full=Voltage-dependent
           anion-selective channel protein; Short=VDAC
           gi|516166|emb|CAA56599.1| 34 kDA porin [Solanum
           tuberosum]
          Length = 276

 Score =  396 bits (1017), Expect = e-108
 Identities = 197/258 (76%), Positives = 224/258 (86%)
 Frame = -3

Query: 776 KKARDLLYKDYQSDQKFSITTYSNTGAVIASSATKKGELIFADVNTQLKQGKVTADIKVD 597
           KKARDLLYKDYQSD KFSITTYS TG VI SS +KKG+L  ADVNTQLK   VT DIKVD
Sbjct: 13  KKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVD 72

Query: 596 TDSNLVGIIAVDEAAPGLKTILSVKVPDQRSTKLELQYLHDFAGINTSIGLTANPTVNFA 417
           T+SNL   I VDEAAPGLKTILS +VPDQRS KLE+QYLHD+AGI TS+GLTANP VNF+
Sbjct: 73  TNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFS 132

Query: 416 GVIGTSVASLGTDVSFDTKTGNFTKYNAGLSFCNADLIASLAVNDQGNLLNASYYHVLSP 237
           GV+GT++ +LGTDVSFDTKTG+FTK NAGLSF NADL+ASL +N++G+ L ASYYH +SP
Sbjct: 133 GVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSP 192

Query: 236 LTNSAVGAELTHSFSTNENTITVGTQHALDPLTTVKARVNNSGKVHALIQHEWRPKSLFT 57
           LT++AVGAE+ HSFSTNEN ITVGTQH LDPLT+VKAR+NN GK  AL+QHEWRPKSLFT
Sbjct: 193 LTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFT 252

Query: 56  ISGEVDTKAVDKTAKLGL 3
           +SGEVDTK+VDK AK GL
Sbjct: 253 VSGEVDTKSVDKGAKFGL 270


>gb|AAB38498.1| porin [Mesembryanthemum crystallinum]
          Length = 276

 Score =  395 bits (1014), Expect = e-108
 Identities = 195/258 (75%), Positives = 223/258 (86%)
 Frame = -3

Query: 776 KKARDLLYKDYQSDQKFSITTYSNTGAVIASSATKKGELIFADVNTQLKQGKVTADIKVD 597
           KKARDLLY+DYQ+DQKFSITTYS TG  I SS TKKG+L  ADVNTQLK   VT DIKVD
Sbjct: 13  KKARDLLYRDYQTDQKFSITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNVTTDIKVD 72

Query: 596 TDSNLVGIIAVDEAAPGLKTILSVKVPDQRSTKLELQYLHDFAGINTSIGLTANPTVNFA 417
           T+SNL+  I VDEAAPGLKTILS +VPDQRS KLELQYLHD+AGI TS+GLTANP VNF+
Sbjct: 73  TNSNLLTTITVDEAAPGLKTILSFRVPDQRSGKLELQYLHDYAGICTSVGLTANPIVNFS 132

Query: 416 GVIGTSVASLGTDVSFDTKTGNFTKYNAGLSFCNADLIASLAVNDQGNLLNASYYHVLSP 237
           GV+GT++ + GTDVSFD+KTGNFTK NAGLSF NADLIASL +ND+G+ LNASYYH +SP
Sbjct: 133 GVLGTNLLAFGTDVSFDSKTGNFTKCNAGLSFANADLIASLTLNDKGDTLNASYYHTISP 192

Query: 236 LTNSAVGAELTHSFSTNENTITVGTQHALDPLTTVKARVNNSGKVHALIQHEWRPKSLFT 57
           LT+SAVGAE+ HSFSTN+NTIT+G QHA+DPLT +K RVNN GK  ALIQHEWRPKSL T
Sbjct: 193 LTSSAVGAEVAHSFSTNQNTITLGAQHAIDPLTNLKGRVNNFGKATALIQHEWRPKSLVT 252

Query: 56  ISGEVDTKAVDKTAKLGL 3
            S EVDTKA++K+AK+GL
Sbjct: 253 FSAEVDTKAIEKSAKVGL 270


>dbj|BAF95072.1| voltage-dependent anion channel [Nicotiana tabacum]
          Length = 276

 Score =  391 bits (1005), Expect = e-107
 Identities = 193/258 (74%), Positives = 223/258 (86%)
 Frame = -3

Query: 776 KKARDLLYKDYQSDQKFSITTYSNTGAVIASSATKKGELIFADVNTQLKQGKVTADIKVD 597
           KK RDLLYKDYQSD KF+ITTYS TG  I SS TKKG+L  ADVNTQLK   +T DIKVD
Sbjct: 13  KKTRDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNITTDIKVD 72

Query: 596 TDSNLVGIIAVDEAAPGLKTILSVKVPDQRSTKLELQYLHDFAGINTSIGLTANPTVNFA 417
           T+SNL   I VD+AAPGLKTILS +VPDQRS KLE+QYLH++AGI+TS+GLTANP VNF+
Sbjct: 73  TNSNLFTTITVDDAAPGLKTILSFRVPDQRSGKLEVQYLHEYAGISTSVGLTANPIVNFS 132

Query: 416 GVIGTSVASLGTDVSFDTKTGNFTKYNAGLSFCNADLIASLAVNDQGNLLNASYYHVLSP 237
           GV+GT++ +LGTDVSFD+KTG+FTK NAGLSF NADL+ASL +ND+G+ L+ASYYH +SP
Sbjct: 133 GVVGTNILALGTDVSFDSKTGDFTKCNAGLSFTNADLVASLNLNDKGDNLSASYYHSVSP 192

Query: 236 LTNSAVGAELTHSFSTNENTITVGTQHALDPLTTVKARVNNSGKVHALIQHEWRPKSLFT 57
            T++AVGAE+ H FSTNENTITVGTQH LDPLT+VKARVNN GK  AL+QHEWRPKSLFT
Sbjct: 193 FTSTAVGAEVNHCFSTNENTITVGTQHRLDPLTSVKARVNNFGKASALLQHEWRPKSLFT 252

Query: 56  ISGEVDTKAVDKTAKLGL 3
           ISGEVDTK+VDK AK GL
Sbjct: 253 ISGEVDTKSVDKGAKFGL 270


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118484777|gb|ABK94257.1| unknown
           [Populus trichocarpa] gi|222852528|gb|EEE90075.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  391 bits (1004), Expect = e-106
 Identities = 190/258 (73%), Positives = 224/258 (86%)
 Frame = -3

Query: 776 KKARDLLYKDYQSDQKFSITTYSNTGAVIASSATKKGELIFADVNTQLKQGKVTADIKVD 597
           KKARDLLYKDYQSD KF++TTY++TG  + S+  KKGEL  ADV+ QLK   +T DIKVD
Sbjct: 13  KKARDLLYKDYQSDHKFTVTTYTSTGVALTSTGIKKGELFLADVSGQLKNKNITTDIKVD 72

Query: 596 TDSNLVGIIAVDEAAPGLKTILSVKVPDQRSTKLELQYLHDFAGINTSIGLTANPTVNFA 417
           T+SNL+  I +DE APGLKTI S KVPDQRS K+ELQY H++AGI+TS+GLTANP VNF+
Sbjct: 73  TNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLGLTANPIVNFS 132

Query: 416 GVIGTSVASLGTDVSFDTKTGNFTKYNAGLSFCNADLIASLAVNDQGNLLNASYYHVLSP 237
           GVIG++V SLGTD+SFDT TGNFTKYNAGLS+ NADLIASL VND+G+ L ASYYH + P
Sbjct: 133 GVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKGDTLTASYYHTVRP 192

Query: 236 LTNSAVGAELTHSFSTNENTITVGTQHALDPLTTVKARVNNSGKVHALIQHEWRPKSLFT 57
           LT++AVGAELT SFS+NENT+T+GTQHALDPLTTVKAR+NN GK  ALIQHEWRPKSLFT
Sbjct: 193 LTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASALIQHEWRPKSLFT 252

Query: 56  ISGEVDTKAVDKTAKLGL 3
           ISGEVDTKA++K+AK+GL
Sbjct: 253 ISGEVDTKAIEKSAKIGL 270


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