BLASTX nr result

ID: Bupleurum21_contig00008963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008963
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519068.1| PREDICTED: GTP-binding protein TypA/BipA hom...   496   e-138
ref|XP_003535904.1| PREDICTED: GTP-binding protein TypA/BipA hom...   491   e-137
ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA hom...   491   e-137
gb|AAR17698.1| GTP-binding protein TypA [Trifolium pratense]          489   e-136
ref|XP_002871578.1| elongation factor family protein [Arabidopsi...   489   e-136

>ref|XP_003519068.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 676

 Score =  496 bits (1276), Expect = e-138
 Identities = 244/277 (88%), Positives = 262/277 (94%)
 Frame = -1

Query: 942  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREKYEFM 763
            EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTF+VSGRGTLHITILIENMRRE YEFM
Sbjct: 400  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFM 459

Query: 762  VGPPKVINKKVNDKLLEPFEIATVEVPEVHMGAVVELLGKRRGQMIDMQGLGNEGTTLLK 583
            VGPPKVINKKVN++LLEP+EIATVEVPE HMGAVVELLGKRRGQM DMQG+G+EGTTLLK
Sbjct: 460  VGPPKVINKKVNEQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLK 519

Query: 582  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTVTSYAL 403
            YKIPTRGLLGLRN+ILTASRGTAILNT+FDSYGPWAGDISTRDQGSLVAFEDGT TSYA+
Sbjct: 520  YKIPTRGLLGLRNSILTASRGTAILNTVFDSYGPWAGDISTRDQGSLVAFEDGTSTSYAI 579

Query: 402  FGAQERGQMFVGPGAEVYKGMIVGIHQRPGDLALNICKKKAATNVRSNKEVTVVLDTHLE 223
              +QERGQMF+GPG +VYKG IVGIHQRPGDL+LN+CKKKAATNVRSNKE TV+LDT L+
Sbjct: 580  SSSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVILDTPLD 639

Query: 222  YSLDDCIEYIQEDELVEVTPQSIRMLKNPKMGKKSSR 112
            YSLDDCIEYIQEDELVEVTP SIRM KNPK+  K +R
Sbjct: 640  YSLDDCIEYIQEDELVEVTPASIRMCKNPKITNKKTR 676


>ref|XP_003535904.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 680

 Score =  491 bits (1265), Expect = e-137
 Identities = 242/277 (87%), Positives = 261/277 (94%)
 Frame = -1

Query: 942  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREKYEFM 763
            EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTF+VSGRGTLHITILIENMRRE YEFM
Sbjct: 404  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFM 463

Query: 762  VGPPKVINKKVNDKLLEPFEIATVEVPEVHMGAVVELLGKRRGQMIDMQGLGNEGTTLLK 583
            VGPPKVINKKV++KLLEP+EIATVEVPE HMGAVVELLGKRRGQM DMQG+G EGTTLLK
Sbjct: 464  VGPPKVINKKVDEKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGLEGTTLLK 523

Query: 582  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTVTSYAL 403
            YKIPTRGLLGLRN+ILTASRGTAILNT+FDSYGPWAG+ISTRDQGSLVAFEDGT TSYA+
Sbjct: 524  YKIPTRGLLGLRNSILTASRGTAILNTVFDSYGPWAGEISTRDQGSLVAFEDGTSTSYAI 583

Query: 402  FGAQERGQMFVGPGAEVYKGMIVGIHQRPGDLALNICKKKAATNVRSNKEVTVVLDTHLE 223
              +QERGQMF+GPG +VYKG IVGIHQRPGDL+LN+CKKKAATN+RSNKE TV+LDT L+
Sbjct: 584  SSSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLD 643

Query: 222  YSLDDCIEYIQEDELVEVTPQSIRMLKNPKMGKKSSR 112
            YSLDDCIEYIQEDELVEVTP SIRM KNPK+  K +R
Sbjct: 644  YSLDDCIEYIQEDELVEVTPASIRMSKNPKITNKKTR 680


>ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
            vinifera] gi|297739681|emb|CBI29863.3| unnamed protein
            product [Vitis vinifera]
          Length = 675

 Score =  491 bits (1265), Expect = e-137
 Identities = 243/275 (88%), Positives = 261/275 (94%)
 Frame = -1

Query: 942  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREKYEFM 763
            EGKYVTSRNLRDRLYRE+ERNLAM+VEDGETADTFIVSGRGTLHITILIENMRRE YEFM
Sbjct: 400  EGKYVTSRNLRDRLYREIERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFM 459

Query: 762  VGPPKVINKKVNDKLLEPFEIATVEVPEVHMGAVVELLGKRRGQMIDMQGLGNEGTTLLK 583
            VGPPKVINK+V+DKL EPFEIATVEVPE HMG+VVELLGKRRGQM DMQG+G+EGTTLLK
Sbjct: 460  VGPPKVINKRVDDKLQEPFEIATVEVPEEHMGSVVELLGKRRGQMFDMQGVGSEGTTLLK 519

Query: 582  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTVTSYAL 403
            YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDI+TRDQGSLVAFE+G+ TSYAL
Sbjct: 520  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDITTRDQGSLVAFEEGSTTSYAL 579

Query: 402  FGAQERGQMFVGPGAEVYKGMIVGIHQRPGDLALNICKKKAATNVRSNKEVTVVLDTHLE 223
              +QERGQMFVGPG +VYKG IVGIHQRPGDL+LN+CKKKAATNVRSNKE TVVLDT L+
Sbjct: 580  CSSQERGQMFVGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLD 639

Query: 222  YSLDDCIEYIQEDELVEVTPQSIRMLKNPKMGKKS 118
            YSLDDCIEYIQEDE+VEVTP SIRM KNPK+ KK+
Sbjct: 640  YSLDDCIEYIQEDEMVEVTPLSIRMCKNPKLAKKT 674


>gb|AAR17698.1| GTP-binding protein TypA [Trifolium pratense]
          Length = 676

 Score =  489 bits (1260), Expect = e-136
 Identities = 240/274 (87%), Positives = 258/274 (94%)
 Frame = -1

Query: 942  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREKYEFM 763
            EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRRE YEFM
Sbjct: 401  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFM 460

Query: 762  VGPPKVINKKVNDKLLEPFEIATVEVPEVHMGAVVELLGKRRGQMIDMQGLGNEGTTLLK 583
            VGPPKVINKKVNDK+LEP+EIATVEVPE HMGAVVELLGKRRGQM DMQG+G+EGTTL+K
Sbjct: 461  VGPPKVINKKVNDKVLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLVK 520

Query: 582  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTVTSYAL 403
            YKIPTRGLLGLRNAILTASRGTAILNT+FD YGPWAGD+STRD GSLVAFE GT TSYA+
Sbjct: 521  YKIPTRGLLGLRNAILTASRGTAILNTVFDCYGPWAGDMSTRDLGSLVAFEGGTSTSYAI 580

Query: 402  FGAQERGQMFVGPGAEVYKGMIVGIHQRPGDLALNICKKKAATNVRSNKEVTVVLDTHLE 223
              +QERGQMF+ PG EVYKG I+GIHQRPGDLALN+CKKKAATN+RSNKE +V+LDT L+
Sbjct: 581  ASSQERGQMFIAPGTEVYKGQIIGIHQRPGDLALNVCKKKAATNIRSNKEQSVILDTPLD 640

Query: 222  YSLDDCIEYIQEDELVEVTPQSIRMLKNPKMGKK 121
            YSLDDCIEYIQEDELVE+TPQSIRM KNPK+ KK
Sbjct: 641  YSLDDCIEYIQEDELVEITPQSIRMSKNPKLAKK 674


>ref|XP_002871578.1| elongation factor family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317415|gb|EFH47837.1| elongation factor family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  489 bits (1259), Expect = e-136
 Identities = 244/274 (89%), Positives = 255/274 (93%)
 Frame = -1

Query: 942  EGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREKYEFM 763
            EGKYVTSRNLRDRL RELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRRE YEFM
Sbjct: 399  EGKYVTSRNLRDRLNRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFM 458

Query: 762  VGPPKVINKKVNDKLLEPFEIATVEVPEVHMGAVVELLGKRRGQMIDMQGLGNEGTTLLK 583
            VGPPKVINK+VNDKLLEP+EIATVEVPE HMG VVELLGKRRGQM DMQG+G+EGTT L+
Sbjct: 459  VGPPKVINKRVNDKLLEPYEIATVEVPEAHMGPVVELLGKRRGQMFDMQGVGSEGTTFLR 518

Query: 582  YKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTVTSYAL 403
            YKIPTRGLLGLRNAILTASRGTAILNT+FDSYGPWAGDISTRD GSLVAFEDGT TSYAL
Sbjct: 519  YKIPTRGLLGLRNAILTASRGTAILNTVFDSYGPWAGDISTRDLGSLVAFEDGTSTSYAL 578

Query: 402  FGAQERGQMFVGPGAEVYKGMIVGIHQRPGDLALNICKKKAATNVRSNKEVTVVLDTHLE 223
              AQERGQMFVG G +VYKG IVGIHQRPGDL LNICKKKAATN+RSNK+VTV+LDT L 
Sbjct: 579  ASAQERGQMFVGSGVDVYKGQIVGIHQRPGDLGLNICKKKAATNIRSNKDVTVILDTPLT 638

Query: 222  YSLDDCIEYIQEDELVEVTPQSIRMLKNPKMGKK 121
            YSLDDCIEYI+EDELVEVTP SIRM KNPKM KK
Sbjct: 639  YSLDDCIEYIEEDELVEVTPSSIRMCKNPKMAKK 672


Top