BLASTX nr result
ID: Bupleurum21_contig00008957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00008957
(1872 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267... 248 3e-63
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2... 214 5e-53
ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|2... 211 4e-52
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu... 205 3e-50
ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797... 189 2e-45
>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
gi|147841364|emb|CAN71240.1| hypothetical protein
VITISV_034160 [Vitis vinifera]
gi|296085846|emb|CBI31170.3| unnamed protein product
[Vitis vinifera]
Length = 570
Score = 248 bits (634), Expect = 3e-63
Identities = 140/258 (54%), Positives = 175/258 (67%), Gaps = 8/258 (3%)
Frame = -2
Query: 752 GPTTSVSRNLSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETPPNLRTTLPDRPLSA 573
GP+ S +R +SNG L+TPPNLRTTLPDRPLSA
Sbjct: 280 GPSPSTARAMSNGRNPAPASRPSSPSPRVRNPPQPIVLPDFPLDTPPNLRTTLPDRPLSA 339
Query: 572 GRSRPGSTLTVKGNVETQSPAAIRRQSSPIVTRGRLTEPNGRGRVHANGQVTDTTDSHKA 393
GRSRPG+ +T+KGN ET + RRQSSPIVTRGR++EPN RGR+H+NG V D+ +S KA
Sbjct: 340 GRSRPGAAMTMKGNSETPT----RRQSSPIVTRGRVSEPNARGRLHSNGHVADSPESRKA 395
Query: 392 SHVLEASTRKPVKASP---DSTGFGRTISKKSLDMAIRHMDVKNGTNGTRPVMNSSLFPQ 222
SHV E S RKPVK S +STGFGRTISKKSLDMAIRHMD++NGT RP+ ++LFPQ
Sbjct: 396 SHVTEPS-RKPVKTSTTSSESTGFGRTISKKSLDMAIRHMDIRNGTGSIRPLSGTTLFPQ 454
Query: 221 SIRSANSRSQPGR---STSGPASL--DGNMPINDNRIISENGNYLNRYPENVNLENKYPI 57
SIRSA S++Q R ++S PAS+ +G++P ++N + SENGNY R EN E+
Sbjct: 455 SIRSAASKTQSARASSASSAPASVNSNGSLPASNNGVPSENGNYFTRPSENGAEEDDGRF 514
Query: 56 SSRLTAVDMYESSRYDAI 3
S++L D+YESSRYDAI
Sbjct: 515 SAKLNQTDIYESSRYDAI 532
Score = 171 bits (434), Expect = 5e-40
Identities = 92/128 (71%), Positives = 113/128 (88%), Gaps = 3/128 (2%)
Frame = -2
Query: 1403 VKLGRLSLGSAKQQPKSGFDDLLSSVDGGKNDYDWLLTPPGTPLFPSSDGSETQPALLAP 1224
+KLGRLS+GSAK +SG DDLLSSV+GGK+DYDWLLTPPGTPLFPSSDG+E+QP +LAP
Sbjct: 60 LKLGRLSVGSAKLA-RSGMDDLLSSVEGGKHDYDWLLTPPGTPLFPSSDGNESQPTMLAP 118
Query: 1223 RKS--SRSVSTTKASRLSVSESENIHPARPARSSSVTRPAVSSTKYSTYSKN-GTSILNT 1053
R S +RS STTKASRLSV++SE+ + +RP RSSSVTRP++S+++YSTYS + +SILNT
Sbjct: 119 RNSNLARSASTTKASRLSVAQSESSY-SRPTRSSSVTRPSISTSQYSTYSSSRSSSILNT 177
Query: 1052 SSASVSSY 1029
SSASVSSY
Sbjct: 178 SSASVSSY 185
>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
predicted protein [Populus trichocarpa]
Length = 596
Score = 214 bits (546), Expect = 5e-53
Identities = 124/216 (57%), Positives = 153/216 (70%), Gaps = 9/216 (4%)
Frame = -2
Query: 623 ETPPNLRTTLPDRPLSAGRSRPGSTLTVKGNVETQ-SPAAIRRQSSPIVTRGRLTEPNGR 447
+TPPNLRTTLPDRPLSAGRSRP T+KGN ET S A RR SSPIV+RGRLTEP+G+
Sbjct: 347 DTPPNLRTTLPDRPLSAGRSRPNVHATMKGNPETVGSVIAPRRHSSPIVSRGRLTEPSGK 406
Query: 446 GRVHANGQVTDTTDSHKASHVLEASTRKPVKASP---DSTGFGRTISKKSLDMAIRHMDV 276
GRVH+NG + D + K SHV E RKPVK+S +STGFGRTISKKSLDMAIRHMD+
Sbjct: 407 GRVHSNGHIADAPEPRKVSHVSELGMRKPVKSSSTASESTGFGRTISKKSLDMAIRHMDL 466
Query: 275 KNGTNGTRPVMNSSLFPQSIRSANSRSQPGRSTSGPASL-DGNMPINDNRIISENGNYLN 99
+NGT TR + +++LFPQSIRSA ++ RS S P S+ +GN+ D + EN +Y +
Sbjct: 467 RNGTGSTRSLSSTTLFPQSIRSATPKTHSARSRSAPESINNGNLQNGD---VLENESYFS 523
Query: 98 RYPE---NVNLENKYPISSRLT-AVDMYESSRYDAI 3
R E N +Y S++L+ VD+ ESSRYDAI
Sbjct: 524 RATEIRREANDGQRY--SAKLSEVVDICESSRYDAI 557
Score = 174 bits (441), Expect = 7e-41
Identities = 98/131 (74%), Positives = 114/131 (87%), Gaps = 4/131 (3%)
Frame = -2
Query: 1409 LSVKLGRLSLGSAKQQPKSGFDDLLSSVDGGKNDYDWLLTPPGTPLFPSSDGSETQPALL 1230
+SVKLGRLS+GSAK +SG DDLLSS +GGK+DYDWLLTPPGTPLFPSS+GSE+QP L+
Sbjct: 82 VSVKLGRLSVGSAKLV-RSGIDDLLSS-EGGKHDYDWLLTPPGTPLFPSSEGSESQPTLV 139
Query: 1229 APRKSS--RSVSTTK-ASRLSVSESENIHPARPARSSSVTRPAVSSTKYSTYSKN-GTSI 1062
APR SS RS STTK AS LSVS+SE+ H +RPARSSSVTRP++SS++YSTYS N +SI
Sbjct: 140 APRSSSLARSASTTKAASTLSVSQSESYHSSRPARSSSVTRPSISSSQYSTYSSNRSSSI 199
Query: 1061 LNTSSASVSSY 1029
LNTSSASVSSY
Sbjct: 200 LNTSSASVSSY 210
>ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|222855171|gb|EEE92718.1|
predicted protein [Populus trichocarpa]
Length = 562
Score = 211 bits (538), Expect = 4e-52
Identities = 128/254 (50%), Positives = 158/254 (62%), Gaps = 5/254 (1%)
Frame = -2
Query: 749 PTTSVSRNLSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETPPNLRTTLPDRPLSAG 570
P+TS R LSNG L+TPPNLRTTL RPLSAG
Sbjct: 274 PSTSAGRVLSNGRIPGPASRPSSPSPRVRPPQQPVIPPDFPLDTPPNLRTTLQGRPLSAG 333
Query: 569 RSRPGSTLTVKGNVETQ-SPAAIRRQSSPIVTRGRLTEPNGRGRVHANGQVTDTTDSHKA 393
RSR G + +KGN ET S A RR SSPIVTRGRLTEP+G+GRVH+NG V DT + K
Sbjct: 334 RSRTGVSSAMKGNPETMGSLNAPRRHSSPIVTRGRLTEPSGKGRVHSNGHVADTPEPRKV 393
Query: 392 SHVLEASTRKPVKASP---DSTGFGRTISKKSLDMAIRHMDVKNGTNGTRPVMNSSLFPQ 222
SHV E R+PVK+S DSTGFGRTISKKSLDMAIRHMD++NGT R + +++LFPQ
Sbjct: 394 SHVSEVGIRRPVKSSSAASDSTGFGRTISKKSLDMAIRHMDIRNGTGSARSLSSTTLFPQ 453
Query: 221 SIRSANSRSQPGRSTSGPASL-DGNMPINDNRIISENGNYLNRYPENVNLENKYPISSRL 45
SIRS +SQ RS S+ +GN + N + ++ + +R E + N S++L
Sbjct: 454 SIRSTTPKSQSVRSQRTQESINNGN---SQNGDVLDDEIHFSRAAEIGHEANDGRYSAKL 510
Query: 44 TAVDMYESSRYDAI 3
+ VD+YESSRYDAI
Sbjct: 511 SDVDIYESSRYDAI 524
Score = 166 bits (421), Expect = 2e-38
Identities = 92/131 (70%), Positives = 110/131 (83%), Gaps = 4/131 (3%)
Frame = -2
Query: 1409 LSVKLGRLSLGSAKQQPKSGFDDLLSSVDGGKNDYDWLLTPPGTPLFPSSDGSETQPALL 1230
+SVKL RL++GSAK +SG DDLLSS +GGK+DYDWLLTPPGTPL P S+GSE++P +
Sbjct: 49 VSVKLERLAVGSAKFA-RSGIDDLLSSTEGGKHDYDWLLTPPGTPLSPPSEGSESKPTSV 107
Query: 1229 APRKSS--RSVSTTKA-SRLSVSESENIHPARPARSSSVTRPAVSSTKYSTYSKN-GTSI 1062
APR SS RS STTKA SRLSVS+SE+ H +RP RSSSVTRP++SS++YSTYS N +SI
Sbjct: 108 APRSSSLARSTSTTKAVSRLSVSQSESYHSSRPTRSSSVTRPSISSSQYSTYSSNRSSSI 167
Query: 1061 LNTSSASVSSY 1029
LNTSSASVSSY
Sbjct: 168 LNTSSASVSSY 178
>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
gi|223531882|gb|EEF33699.1| DNA binding protein, putative
[Ricinus communis]
Length = 580
Score = 205 bits (522), Expect = 3e-50
Identities = 119/254 (46%), Positives = 157/254 (61%), Gaps = 4/254 (1%)
Frame = -2
Query: 752 GPTTSVSRNLSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETPPNLRTTLPDRPLSA 573
GP+ S R SNG L+TPPNLRTTLPDRP+SA
Sbjct: 297 GPSISAGRVPSNGRISAPASRPSSPGPRIRPSQQPVVPPDFPLDTPPNLRTTLPDRPISA 356
Query: 572 GRSRPGSTLTVKGNVETQSPAAI-RRQSSPIVTRGRLTEPNGRGRVHANGQVTDTTDSHK 396
GRSRPG++ T+KG+ ET + RR SSPIV+RGRL E G+GR H+NG D ++ K
Sbjct: 357 GRSRPGASTTIKGSPETTGATNVPRRHSSPIVSRGRLAEAPGKGRAHSNGHAADISEPRK 416
Query: 395 ASHVLEASTRKPVKAS---PDSTGFGRTISKKSLDMAIRHMDVKNGTNGTRPVMNSSLFP 225
SHV + RKPVK+S D+ GFGRTISKKSLDMAIRHMD++ G TR + +++LFP
Sbjct: 417 VSHVSDPGMRKPVKSSVTTTDNNGFGRTISKKSLDMAIRHMDIRTGNGSTRALSSTTLFP 476
Query: 224 QSIRSANSRSQPGRSTSGPASLDGNMPINDNRIISENGNYLNRYPENVNLENKYPISSRL 45
QSIR+A +++Q R + P S N+N I ENG++++R E + N S++L
Sbjct: 477 QSIRTA-TKAQSVRPMNAPES-------NNNGGILENGHHVSRPVEYGSEVNDGRYSAKL 528
Query: 44 TAVDMYESSRYDAI 3
+ VD+YESSRYDA+
Sbjct: 529 SEVDIYESSRYDAL 542
Score = 179 bits (453), Expect = 3e-42
Identities = 95/130 (73%), Positives = 113/130 (86%), Gaps = 3/130 (2%)
Frame = -2
Query: 1409 LSVKLGRLSLGSAKQQPKSGFDDLLSSVDGGKNDYDWLLTPPGTPLFPSSDGSETQPALL 1230
+S+KLGR+S+GSAK KSG DDLLSS DGGK+DYDWLLTPPGTPLFP+SDGS++QP L+
Sbjct: 74 VSMKLGRVSVGSAKVA-KSGIDDLLSSTDGGKHDYDWLLTPPGTPLFPTSDGSDSQPTLV 132
Query: 1229 APRKS--SRSVSTTKASRLSVSESENIHPARPARSSSVTRPAVSSTKYSTYSKN-GTSIL 1059
APR SRSVSTTKASRLSVS+SE+ H +RP RSSSVTR ++S+++YSTYS N +SIL
Sbjct: 133 APRSRSLSRSVSTTKASRLSVSQSESQHSSRPTRSSSVTRSSISNSQYSTYSSNRSSSIL 192
Query: 1058 NTSSASVSSY 1029
NTSSASVSSY
Sbjct: 193 NTSSASVSSY 202
>ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797203 [Glycine max]
Length = 698
Score = 189 bits (480), Expect = 2e-45
Identities = 112/220 (50%), Positives = 155/220 (70%), Gaps = 13/220 (5%)
Frame = -2
Query: 623 ETPPNLRTTLPDRPLSAGRSRPGSTLTVKGNV-ETQ-SPAAI-RRQSSPIVTRGRLTEPN 453
ETPPNLRTTLPDRP+SAGRSRPG +T+K NV ETQ SP + RR SSPIV+RGR+TEP
Sbjct: 447 ETPPNLRTTLPDRPVSAGRSRPGG-VTMKANVSETQASPVTMPRRHSSPIVSRGRVTEPA 505
Query: 452 GRGRVHANGQVTDTTDSHKASHVLEASTRKPVKAS---PDSTGFGRTISKKSLDMAIRHM 282
+ R ++NG D ++ K SH E + RK +++S PD+TGFGRTISKKSLDMAI+HM
Sbjct: 506 AKTRGYSNGHHADASEPRKVSHAPEVAARKSIRSSTTAPDNTGFGRTISKKSLDMAIKHM 565
Query: 281 DVKNGTNGTRPVMNSSLFPQSIRSANSRSQPGRSTSGPASLDGNMPINDNRIISENG--- 111
D++N + R + +++LFPQSIR++ S+S R +S PAS+D +N + I S+NG
Sbjct: 566 DIRNSSGNIRSLSSTTLFPQSIRTSTSKSH--RVSSAPASVD----MNGSMISSKNGANF 619
Query: 110 NYLNRYPENVNLE----NKYPISSRLTAVDMYESSRYDAI 3
+ N N+ ++ ++ S++L+ VD+YESSRYDA+
Sbjct: 620 DVGNGIDRNMMMKGRDADERQYSAKLSEVDIYESSRYDAL 659
Score = 155 bits (391), Expect = 5e-35
Identities = 88/133 (66%), Positives = 109/133 (81%), Gaps = 5/133 (3%)
Frame = -2
Query: 1409 LSVKLGRLSLGSAKQQPKSGFDDLLSSVDGGKNDYDWLLTPPGTPLFPSSDGSETQPALL 1230
+SVKLGRLS+G+AK +SG DDLLSS +GGK+DYDWLLTPPGTP+FPS E+Q L
Sbjct: 173 VSVKLGRLSVGTAKPV-RSGIDDLLSSTEGGKHDYDWLLTPPGTPVFPSE--GESQTTLA 229
Query: 1229 APRKS-SRSVSTTKASRLSVSESENIHPARPARSSSVTRPAVSS--TKYSTYSKN--GTS 1065
PR+S +RS ST+KASRL+VS+SEN P+RPARSSSVTR ++S+ ++YS+YS N +S
Sbjct: 230 PPRRSLTRSTSTSKASRLAVSQSENNPPSRPARSSSVTRSSISTSHSQYSSYSSNRHSSS 289
Query: 1064 ILNTSSASVSSYI 1026
ILNTSSASVSSYI
Sbjct: 290 ILNTSSASVSSYI 302