BLASTX nr result

ID: Bupleurum21_contig00008951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008951
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307832.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
gb|AAK11255.1|AF329729_1 regulator of gene silencing [Nicotiana ...   162   9e-38
gb|AFU81780.1| regulator of gene silencing [Nicotiana benthamiana]    162   9e-38
gb|AAM95458.1| calmodulin-like protein [Datura metel]                 161   1e-37
emb|CBI40801.3| unnamed protein product [Vitis vinifera]              161   2e-37

>ref|XP_002307832.1| predicted protein [Populus trichocarpa] gi|222857281|gb|EEE94828.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  164 bits (414), Expect = 2e-38
 Identities = 91/185 (49%), Positives = 112/185 (60%), Gaps = 23/185 (12%)
 Frame = +3

Query: 51  SPSPNSN------QSFHPTEPPNM-PADHPTPV----------------MEQVFNHFDEN 161
           SPS NS+      +   P +P N  P   P P                 +++VFN+FDE+
Sbjct: 13  SPSGNSSPLARLRRKLSPRKPDNNHPVSLPAPTNVNNSTSAINVIGNNQLQRVFNYFDED 72

Query: 162 HDGKISPTELQNCVKTVGGDLSKEEAETAVQLSDSDEDGMLNMKEFSKLVQEKTSGVAAD 341
            DG+ISP EL++C+ TVGG LS EEAE AV  SD D DG+L  ++F  L+    S     
Sbjct: 73  GDGRISPAELRSCITTVGGQLSIEEAEAAVSFSDMDGDGLLGFQDFQCLMAGSASEEEKT 132

Query: 342 EELREAFRMYTAAEGKGCITPKSLKRMLSRLGQANSVEDCKAMITKFDLNGDGVLDFDEF 521
           EELR+AF MY    G GCITP SLKRMLSRLG++ S+ DCKAMI  FDLNGDGVL F EF
Sbjct: 133 EELRQAFGMYETEPGSGCITPTSLKRMLSRLGKSRSINDCKAMIRTFDLNGDGVLSFHEF 192

Query: 522 RNMMK 536
             MM+
Sbjct: 193 SVMMR 197


>gb|AAK11255.1|AF329729_1 regulator of gene silencing [Nicotiana tabacum]
          Length = 190

 Score =  162 bits (409), Expect = 9e-38
 Identities = 80/135 (59%), Positives = 105/135 (77%)
 Frame = +3

Query: 129 MEQVFNHFDENHDGKISPTELQNCVKTVGGDLSKEEAETAVQLSDSDEDGMLNMKEFSKL 308
           +E+VF +FDEN DGK+SP EL+ CVK VGG+L+ EEAE AV+LSDSD DG+L +++F+KL
Sbjct: 55  LERVFTYFDENGDGKVSPAELRRCVKAVGGELTVEEAEMAVRLSDSDGDGLLGLEDFTKL 114

Query: 309 VQEKTSGVAADEELREAFRMYTAAEGKGCITPKSLKRMLSRLGQANSVEDCKAMITKFDL 488
           ++        + EL  AF MY   EG G ITPKSLK MLSRLG++ S+++CKAMI +FD+
Sbjct: 115 MEGMEEERNKESELIGAFGMY-EMEGSGYITPKSLKMMLSRLGESTSIDNCKAMIQRFDI 173

Query: 489 NGDGVLDFDEFRNMM 533
           NGDGVL+FDEF+ MM
Sbjct: 174 NGDGVLNFDEFKAMM 188


>gb|AFU81780.1| regulator of gene silencing [Nicotiana benthamiana]
          Length = 188

 Score =  162 bits (409), Expect = 9e-38
 Identities = 79/135 (58%), Positives = 105/135 (77%)
 Frame = +3

Query: 129 MEQVFNHFDENHDGKISPTELQNCVKTVGGDLSKEEAETAVQLSDSDEDGMLNMKEFSKL 308
           +E+VF +FD+N DGK+SP EL+ CVK VGG+L+ EEAE AV+LSDSD DG+L +++F+KL
Sbjct: 53  LERVFTYFDDNGDGKVSPAELRRCVKAVGGELTVEEAEMAVRLSDSDGDGLLGLEDFTKL 112

Query: 309 VQEKTSGVAADEELREAFRMYTAAEGKGCITPKSLKRMLSRLGQANSVEDCKAMITKFDL 488
           ++        + EL  AF MY   EG G +TPKSLKRMLSRLG++ S+++CKAMI +FD+
Sbjct: 113 MEGMEEERNKESELIGAFGMY-EMEGSGYVTPKSLKRMLSRLGESTSIDNCKAMIQRFDI 171

Query: 489 NGDGVLDFDEFRNMM 533
           NGDGVL FDEF+ MM
Sbjct: 172 NGDGVLSFDEFKVMM 186


>gb|AAM95458.1| calmodulin-like protein [Datura metel]
          Length = 191

 Score =  161 bits (408), Expect = 1e-37
 Identities = 80/135 (59%), Positives = 104/135 (77%)
 Frame = +3

Query: 129 MEQVFNHFDENHDGKISPTELQNCVKTVGGDLSKEEAETAVQLSDSDEDGMLNMKEFSKL 308
           +E+VF +FDEN DGK+SP EL+ CV+ VGG+L++EEAE AV+LSDSD DG+L +++F+KL
Sbjct: 56  LERVFTYFDENGDGKVSPVELRRCVRAVGGELTEEEAEMAVRLSDSDGDGLLGLEDFTKL 115

Query: 309 VQEKTSGVAADEELREAFRMYTAAEGKGCITPKSLKRMLSRLGQANSVEDCKAMITKFDL 488
           ++        + EL  AF MY   EG G ITPKSLKRMLSRLG++ S++ CK MI +FDL
Sbjct: 116 MEGMEEERNKESELIGAFGMYEEKEG-GYITPKSLKRMLSRLGESTSIDKCKVMIRRFDL 174

Query: 489 NGDGVLDFDEFRNMM 533
           NGDGVL FDEF+ MM
Sbjct: 175 NGDGVLSFDEFKVMM 189


>emb|CBI40801.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  161 bits (407), Expect = 2e-37
 Identities = 78/136 (57%), Positives = 103/136 (75%)
 Frame = +3

Query: 129 MEQVFNHFDENHDGKISPTELQNCVKTVGGDLSKEEAETAVQLSDSDEDGMLNMKEFSKL 308
           +++VF +FD+N DGKISP ELQ+CV+ VGG+LS +EAE AV+ SD D DGML M++F  L
Sbjct: 71  LQRVFRYFDKNGDGKISPEELQSCVRAVGGELSAKEAEAAVKSSDMDGDGMLGMEDFEML 130

Query: 309 VQEKTSGVAADEELREAFRMYTAAEGKGCITPKSLKRMLSRLGQANSVEDCKAMITKFDL 488
           ++         ++L+EAF MY   EG GCITPKSLKR+LSRLG++ ++EDCK MI  FD+
Sbjct: 131 MEANGEEEEKTKDLKEAFGMY-EMEGSGCITPKSLKRVLSRLGESKTIEDCKVMIHMFDI 189

Query: 489 NGDGVLDFDEFRNMMK 536
           NGDGVL F+EF  MM+
Sbjct: 190 NGDGVLSFEEFSAMMR 205


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