BLASTX nr result

ID: Bupleurum21_contig00008928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008928
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron...   113   2e-23
gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron...   113   2e-23
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   110   1e-22
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   110   1e-22
ref|XP_003518578.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   109   2e-22

>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 PCNCDGVCLVCKATPSADEKLICTTCATPWHISCLAI--SAAVSNLHWECPDCTTLVT-- 112
           PC+ DG+C++CK +PS +EKL+C TCATPWH+ CL+    +  S L W CPDC+   +  
Sbjct: 8   PCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSVD 67

Query: 111 ---SPAAGAGESSELVAAIRAIEADVSLNDREKAKKRQEL 1
              +P+     S++L++A+RAIEAD SLND EKA++RQEL
Sbjct: 68  SKPAPSVAGSLSNDLISAVRAIEADESLNDEEKARRRQEL 107


>gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 PCNCDGVCLVCKATPSADEKLICTTCATPWHISCLAI--SAAVSNLHWECPDCTTLVT-- 112
           PC+ DG+C++CK +PS +EKL+C TCATPWH+ CL+    +  S L W CPDC+   +  
Sbjct: 8   PCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSVD 67

Query: 111 ---SPAAGAGESSELVAAIRAIEADVSLNDREKAKKRQEL 1
              +P+     S++L++A+RAIEAD SLND EKA++RQEL
Sbjct: 68  SKPAPSVAGSLSNDLISAVRAIEADESLNDEEKARRRQEL 107


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 PCNCDGVCLVCKATPSADEKLICTTCATPWHISCLAI--SAAVSNLHWECPDCTTL---V 115
           PC+ DG+C++CKA PS  E + C TC TPWH+SCL+       S L W+CPDC+T    V
Sbjct: 26  PCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCSTPPEDV 85

Query: 114 TSPAAG-----AGESSELVAAIRAIEADVSLNDREKAKKRQEL 1
             P  G        SS+LV +IRAIEADVSL DREKA KRQEL
Sbjct: 86  ILPPPGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQEL 128


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 PCNCDGVCLVCKATPSADEKLICTTCATPWHISCLAI--SAAVSNLHWECPDCTTL---V 115
           PC+ DG+C++CKA PS  E + C TC TPWH+SCL+       S L W+CPDC+T    V
Sbjct: 26  PCDGDGICMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCSTPPEDV 85

Query: 114 TSPAAG-----AGESSELVAAIRAIEADVSLNDREKAKKRQEL 1
             P  G        SS+LV +IRAIEADVSL DREKA KRQEL
Sbjct: 86  ILPPPGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQEL 128


>ref|XP_003518578.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max]
          Length = 637

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = -1

Query: 279 PCNCDGVCLVCKATPSADEKLICTTCATPWHISCL-AISAAVSNLHWECPDCTTLVTSPA 103
           PC+ DGVC++CK  PS  + L C TCATPWH+SCL +   ++S+ HW+CPDC+   TS  
Sbjct: 16  PCDSDGVCMLCKQKPSPSQTLSCRTCATPWHLSCLPSAPLSLSDSHWDCPDCSD--TSNH 73

Query: 102 AGAGESSELVAAIRAIEADVSLNDREKAKKRQEL 1
                +++LV+A+ AI+AD SL D+EKAKKRQEL
Sbjct: 74  YPVAPTADLVSAVHAIQADTSLTDQEKAKKRQEL 107


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