BLASTX nr result

ID: Bupleurum21_contig00008925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008925
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19761.3| unnamed protein product [Vitis vinifera]              472   e-131
ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy...   472   e-131
ref|XP_002510449.1| uroporphyrin-III methyltransferase, putative...   446   e-123
ref|NP_001242889.1| uncharacterized protein LOC100819709 [Glycin...   436   e-120
ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methy...   434   e-119

>emb|CBI19761.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  472 bits (1215), Expect = e-131
 Identities = 234/290 (80%), Positives = 263/290 (90%)
 Frame = +2

Query: 365  GILKPGLYLVGTPIGNLEDITLRALRVLKSADLILSEDTRHSGKLLQHYNITTPLLSYHK 544
            G LKPGLYLVGTPIGNLEDIT RALRVL+SA++ILSEDTRHSGKLLQHY+I TPLLSYHK
Sbjct: 85   GHLKPGLYLVGTPIGNLEDITFRALRVLRSANVILSEDTRHSGKLLQHYDIKTPLLSYHK 144

Query: 545  FNEFQREQAVLKRLQDGEIVALISDAGTPGISDPGMDLAKLCVDENILVTPIPGPSALVT 724
            FNE +REQ VLKRL++G+IVALISDAGTPGISDPGM+LAKLCVDENI V PIPGPSALV 
Sbjct: 145  FNESRREQTVLKRLREGDIVALISDAGTPGISDPGMELAKLCVDENIPVIPIPGPSALVA 204

Query: 725  AVSAAGLPNNEFTFVGFLPKHAGTRKERLLISANEATTQIFFVPPHKLSQFLEETSSVFG 904
            A+SA+GL  NEFTFVGFLPKHAG+R+ERL +SANEA TQ+FFVPPHKL QFLEETSS+FG
Sbjct: 205  ALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAATQVFFVPPHKLHQFLEETSSLFG 264

Query: 905  DSRKCVMARELTKIHEEFWRGTLGDAKVVFSNRNAKGEITFLIEGKEICIAETPSDSQLE 1084
            D+R+CV+ARE+TKIHEEFWRGTLG AK  FSN + KGEIT LIEGKE C+ E PS+ QLE
Sbjct: 265  DTRRCVIAREMTKIHEEFWRGTLGKAKEAFSNHHPKGEITLLIEGKESCVVENPSEFQLE 324

Query: 1085 NELGELISNGHSLSEAVKLVATGTSTRRKTIYSLALRKFGKQVEAENDTS 1234
            N+LG+LIS GHSLS AVKLVA GTS RRKTIYSLALRKFGKQ+EAE+D++
Sbjct: 325  NKLGDLISKGHSLSMAVKLVAEGTSMRRKTIYSLALRKFGKQLEAEDDSN 374


>ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
            [Vitis vinifera]
          Length = 351

 Score =  472 bits (1215), Expect = e-131
 Identities = 234/290 (80%), Positives = 263/290 (90%)
 Frame = +2

Query: 365  GILKPGLYLVGTPIGNLEDITLRALRVLKSADLILSEDTRHSGKLLQHYNITTPLLSYHK 544
            G LKPGLYLVGTPIGNLEDIT RALRVL+SA++ILSEDTRHSGKLLQHY+I TPLLSYHK
Sbjct: 62   GHLKPGLYLVGTPIGNLEDITFRALRVLRSANVILSEDTRHSGKLLQHYDIKTPLLSYHK 121

Query: 545  FNEFQREQAVLKRLQDGEIVALISDAGTPGISDPGMDLAKLCVDENILVTPIPGPSALVT 724
            FNE +REQ VLKRL++G+IVALISDAGTPGISDPGM+LAKLCVDENI V PIPGPSALV 
Sbjct: 122  FNESRREQTVLKRLREGDIVALISDAGTPGISDPGMELAKLCVDENIPVIPIPGPSALVA 181

Query: 725  AVSAAGLPNNEFTFVGFLPKHAGTRKERLLISANEATTQIFFVPPHKLSQFLEETSSVFG 904
            A+SA+GL  NEFTFVGFLPKHAG+R+ERL +SANEA TQ+FFVPPHKL QFLEETSS+FG
Sbjct: 182  ALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAATQVFFVPPHKLHQFLEETSSLFG 241

Query: 905  DSRKCVMARELTKIHEEFWRGTLGDAKVVFSNRNAKGEITFLIEGKEICIAETPSDSQLE 1084
            D+R+CV+ARE+TKIHEEFWRGTLG AK  FSN + KGEIT LIEGKE C+ E PS+ QLE
Sbjct: 242  DTRRCVIAREMTKIHEEFWRGTLGKAKEAFSNHHPKGEITLLIEGKESCVVENPSEFQLE 301

Query: 1085 NELGELISNGHSLSEAVKLVATGTSTRRKTIYSLALRKFGKQVEAENDTS 1234
            N+LG+LIS GHSLS AVKLVA GTS RRKTIYSLALRKFGKQ+EAE+D++
Sbjct: 302  NKLGDLISKGHSLSMAVKLVAEGTSMRRKTIYSLALRKFGKQLEAEDDSN 351


>ref|XP_002510449.1| uroporphyrin-III methyltransferase, putative [Ricinus communis]
            gi|223551150|gb|EEF52636.1| uroporphyrin-III
            methyltransferase, putative [Ricinus communis]
          Length = 363

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/287 (77%), Positives = 254/287 (88%)
 Frame = +2

Query: 365  GILKPGLYLVGTPIGNLEDITLRALRVLKSADLILSEDTRHSGKLLQHYNITTPLLSYHK 544
            G LKPGLYLVGTPIGNLEDITLRALRVLKSA +IL+EDTRHSGKLL +YNITTPLLSYHK
Sbjct: 74   GALKPGLYLVGTPIGNLEDITLRALRVLKSAQVILAEDTRHSGKLLHYYNITTPLLSYHK 133

Query: 545  FNEFQREQAVLKRLQDGEIVALISDAGTPGISDPGMDLAKLCVDENILVTPIPGPSALVT 724
            FNE QRE  VLKRL+ GEIVALISDAG PGISDPG  LAKLCVDENI V PIPGPSA+V 
Sbjct: 134  FNESQRECLVLKRLKQGEIVALISDAGMPGISDPGAQLAKLCVDENIPVIPIPGPSAVVA 193

Query: 725  AVSAAGLPNNEFTFVGFLPKHAGTRKERLLISANEATTQIFFVPPHKLSQFLEETSSVFG 904
            A+SA+GL  +EFTFVGFL KHA +R+ERL+ SA+E  TQIF+VPPHKLS+FL+ETS++FG
Sbjct: 194  AISASGLSTDEFTFVGFLSKHARSRRERLIASADETRTQIFYVPPHKLSRFLDETSTLFG 253

Query: 905  DSRKCVMARELTKIHEEFWRGTLGDAKVVFSNRNAKGEITFLIEGKEICIAETPSDSQLE 1084
            DSR+CV+ARE+TKIHEEFWRGTLG+AK  F++   KGEIT LIEGK  C+ ETPS+SQLE
Sbjct: 254  DSRRCVIAREMTKIHEEFWRGTLGEAKEAFADHQPKGEITLLIEGKINCLVETPSESQLE 313

Query: 1085 NELGELISNGHSLSEAVKLVATGTSTRRKTIYSLALRKFGKQVEAEN 1225
            ++LG+LISNGHSLS AVKLVA GTS +RKT+YSLALRKFGKQVE E+
Sbjct: 314  HDLGDLISNGHSLSMAVKLVAEGTSMKRKTLYSLALRKFGKQVEVED 360


>ref|NP_001242889.1| uncharacterized protein LOC100819709 [Glycine max]
            gi|255635241|gb|ACU17975.1| unknown [Glycine max]
          Length = 352

 Score =  436 bits (1122), Expect = e-120
 Identities = 214/288 (74%), Positives = 253/288 (87%)
 Frame = +2

Query: 371  LKPGLYLVGTPIGNLEDITLRALRVLKSADLILSEDTRHSGKLLQHYNITTPLLSYHKFN 550
            LKPGLYLVGTPIGNLEDITLRA+RVL SAD+ILSEDTRHSGKLL HYNI TPL+SYHKFN
Sbjct: 65   LKPGLYLVGTPIGNLEDITLRAIRVLNSADVILSEDTRHSGKLLHHYNIKTPLMSYHKFN 124

Query: 551  EFQREQAVLKRLQDGEIVALISDAGTPGISDPGMDLAKLCVDENILVTPIPGPSALVTAV 730
            E  REQ VL+RL+ GEIVALISDAG PGISDPG +LAKLCV ENILV PIPGP ALV+A+
Sbjct: 125  ESHREQLVLRRLKQGEIVALISDAGMPGISDPGTELAKLCVSENILVVPIPGPCALVSAL 184

Query: 731  SAAGLPNNEFTFVGFLPKHAGTRKERLLISANEATTQIFFVPPHKLSQFLEETSSVFGDS 910
            SA+GLP +EFTFVGFLPKH+G+R++RL++SA++ TTQIF+VPPHKLSQFL+E+SS+FGD+
Sbjct: 185  SASGLPTDEFTFVGFLPKHSGSRRKRLMVSADQTTTQIFYVPPHKLSQFLDESSSIFGDA 244

Query: 911  RKCVMARELTKIHEEFWRGTLGDAKVVFSNRNAKGEITFLIEGKEICIAETPSDSQLENE 1090
            R+CV+ARE+TK+HEEFW GTLG+AK VFS R  KGE+T LIEGK     E PSD++LE+E
Sbjct: 245  RQCVIAREMTKLHEEFWHGTLGEAKEVFSIRQVKGELTILIEGKANSKVEPPSDTELESE 304

Query: 1091 LGELISNGHSLSEAVKLVATGTSTRRKTIYSLALRKFGKQVEAENDTS 1234
            L ELI+ G SLS AVKLV + TS  RKTIYSLALRKFGKQ+E ++D++
Sbjct: 305  LRELIAGGESLSTAVKLVTSRTSVSRKTIYSLALRKFGKQLEVDDDSN 352


>ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
            [Cucumis sativus] gi|449515758|ref|XP_004164915.1|
            PREDICTED: ribosomal RNA small subunit methyltransferase
            I-like [Cucumis sativus]
          Length = 365

 Score =  434 bits (1117), Expect = e-119
 Identities = 217/289 (75%), Positives = 248/289 (85%)
 Frame = +2

Query: 365  GILKPGLYLVGTPIGNLEDITLRALRVLKSADLILSEDTRHSGKLLQHYNITTPLLSYHK 544
            G LKPGLYLVGTPIGNLEDITLRALRVLKSA +ILSEDTRHSGKLLQH++I TPLLS+HK
Sbjct: 75   GSLKPGLYLVGTPIGNLEDITLRALRVLKSAHVILSEDTRHSGKLLQHFSIKTPLLSFHK 134

Query: 545  FNEFQREQAVLKRLQDGEIVALISDAGTPGISDPGMDLAKLCVDENILVTPIPGPSALVT 724
            FNE QREQ VLKRL+ GEIVALISDAGTPGISDPG +L +LCV+ENI V P+PGPSA+V 
Sbjct: 135  FNESQREQTVLKRLKQGEIVALISDAGTPGISDPGTELVRLCVNENIPVVPVPGPSAVVA 194

Query: 725  AVSAAGLPNNEFTFVGFLPKHAGTRKERLLISANEATTQIFFVPPHKLSQFLEETSSVFG 904
            A+SA+GL  +EFTFVGFLPKHA +R+ERL++SANE  TQIF+VPPHKL QFLEETS +FG
Sbjct: 195  AISASGLSTDEFTFVGFLPKHAASRRERLMVSANEEATQIFYVPPHKLKQFLEETSQLFG 254

Query: 905  DSRKCVMARELTKIHEEFWRGTLGDAKVVFSNRNAKGEITFLIEGKEICIAETPSDSQLE 1084
            +SR+CV+ARE+TKIHEEFWRGTL +AK  FS    KGEIT LIEGK     ETPS+SQLE
Sbjct: 255  ESRRCVIAREMTKIHEEFWRGTLAEAKEFFSLNQTKGEITLLIEGKLCPEVETPSESQLE 314

Query: 1085 NELGELISNGHSLSEAVKLVATGTSTRRKTIYSLALRKFGKQVEAENDT 1231
             EL ELIS GH LS AVKLVA+ TST RKT+YS+ALR+FG Q+  END+
Sbjct: 315  KELEELISTGHRLSMAVKLVASKTSTSRKTVYSIALRRFGNQLGVENDS 363


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