BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008920
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            366   6e-99
ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lyc...   362   2e-97
gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]           351   2e-94
gb|ACM45083.1| shikimate kinase [Vitis vinifera]                      341   2e-91
ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [...   341   2e-91

>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  366 bits (940), Expect = 6e-99
 Identities = 192/295 (65%), Positives = 235/295 (79%), Gaps = 2/295 (0%)
 Frame = -2

Query: 1125 MAAKVSNCIQFPVSNSSERKVLKRDYILQYHSRCKEE-RFPVLISSSLPPK-KAATYHRS 952
            M  KV+N +       SER   +    ++   R +E+ R PVL+S+ L  K + + +H++
Sbjct: 1    MDGKVANGLVVSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKT 60

Query: 951  VALKLSCSPQNYEASVLESGTFPASFDEALILKNKSEEIEPYLNGRCIYLVGMMGSGKTT 772
             +L++SCS +N+ ASVLESG   A FD+ALILKNKS+EIEPYL+GRCIYLVGMMGSGKTT
Sbjct: 61   ASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTT 120

Query: 771  VGKILSEVLGYSFFDSDRLIEQSVGGVPVSDIFKFHGESFFRDNETEVLQKLSSMQRLVV 592
            VGK+LS+VL Y+FFDSD L+EQ V    V++IF  +GE FFRD ETEVL+KLS M RLVV
Sbjct: 121  VGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVV 180

Query: 591  STGGGAVIRPINWRHMQKGISVWLDVPLEALARRITAVGTGSRPLLHNESGDAYTKTFKR 412
            STGGGAV+RPINW++MQKGISVWLDVPLEALARRI AVGTGSRPLLH++SGDAYTKTF R
Sbjct: 181  STGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMR 240

Query: 411  LCTLWENRSEAYTNASARVSLENIAAKLGYKDVCNVTPTAIATEALVQIEYALKK 247
            L +L E RSEAY NA+ARVSLE++AAKLG++DV N+TPTAIA EAL QIE  LK+
Sbjct: 241  LTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKE 295


>ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
            gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate
            kinase, chloroplastic; Flags: Precursor
            gi|19349|emb|CAA45121.1| shikimate kinase precursor
            [Solanum lycopersicum]
          Length = 300

 Score =  362 bits (928), Expect = 2e-97
 Identities = 191/293 (65%), Positives = 222/293 (75%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1125 MAAKVSNCIQFPVSNSSERKVLKRDYILQYHSRCKEE-RFPVLISSSLPPKKAATYHRSV 949
            M A+VS  +Q     +S++ V K   +L++  +  E+ R  V++S  L P+KAA   R V
Sbjct: 1    MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 948  ALKLSCSPQNYEASVLESGTFPASFDEALILKNKSEEIEPYLNGRCIYLVGMMGSGKTTV 769
             LK+SCSPQN +ASVLESG F AS DE   LKNK+EE+E YL+GRC+YLVGMMG GKTTV
Sbjct: 61   QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 768  GKILSEVLGYSFFDSDRLIEQSVGGVPVSDIFKFHGESFFRDNETEVLQKLSSMQRLVVS 589
            G+IL+E LGYSFFD DRLIEQ+VGG+ V++IF+  GESFFRDNETEVL KLS M RLVVS
Sbjct: 121  GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVS 180

Query: 588  TGGGAVIRPINWRHMQKGISVWLDVPLEALARRITAVGTGSRPLLHNESGDAYTKTFKRL 409
            TGGGAV+RPINWRHM KGISVWLDVPLEALA+RIT  GT SRPLLH ESGD Y  T KRL
Sbjct: 181  TGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRL 240

Query: 408  CTLWENRSEAYTNASARVSLENIAAKLGYKDVCNVTPTAIATEALVQIEYALK 250
             TL E R E Y NASARVSLENIA K   KDVC++TP  I  E L+QIE  LK
Sbjct: 241  TTLMETRGENYANASARVSLENIALK-REKDVCHITPAEITLEVLIQIENFLK 292


>gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
          Length = 298

 Score =  351 bits (901), Expect = 2e-94
 Identities = 185/295 (62%), Positives = 221/295 (74%), Gaps = 2/295 (0%)
 Frame = -2

Query: 1125 MAAKVSNCIQFPVSNSSERKVLKRDYILQYHSRC--KEERFPVLISSSLPPKKAATYHRS 952
            M AK++  +Q     SSE ++ K +  L + S+C  K  R  + IS    P KA ++HR 
Sbjct: 2    MEAKIARSLQLSPWISSENRLPKSNGSLSF-SKCQTKHRRSQMFISCHFQPIKAKSWHRP 60

Query: 951  VALKLSCSPQNYEASVLESGTFPASFDEALILKNKSEEIEPYLNGRCIYLVGMMGSGKTT 772
              L  SCS QN +AS++ES     S DE  +LK+KSEEIEP L+GRCIYLVGMMGSGKTT
Sbjct: 61   CLLTASCSSQNSQASIMESENSLPSLDEIQVLKSKSEEIEPCLSGRCIYLVGMMGSGKTT 120

Query: 771  VGKILSEVLGYSFFDSDRLIEQSVGGVPVSDIFKFHGESFFRDNETEVLQKLSSMQRLVV 592
            VG+I++E LGY+FFD D LIEQ+VGG  V++IFK HGE FFRDNETEVL+KLS M+ +VV
Sbjct: 121  VGRIIAEALGYAFFDCDTLIEQAVGGTSVAEIFKLHGEGFFRDNETEVLRKLSLMREVVV 180

Query: 591  STGGGAVIRPINWRHMQKGISVWLDVPLEALARRITAVGTGSRPLLHNESGDAYTKTFKR 412
            STGGGAV+RPINWR+M KGISVWLDVP++ALARRI+AVGT SRPLLHNESGD Y KT KR
Sbjct: 181  STGGGAVVRPINWRYMHKGISVWLDVPVDALARRISAVGTHSRPLLHNESGDIYAKTLKR 240

Query: 411  LCTLWENRSEAYTNASARVSLENIAAKLGYKDVCNVTPTAIATEALVQIEYALKK 247
            L TL + R +AY N+ ARV LENIAAK G  DVC +TPT IA EALVQI   LKK
Sbjct: 241  LSTLLDERGDAYANSKARVCLENIAAKSGCIDVCTITPTEIAIEALVQIGNFLKK 295


>gb|ACM45083.1| shikimate kinase [Vitis vinifera]
          Length = 300

 Score =  341 bits (875), Expect = 2e-91
 Identities = 174/292 (59%), Positives = 221/292 (75%)
 Frame = -2

Query: 1125 MAAKVSNCIQFPVSNSSERKVLKRDYILQYHSRCKEERFPVLISSSLPPKKAATYHRSVA 946
            M AK++  +QF     +++   +    L +  + +E+     IS    P++ + + + VA
Sbjct: 1    MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHP-ISCHFQPRRTSNWQKHVA 59

Query: 945  LKLSCSPQNYEASVLESGTFPASFDEALILKNKSEEIEPYLNGRCIYLVGMMGSGKTTVG 766
            L+ S S +N+ A +LESG+FP S DEALILKNKS+EI PY++GRC+YLVGMMGSGKTT+G
Sbjct: 60   LEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIG 119

Query: 765  KILSEVLGYSFFDSDRLIEQSVGGVPVSDIFKFHGESFFRDNETEVLQKLSSMQRLVVST 586
            KILSEVLGYSF DSD L+E +V G  V++IF  +GE FFR+ E+E LQKLS    +VVST
Sbjct: 120  KILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVST 179

Query: 585  GGGAVIRPINWRHMQKGISVWLDVPLEALARRITAVGTGSRPLLHNESGDAYTKTFKRLC 406
            GGGAVIRPINW++M KGISVWLDVPLEALARRI+AVGT SRPLLH++SGDAY +T  RL 
Sbjct: 180  GGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRTLTRLS 239

Query: 405  TLWENRSEAYTNASARVSLENIAAKLGYKDVCNVTPTAIATEALVQIEYALK 250
             LW+ R +AY NA+ARVSLE IAAKLG++DV N+TPT IA EAL+QIE  LK
Sbjct: 240  NLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLK 291


>ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
            gi|147772563|emb|CAN67344.1| hypothetical protein
            VITISV_038221 [Vitis vinifera]
            gi|296082504|emb|CBI21509.3| unnamed protein product
            [Vitis vinifera]
          Length = 301

 Score =  341 bits (875), Expect = 2e-91
 Identities = 174/292 (59%), Positives = 221/292 (75%)
 Frame = -2

Query: 1125 MAAKVSNCIQFPVSNSSERKVLKRDYILQYHSRCKEERFPVLISSSLPPKKAATYHRSVA 946
            M AK++  +QF     +++   +    L +  + +E+     IS    P++ + + + VA
Sbjct: 1    MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHP-ISCHFQPRRTSNWQKHVA 59

Query: 945  LKLSCSPQNYEASVLESGTFPASFDEALILKNKSEEIEPYLNGRCIYLVGMMGSGKTTVG 766
            L+ S S +N+ A +LESG+FP S DEALILKNKS+EI PY++GRC+YLVGMMGSGKTT+G
Sbjct: 60   LEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIG 119

Query: 765  KILSEVLGYSFFDSDRLIEQSVGGVPVSDIFKFHGESFFRDNETEVLQKLSSMQRLVVST 586
            KILSEVLGYSF DSD L+E +V G  V++IF  +GE FFR+ E+E LQKLS    +VVST
Sbjct: 120  KILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVST 179

Query: 585  GGGAVIRPINWRHMQKGISVWLDVPLEALARRITAVGTGSRPLLHNESGDAYTKTFKRLC 406
            GGGAVIRPINW++M KGISVWLDVPLEALARRI+AVGT SRPLLH++SGDAY +T  RL 
Sbjct: 180  GGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRTLTRLS 239

Query: 405  TLWENRSEAYTNASARVSLENIAAKLGYKDVCNVTPTAIATEALVQIEYALK 250
             LW+ R +AY NA+ARVSLE IAAKLG++DV N+TPT IA EAL+QIE  LK
Sbjct: 240  NLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLK 291