BLASTX nr result

ID: Bupleurum21_contig00008914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008914
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36572.1| ALF domain class transcription factor [Malus x do...   273   5e-92
ref|XP_002533379.1| phd/F-box containing protein, putative [Rici...   268   2e-91
ref|XP_002528085.1| phd/F-box containing protein, putative [Rici...   274   2e-91
gb|AFK45702.1| unknown [Lotus japonicus]                              272   1e-90
ref|XP_003638587.1| PHD finger protein [Medicago truncatula] gi|...   269   2e-90

>gb|ADL36572.1| ALF domain class transcription factor [Malus x domestica]
          Length = 238

 Score =  273 bits (698), Expect(2) = 5e-92
 Identities = 132/180 (73%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
 Frame = -3

Query: 748 VRALTYDVDEFYSLCDPEKENLCLYGHSNESWXXXXXXXXXXXXXXXXXLGINFARDGMN 569
           VRALTYDVDEFY LCDPEKENLCLYGH NE+W                 LGINFARDGMN
Sbjct: 23  VRALTYDVDEFYGLCDPEKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMN 82

Query: 568 RRDWLSLVAVHTDSWLISVAYYFGARLNRNERKRLFSLINDLPTVFEVVTERKATKEKPS 389
           R+DWLSLVAVH+DSWL+SVA+YFGARLNR+ERKRLFSLINDLPTVFEVVTERK  KEKPS
Sbjct: 83  RKDWLSLVAVHSDSWLLSVAFYFGARLNRSERKRLFSLINDLPTVFEVVTERKPVKEKPS 142

Query: 388 VDAGNKYKINTKRSSDGQAKSNQRM-TDESYVEDGDEHGETLCGYCAGNYNADEFWIGCD 212
           VD+G+K + +TKRS DG  KS  ++  DES+ ED DEH ETLCG C GNYNADEFWIGCD
Sbjct: 143 VDSGSKSRGSTKRSGDGLVKSTPKLPPDESFEEDDDEHSETLCGSCGGNYNADEFWIGCD 202



 Score = 91.3 bits (225), Expect(2) = 5e-92
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = -1

Query: 153 WIGCDICERWYHGKCVKITPAKAENIKQYKCPACSTKKGRQ 31
           WIGCDICE+W+HGKCVKITPAKAENIKQYKCP+CS K+GRQ
Sbjct: 198 WIGCDICEKWFHGKCVKITPAKAENIKQYKCPSCSLKRGRQ 238


>ref|XP_002533379.1| phd/F-box containing protein, putative [Ricinus communis]
           gi|223526772|gb|EEF28997.1| phd/F-box containing
           protein, putative [Ricinus communis]
          Length = 240

 Score =  268 bits (686), Expect(2) = 2e-91
 Identities = 126/179 (70%), Positives = 143/179 (79%)
 Frame = -3

Query: 748 VRALTYDVDEFYSLCDPEKENLCLYGHSNESWXXXXXXXXXXXXXXXXXLGINFARDGMN 569
           VRALTYDVDEFYS CDPEKENLCLYGH NESW                 LGINFARDGM+
Sbjct: 26  VRALTYDVDEFYSRCDPEKENLCLYGHPNESWEVTLPAEEVPPELPEPALGINFARDGMH 85

Query: 568 RRDWLSLVAVHTDSWLISVAYYFGARLNRNERKRLFSLINDLPTVFEVVTERKATKEKPS 389
           R+DWLSLVAVH+D WL+SVA+YFGARLNRNERKRLFSLINDLPT+F+VVT RK  K+KPS
Sbjct: 86  RKDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRLFSLINDLPTLFDVVTGRKPIKDKPS 145

Query: 388 VDAGNKYKINTKRSSDGQAKSNQRMTDESYVEDGDEHGETLCGYCAGNYNADEFWIGCD 212
           +D G+K +  TKRS DGQ ++N ++ DE+Y ED DEHGETLCG C G Y+ADEFWIGCD
Sbjct: 146 MDGGSKSRNGTKRSVDGQVRNNAKILDENYAEDEDEHGETLCGSCGGTYSADEFWIGCD 204



 Score = 94.0 bits (232), Expect(2) = 2e-91
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = -1

Query: 153 WIGCDICERWYHGKCVKITPAKAENIKQYKCPACSTKKGRQ 31
           WIGCD+CERWYHGKCVKITPAKAE IKQYKCP+CSTKKGRQ
Sbjct: 200 WIGCDVCERWYHGKCVKITPAKAEMIKQYKCPSCSTKKGRQ 240


>ref|XP_002528085.1| phd/F-box containing protein, putative [Ricinus communis]
           gi|223532474|gb|EEF34264.1| phd/F-box containing
           protein, putative [Ricinus communis]
          Length = 239

 Score =  274 bits (701), Expect(2) = 2e-91
 Identities = 129/179 (72%), Positives = 147/179 (82%)
 Frame = -3

Query: 748 VRALTYDVDEFYSLCDPEKENLCLYGHSNESWXXXXXXXXXXXXXXXXXLGINFARDGMN 569
           VRALT+DVDEFY LCDPEKENLCLYGH NESW                 LGINFARDGM+
Sbjct: 25  VRALTHDVDEFYGLCDPEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMD 84

Query: 568 RRDWLSLVAVHTDSWLISVAYYFGARLNRNERKRLFSLINDLPTVFEVVTERKATKEKPS 389
           R+DWLSLVAVH+DSWLISVA+YFGARLNRNERKRLFS+IND+PTVFEVVTERK  KEKPS
Sbjct: 85  RKDWLSLVAVHSDSWLISVAFYFGARLNRNERKRLFSMINDMPTVFEVVTERKVVKEKPS 144

Query: 388 VDAGNKYKINTKRSSDGQAKSNQRMTDESYVEDGDEHGETLCGYCAGNYNADEFWIGCD 212
           VD+G+K + + KRS+DGQ KSN ++T+E Y +D DEH ETLCG C G+Y+ADEFWIGCD
Sbjct: 145 VDSGSKSRGSIKRSNDGQVKSNPKLTEEVYEDDEDEHNETLCGSCGGSYSADEFWIGCD 203



 Score = 88.2 bits (217), Expect(2) = 2e-91
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -1

Query: 153 WIGCDICERWYHGKCVKITPAKAENIKQYKCPACSTKKGRQ 31
           WIGCDICERW+HGKCVKITPAKAE+IKQYKCP+CS K+ RQ
Sbjct: 199 WIGCDICERWFHGKCVKITPAKAESIKQYKCPSCSMKRNRQ 239


>gb|AFK45702.1| unknown [Lotus japonicus]
          Length = 238

 Score =  272 bits (696), Expect(2) = 1e-90
 Identities = 132/180 (73%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
 Frame = -3

Query: 748 VRALTYDVDEFYSLCDPEKENLCLYGHSNESWXXXXXXXXXXXXXXXXXLGINFARDGMN 569
           +RALT DVDEFY LCDP+KENLCLYGH NESW                 LGINFARDGMN
Sbjct: 23  LRALTQDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVPPELPEPALGINFARDGMN 82

Query: 568 RRDWLSLVAVHTDSWLISVAYYFGARLNRNERKRLFSLINDLPTVFEVVTERKATKEKPS 389
           RRDWLSLVAVH+DSWL+SVA+Y GARLNRNERKRLFSLINDLPTVFEVVTERK  K+KP+
Sbjct: 83  RRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINDLPTVFEVVTERKPIKDKPT 142

Query: 388 VDAGNKYKINTKRSSDGQAK-SNQRMTDESYVEDGDEHGETLCGYCAGNYNADEFWIGCD 212
           VD+G+K +  TKRSSDGQ K SN +  DE Y ED DEH ETLCG C GNYNADEFWIGCD
Sbjct: 143 VDSGSKSRGGTKRSSDGQVKSSNPKFADEGYEEDEDEHSETLCGSCGGNYNADEFWIGCD 202



 Score = 87.4 bits (215), Expect(2) = 1e-90
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 153 WIGCDICERWYHGKCVKITPAKAENIKQYKCPACSTKKGR 34
           WIGCD+CERWYHGKCVKITPAKAE+IKQYKCP+CS K+ R
Sbjct: 198 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSMKRSR 237


>ref|XP_003638587.1| PHD finger protein [Medicago truncatula]
           gi|355504522|gb|AES85725.1| PHD finger protein [Medicago
           truncatula]
          Length = 238

 Score =  269 bits (688), Expect(2) = 2e-90
 Identities = 128/180 (71%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
 Frame = -3

Query: 748 VRALTYDVDEFYSLCDPEKENLCLYGHSNESWXXXXXXXXXXXXXXXXXLGINFARDGMN 569
           VRALT DVDEFY+LCDP+K+NLCLYGH+NESW                 LGINFARDGMN
Sbjct: 23  VRALTQDVDEFYALCDPDKDNLCLYGHTNESWEVTLPAEEVPPELPEPALGINFARDGMN 82

Query: 568 RRDWLSLVAVHTDSWLISVAYYFGARLNRNERKRLFSLINDLPTVFEVVTERKATKEKPS 389
           RRDWLSLVAVH+DSWL+SVA+Y GARLNRNERKRLFSLIN+LPTVFEVVT+RK  K+KP+
Sbjct: 83  RRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINELPTVFEVVTDRKPIKDKPT 142

Query: 388 VDAGNKYKINTKRSSDGQAKSNQRMT-DESYVEDGDEHGETLCGYCAGNYNADEFWIGCD 212
           VD+G+K + +TKRSSDGQ KSN ++  D+ Y E+ DEH ETLCG C GNYNADEFWIGCD
Sbjct: 143 VDSGSKSRGSTKRSSDGQVKSNPKLVDDQGYEEEEDEHSETLCGSCGGNYNADEFWIGCD 202



 Score = 90.1 bits (222), Expect(2) = 2e-90
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -1

Query: 153 WIGCDICERWYHGKCVKITPAKAENIKQYKCPACSTKKGR 34
           WIGCDICERWYHGKCVKITPAKAE+IKQYKCP+CS K+GR
Sbjct: 198 WIGCDICERWYHGKCVKITPAKAESIKQYKCPSCSIKRGR 237


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