BLASTX nr result

ID: Bupleurum21_contig00008902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008902
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520975.1| trytophan synthase alpha subunit, putative [...   336   4e-90
gb|AFK33699.1| unknown [Lotus japonicus]                              332   6e-89
gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea]     330   3e-88
ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|2...   326   3e-87

>ref|XP_002520975.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223539812|gb|EEF41392.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 313

 Score =  336 bits (861), Expect = 4e-90
 Identities = 181/246 (73%), Positives = 199/246 (80%)
 Frame = -3

Query: 738 MAVALKSANTCFYRLNLKPNHTNLFSPNYINYSQKASAVTLSKSYNPPMAALTTVGNTVG 559
           MAVALKS  T F        H  + SP+Y           +S     PMA LT   N + 
Sbjct: 1   MAVALKST-TSFLHDRKPETHLLIRSPSY-------KPTVISTRRFAPMATLTAAKN-LS 51

Query: 558 LAQTFSNLKQQGKVALIPFLTAGDPDLSTTAEALKVLDSCGCDIIELGVPYSDPLADGPV 379
           L++TFSNLK++GKVA IP++TAGDPDLSTTAEALK+LDSCG DIIELGVPYSDPLADGPV
Sbjct: 52  LSETFSNLKKRGKVAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPV 111

Query: 378 IQAAATRSLAKGTNFDAIILMLKEVVPQLSCPIALFTYYNPILKRGVEKFMTTVKDAGVH 199
           IQAAATRSLA+GTNFDAI  MLKEVVPQLSCPIALFTYYNPILKRG+EKFM+TVKD GVH
Sbjct: 112 IQAAATRSLARGTNFDAITSMLKEVVPQLSCPIALFTYYNPILKRGIEKFMSTVKDIGVH 171

Query: 198 GLVVPDVPLEETELLRSEALKHQIELVLLTTPTTPRDRMNAIVEASEGFVYLVSSIGVTG 19
           GLVVPDVPLEETELLR+EA K  IELVLLTTPTTP +RM AIVEA+EGFVYLVSS+GVTG
Sbjct: 172 GLVVPDVPLEETELLRNEAAKKNIELVLLTTPTTPTERMKAIVEAAEGFVYLVSSVGVTG 231

Query: 18  ARGSVS 1
           AR SVS
Sbjct: 232 ARASVS 237


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  332 bits (851), Expect = 6e-89
 Identities = 177/246 (71%), Positives = 210/246 (85%)
 Frame = -3

Query: 738 MAVALKSANTCFYRLNLKPNHTNLFSPNYINYSQKASAVTLSKSYNPPMAALTTVGNTVG 559
           MA+ALKS+  CF+++  KP       P Y  +S K + + + +  N P+AA+ T+  TVG
Sbjct: 1   MAIALKSS--CFFQVK-KPEAG---FPVY--FSSKKAIIWVKR--NTPVAAIRTM-ETVG 49

Query: 558 LAQTFSNLKQQGKVALIPFLTAGDPDLSTTAEALKVLDSCGCDIIELGVPYSDPLADGPV 379
           L++TFS LK+QGKVA IP++TAGDPDLSTTAEALKVLDSCG DIIELGVPYSDPLADGPV
Sbjct: 50  LSETFSRLKKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPV 109

Query: 378 IQAAATRSLAKGTNFDAIILMLKEVVPQLSCPIALFTYYNPILKRGVEKFMTTVKDAGVH 199
           IQAAATRSLA+GTNF+AII MLKEV PQLSCP+ALF+YYNPILKRG +KFM+T++D+GVH
Sbjct: 110 IQAAATRSLARGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVH 169

Query: 198 GLVVPDVPLEETELLRSEALKHQIELVLLTTPTTPRDRMNAIVEASEGFVYLVSSIGVTG 19
           GLVVPDVPLEETE+LR+EA K+ IELVLLTTPTTP DRM AIV+A+EGFVYLVSS+GVTG
Sbjct: 170 GLVVPDVPLEETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTG 229

Query: 18  ARGSVS 1
           AR SVS
Sbjct: 230 ARASVS 235


>gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea]
          Length = 263

 Score =  330 bits (845), Expect = 3e-88
 Identities = 178/242 (73%), Positives = 200/242 (82%)
 Frame = -3

Query: 738 MAVALKSANTCFYRLNLKPNHTNLFSPNYINYSQKASAVTLSKSYNPPMAALTTVGNTVG 559
           MA+ALKSA  CF +L  KP        N+  +     A+   K Y P +AA+ T+  TVG
Sbjct: 1   MAIALKSA--CFLQLK-KPE------VNFQGFLPSKRAIVSVKRYTP-VAAIKTM-ETVG 49

Query: 558 LAQTFSNLKQQGKVALIPFLTAGDPDLSTTAEALKVLDSCGCDIIELGVPYSDPLADGPV 379
           L++TF+ LK+QGKVA IP++TAGDPDLSTTAEALKVLDSCG DIIELGVPYSDPLADGPV
Sbjct: 50  LSETFTRLKKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPV 109

Query: 378 IQAAATRSLAKGTNFDAIILMLKEVVPQLSCPIALFTYYNPILKRGVEKFMTTVKDAGVH 199
           IQAAATRSLAKGTNFDAII MLKEVVPQLSCPIALFTYYNPILKRG EKFM+T++D GVH
Sbjct: 110 IQAAATRSLAKGTNFDAIISMLKEVVPQLSCPIALFTYYNPILKRGTEKFMSTIRDCGVH 169

Query: 198 GLVVPDVPLEETELLRSEALKHQIELVLLTTPTTPRDRMNAIVEASEGFVYLVSSIGVTG 19
           GLVVPDVPLEET+ LR EA  + IELVLLTTPTTP +RM AIV+ASEGFVYLVSS+GVTG
Sbjct: 170 GLVVPDVPLEETKTLRMEAKNNGIELVLLTTPTTPTNRMKAIVDASEGFVYLVSSVGVTG 229

Query: 18  AR 13
           AR
Sbjct: 230 AR 231


>ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|222842533|gb|EEE80080.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  327 bits (839), Expect = 2e-87
 Identities = 171/246 (69%), Positives = 201/246 (81%)
 Frame = -3

Query: 738 MAVALKSANTCFYRLNLKPNHTNLFSPNYINYSQKASAVTLSKSYNPPMAALTTVGNTVG 559
           MA ALKS           P+   L  P   ++  +     +S     PMA+LT +  ++G
Sbjct: 1   MAAALKST----------PSFLQLKKPE-THFLVRHKPTIVSTRRFAPMASLTAI-RSLG 48

Query: 558 LAQTFSNLKQQGKVALIPFLTAGDPDLSTTAEALKVLDSCGCDIIELGVPYSDPLADGPV 379
           + +TFSNLK+QGKVALIP++TAGDPDL TTAEALKVLD+CGCDIIELGVPYSDPLADGPV
Sbjct: 49  IGETFSNLKKQGKVALIPYITAGDPDLKTTAEALKVLDACGCDIIELGVPYSDPLADGPV 108

Query: 378 IQAAATRSLAKGTNFDAIILMLKEVVPQLSCPIALFTYYNPILKRGVEKFMTTVKDAGVH 199
           IQAAATRSLA+GTNF+AI  ML+EVVPQ+SCPIALFTYYNPILKRG+EKFM+TVKD GVH
Sbjct: 109 IQAAATRSLARGTNFEAITSMLREVVPQVSCPIALFTYYNPILKRGIEKFMSTVKDIGVH 168

Query: 198 GLVVPDVPLEETELLRSEALKHQIELVLLTTPTTPRDRMNAIVEASEGFVYLVSSIGVTG 19
           GLVVPDVPLEET +LR EA+K+++ELVLLTTPTTP +RM AIVEA++GFVYLVSS+GVTG
Sbjct: 169 GLVVPDVPLEETGVLRKEAVKNKLELVLLTTPTTPTERMKAIVEAADGFVYLVSSVGVTG 228

Query: 18  ARGSVS 1
           AR SVS
Sbjct: 229 ARASVS 234


>ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|222857072|gb|EEE94619.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  326 bits (836), Expect = 3e-87
 Identities = 170/246 (69%), Positives = 200/246 (81%)
 Frame = -3

Query: 738 MAVALKSANTCFYRLNLKPNHTNLFSPNYINYSQKASAVTLSKSYNPPMAALTTVGNTVG 559
           MAVALKS           P+   L  P      +    +  ++ +  PMA+LT    ++G
Sbjct: 1   MAVALKST----------PSFLQLKKPETYFIVRNKPPIVSTRRF-APMASLTAT-RSLG 48

Query: 558 LAQTFSNLKQQGKVALIPFLTAGDPDLSTTAEALKVLDSCGCDIIELGVPYSDPLADGPV 379
           + +TFSNLK+QGKVALIP++TAGDPDLSTTAEALK+LD+CGCDIIELGVPYSDPLADGPV
Sbjct: 49  IGETFSNLKKQGKVALIPYITAGDPDLSTTAEALKLLDACGCDIIELGVPYSDPLADGPV 108

Query: 378 IQAAATRSLAKGTNFDAIILMLKEVVPQLSCPIALFTYYNPILKRGVEKFMTTVKDAGVH 199
           IQAAATRSLA+GTNF+AI  MLKEVVPQ+SCPIALFTYYNPILKRG+EKFM+TV D GVH
Sbjct: 109 IQAAATRSLARGTNFEAITSMLKEVVPQVSCPIALFTYYNPILKRGIEKFMSTVNDIGVH 168

Query: 198 GLVVPDVPLEETELLRSEALKHQIELVLLTTPTTPRDRMNAIVEASEGFVYLVSSIGVTG 19
           GLVVPDVPLEET++LR EA+K+ +ELVLLTTPTTP +RM AIVEA++GFVYLVSS+GVTG
Sbjct: 169 GLVVPDVPLEETQVLRKEAVKNGLELVLLTTPTTPTERMKAIVEAADGFVYLVSSVGVTG 228

Query: 18  ARGSVS 1
            R SVS
Sbjct: 229 TRASVS 234


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