BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008884
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   174   9e-42
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_002524432.1| transcription initiation factor ia, putative...   167   6e-40
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   149   2e-34

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  174 bits (440), Expect = 9e-42
 Identities = 94/149 (63%), Positives = 112/149 (75%), Gaps = 9/149 (6%)
 Frame = -1

Query: 422 MGVQLP-------EKEDVDYTDLELVYHVRDTLKSAQVDKSDSYHELIGVLHHTEHLTPD 264
           MGV+L        E E+V+++D ELVYHVR  L+S  +  SDSY +LIGVLHH E L PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 263 EVAMLVTSLKALSGAVNYINADHHQLLLSAISGMSLWNYGPIVMDALVELIVSLAA--GK 90
           EVA+LVTSLKALSGAV+ I+  HH+ LLS+I GMSLWNYGP VMDAL+ELI+SLAA  G 
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 89  YMDLCLAILVQNFMPPLSFLKLLQQPRGL 3
           Y+D  L +LV NFMPP S L  L+QPRGL
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGL 149


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  174 bits (440), Expect = 9e-42
 Identities = 94/149 (63%), Positives = 112/149 (75%), Gaps = 9/149 (6%)
 Frame = -1

Query: 422 MGVQLP-------EKEDVDYTDLELVYHVRDTLKSAQVDKSDSYHELIGVLHHTEHLTPD 264
           MGV+L        E E+V+++D ELVYHVR  L+S  +  SDSY +LIGVLHH E L PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 263 EVAMLVTSLKALSGAVNYINADHHQLLLSAISGMSLWNYGPIVMDALVELIVSLAA--GK 90
           EVA+LVTSLKALSGAV+ I+  HH+ LLS+I GMSLWNYGP VMDAL+ELI+SLAA  G 
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 89  YMDLCLAILVQNFMPPLSFLKLLQQPRGL 3
           Y+D  L +LV NFMPP S L  L+QPRGL
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGL 149


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
           gi|223536316|gb|EEF37967.1| transcription initiation
           factor ia, putative [Ricinus communis]
          Length = 640

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
 Frame = -1

Query: 404 EKEDVDYTDLELVYHVRDTLKSAQVDKSDSYHELIGVLHHTEHLTPDEVAMLVTSLKALS 225
           E + V+YTD +LVYHVRD L S Q   ++SY +L+GV+HH++ LTPD+VA+L+TSLKALS
Sbjct: 17  EDDGVNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRLTPDDVALLLTSLKALS 76

Query: 224 GAVNYINADHHQLLLSAISGMSLWNYGPIVMDALVELIVSLAA--GKYMDLCLAILVQNF 51
           GAV+YI+  HH  LL +I GMS+WNYGP VM+AL+ELI++LAA  GKY+D CL +LV NF
Sbjct: 77  GAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLELIIALAASNGKYIDPCLKMLVTNF 136

Query: 50  MPPLSFLKLLQQPRG 6
           +PP+  + +L+ PRG
Sbjct: 137 VPPMYLIDILKLPRG 151


>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/134 (58%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
 Frame = -1

Query: 401 KEDVDYTDLELVYHVRDTLKSAQVDKSDSYHELIGVLHHTEHLTPDEVAMLVTSLKALSG 222
           +E V  TD +LVYHVRD L S +     SYH+L+GVLHH +   PD+VA+L+TSLKALSG
Sbjct: 22  EEGVSITDWDLVYHVRDALLSVKTGDRSSYHQLVGVLHHRDRSAPDKVALLLTSLKALSG 81

Query: 221 AVNYINADHHQLLLSAISGMSLWNYGPIVMDALVELIVSLAA--GKYMDLCLAILVQNFM 48
           AV+YIN   H  LL +I GMS+WN  P VMDAL+ELI+ LAA  GKY+DLCL +LV NFM
Sbjct: 82  AVSYINDVDHVSLLQSIFGMSMWNCAPDVMDALLELIICLAASNGKYVDLCLDMLVNNFM 141

Query: 47  PPLSFLKLLQQPRG 6
           PP+    +L+ PRG
Sbjct: 142 PPME-SDMLRHPRG 154


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  149 bits (377), Expect = 2e-34
 Identities = 78/139 (56%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
 Frame = -1

Query: 413 QLPEKEDVDYTDLELVYHVRDTLKSAQVDKSDSYHELIGVLHHTEHLTPDEVAMLVTSLK 234
           QL   EDV+ TD +LV  +R  L S  +   D Y++L+GV+HH + L+PDEVA+LVT LK
Sbjct: 11  QLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLK 70

Query: 233 ALSGAVNYINADHHQLLLSAISGMSLWNYGPIVMDALVELIVSLAA--GKYMDLCLAILV 60
           ALSGAV+ I+   H+ LL+AI  MSLW+YG  VMDAL+ELI+SLA   GKY+D CL +LV
Sbjct: 71  ALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLV 130

Query: 59  QNFMPPLSFLKLLQQPRGL 3
            NFMPP S++ LL++P GL
Sbjct: 131 NNFMPPNSYMDLLKKPHGL 149