BLASTX nr result

ID: Bupleurum21_contig00008880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008880
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]    60   4e-07
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
emb|CBI26570.3| unnamed protein product [Vitis vinifera]               55   8e-06

>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
 Frame = +3

Query: 324 VNCCIDSSTLIDTNGVSNDQENLKKFSYSRASPSVRWPHLRITETQENNLLQSQFTVDDA 503
           V+ C+ S+    T   + +Q NL+KFSYSRASPSVRWPHL++TE    +  +    V+D 
Sbjct: 38  VSHCVCSAASTST---ATEQANLQKFSYSRASPSVRWPHLKLTENYPPS-QRPTHVVEDV 93

Query: 504 DLGLNHSHNS-GKIDGEKEDEDG---PVSLSDEKQEVLGR 611
            L L  +H+S GK +  +  E G    + L DE Q+ LG+
Sbjct: 94  GL-LEDTHDSLGKEEIREIGEAGFGEGLELGDETQDFLGK 132


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
 Frame = +3

Query: 312 CNMYVNCCIDSSTLIDTNGVSNDQENLKKFSYSRASPSVRWPHLRITETQENNLLQSQFT 491
           C+++ +    ++T +  N         +KFSYSRASPSVRWP L++ ET  ++  Q+QFT
Sbjct: 25  CSLHQSAPSTATTELKNNSTDCSDNAPQKFSYSRASPSVRWPQLKLNETYHSS-PQTQFT 83

Query: 492 VDDADLGLNHSHNSGKIDGEKED--EDGPVSLSDEKQE 599
               D  LNHS      +  K++  + G   LSD+  +
Sbjct: 84  EMSKDGILNHSSLDQLTEMSKDEILDVGSFELSDDDDD 121


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%)
 Frame = +3

Query: 324 VNCCIDSSTLIDTNGVSNDQENLKKFSYSRASPSVRWPHLRITETQENNLLQSQFTVDDA 503
           V+ C+ S+    T   + +Q NL+KFSYSRASPSVRWPHL++TE    +  +    V+D 
Sbjct: 38  VSHCVCSAASTST---ATEQANLQKFSYSRASPSVRWPHLKLTENYPPS-QRPTHVVEDV 93

Query: 504 DLGLNHSHNSGKIDGEKEDEDGPVSLSDEKQEV 602
           D        + +I G K +E     L D K ++
Sbjct: 94  DWRQRVQFLTDRILGLKSEEFVADVLDDRKVQM 126


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