BLASTX nr result

ID: Bupleurum21_contig00008859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008859
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...   181   2e-43
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   175   2e-41
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   163   7e-38
ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...   162   2e-37
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...   161   3e-37

>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
            gi|223543892|gb|EEF45418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 316

 Score =  181 bits (459), Expect = 2e-43
 Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 1/222 (0%)
 Frame = -3

Query: 1001 YGFGYDEHNDDYKVVGIFFCEANYASENDTYKMKVKIYSSRLDCWRNIEDFPSYILLSQW 822
            +GFGYD   DDYKVV +F  +   +S    Y+  VK+ + R +CWR    F   +    +
Sbjct: 97   FGFGYDSEIDDYKVVAVFCFQNKNSSVGFGYESIVKVCTLRTNCWRRTGSFGYGV---PY 153

Query: 821  YESGNFANEALHWAASRDKSESPESWIIVSLDLKTERYGEIAQPNYGEGTYNLELGVVER 642
              SG + N  L+W    +  +S   WIIVS D+K E Y E+ QP+YGE  Y+  LGV++ 
Sbjct: 154  DVSGKYVNCTLNWPVMSE-GDSGLMWIIVSFDIKRETYKEVMQPDYGELVYDRTLGVLDG 212

Query: 641  SLCVVCNYQNTRADVWLMKEYGVKESWTKLVSIPYFD-DETMLLGYSVPICISPSGEIWL 465
             LCV+CNY   RAD W+MKEYGV+ESW +LV++PY D   ++ L YSVP  I+ +GE+ L
Sbjct: 213  CLCVMCNYHAVRADFWVMKEYGVRESWIRLVTVPYLDYPGSLHLQYSVPYAIADNGEVLL 272

Query: 464  KIMNDIVVYNFKDNRFKDIVITNFHGCYRPEVYIESLVSPNV 339
            +  + +V+YN     FK  VI N       EVYI+SLVSP V
Sbjct: 273  EFKSSLVIYNPNYGTFKYPVINNSCSWVDAEVYIDSLVSPKV 314


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  175 bits (443), Expect = 2e-41
 Identities = 93/222 (41%), Positives = 130/222 (58%), Gaps = 1/222 (0%)
 Frame = -3

Query: 1001 YGFGYDEHNDDYKVVGIFFCEANYASENDTYKMKVKIYSSRLDCWRNIEDFPSYILLSQW 822
            +GFGYD   DDYKV+ +F            Y  ++K+ + + +CWR +EDF     L   
Sbjct: 226  FGFGYDSQIDDYKVLAMFCFLTKSVYGGSRYVTRIKVCALKGECWRRLEDFG----LGLP 281

Query: 821  YE-SGNFANEALHWAASRDKSESPESWIIVSLDLKTERYGEIAQPNYGEGTYNLELGVVE 645
            Y+ SG   +  L W    + S    +W IV+ DL  E + E+ QP+YG   Y   LGV++
Sbjct: 282  YDVSGKHVDGKLCWPVMPEGSIG-SAWSIVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQ 340

Query: 644  RSLCVVCNYQNTRADVWLMKEYGVKESWTKLVSIPYFDDETMLLGYSVPICISPSGEIWL 465
              LCV+CNYQ  RADVW++KE+GV++SWTKL SIPY DD  +   YSVP+CI   GE+ L
Sbjct: 341  GWLCVMCNYQGVRADVWVLKEFGVRDSWTKLFSIPYLDD-PLWFHYSVPLCIDVGGEVLL 399

Query: 464  KIMNDIVVYNFKDNRFKDIVITNFHGCYRPEVYIESLVSPNV 339
            +  + +V+YN K   F+  V+     C   +VYI+SLVSP V
Sbjct: 400  EYKSVLVIYNPKHGTFRYPVMNGASSCIEADVYIQSLVSPVV 441


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  163 bits (412), Expect = 7e-38
 Identities = 94/220 (42%), Positives = 127/220 (57%), Gaps = 1/220 (0%)
 Frame = -3

Query: 1001 YGFGYDEHNDDYKVVGIFFCEANYASENDTYKMKVKIYSSRLDCWRNIEDFPSYILLSQW 822
            +G GYD  N+DYKVV +F   + Y  E      KVK+YS   + WR I+DFP     S +
Sbjct: 192  FGLGYDHVNEDYKVVAVFCDPSEYFIE-----CKVKVYSMATNSWRKIQDFPHGF--SPF 244

Query: 821  YESGNFANEALHWAASRDKSESPESWIIVSLDLKTERYGEIAQPNYG-EGTYNLELGVVE 645
              SG F +  L+WAA+     S   W+IVSLDL  E Y E+  P+Y  E      LGV++
Sbjct: 245  QNSGKFVSGTLNWAANHSIGSS-SLWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQ 303

Query: 644  RSLCVVCNYQNTRADVWLMKEYGVKESWTKLVSIPYFDDETMLLGYSVPICISPSGEIWL 465
              LC+  +Y+ T   VW+MK+YG +ESW KLVSIPY  +      YS P  IS +GE+ L
Sbjct: 304  GCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPEN-FSYSGPYYISENGEVLL 362

Query: 464  KIMNDIVVYNFKDNRFKDIVITNFHGCYRPEVYIESLVSP 345
                D+++YN +DN FK   I +  G +  EVY+E+LVSP
Sbjct: 363  MFEFDLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402


>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 375

 Score =  162 bits (409), Expect = 2e-37
 Identities = 92/221 (41%), Positives = 130/221 (58%), Gaps = 2/221 (0%)
 Frame = -3

Query: 1001 YGFGYDEHNDDYKVVGIFFCEANYASEND-TYKMKVKIYSSRLDCWRNIEDFPSYILLSQ 825
            YGFGYD  ND YKVV +   E++  S     YK +VK+Y+   D WR I+DFPS +    
Sbjct: 161  YGFGYDHFNDTYKVVAVNCFESDTDSNGSKVYKTEVKVYTLGTDYWRRIQDFPSGVPFDN 220

Query: 824  WYESGNFANEALHWAASRDKSESPESWIIVSLDLKTERYGEIAQPNYGEGTYN-LELGVV 648
               SG F +  ++W A++D   S   WIIVSLDL+ E Y  + QP+YG  T N + LGV+
Sbjct: 221  ---SGTFVSGTINWLAAKDPYTS---WIIVSLDLEEETYQYLLQPDYGAVTVNSVTLGVL 274

Query: 647  ERSLCVVCNYQNTRADVWLMKEYGVKESWTKLVSIPYFDDETMLLGYSVPICISPSGEIW 468
               LC++  + +T +DVWLMKEYG  +SWTKL  +PY  D      Y+  + ++   ++ 
Sbjct: 275  RDCLCILA-HSDTFSDVWLMKEYGNNDSWTKLFRVPYMGD-VGSCPYTKALYLTEDDQVL 332

Query: 467  LKIMNDIVVYNFKDNRFKDIVITNFHGCYRPEVYIESLVSP 345
            LK   ++VVYN +D  FK   I + +    P+VY ESL+SP
Sbjct: 333  LKYQAELVVYNSRDGTFKTPEIQHINRWLVPQVYQESLISP 373


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score =  161 bits (407), Expect = 3e-37
 Identities = 94/221 (42%), Positives = 128/221 (57%)
 Frame = -3

Query: 1001 YGFGYDEHNDDYKVVGIFFCEANYASENDTYKMKVKIYSSRLDCWRNIEDFPSYILLSQW 822
            +GFGYD   D YKVV IF  E +       Y+ +VK+ +   D WR I++FPS +     
Sbjct: 187  HGFGYDRFADSYKVVAIFCYECD-----GRYETQVKVLTLGTDSWRRIQEFPSGLPFD-- 239

Query: 821  YESGNFANEALHWAASRDKSESPESWIIVSLDLKTERYGEIAQPNYGEGTYNLELGVVER 642
             ESG F +  ++W AS D S    S IIVSLDL  E Y E+ QP YG    NL LGV+  
Sbjct: 240  -ESGKFVSGTVNWLASNDSS----SLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRD 294

Query: 641  SLCVVCNYQNTRADVWLMKEYGVKESWTKLVSIPYFDDETMLLGYSVPICISPSGEIWLK 462
             LCV+ ++ +T  DVWLMK+YG KESWTKL  +PY       L Y+  +CIS   ++ ++
Sbjct: 295  CLCVL-SHADTFLDVWLMKDYGNKESWTKLFRVPYMGISDSYL-YTKALCISEDDQVLME 352

Query: 461  IMNDIVVYNFKDNRFKDIVITNFHGCYRPEVYIESLVSPNV 339
              +++ VYN ++   K   I + +    PEVYIESL+SP V
Sbjct: 353  FNSELAVYNSRNGTSKIPDIQDIYMYMTPEVYIESLISPCV 393


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