BLASTX nr result

ID: Bupleurum21_contig00008858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008858
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-37
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...   144   2e-32
ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...   137   4e-30
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   135   2e-29
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   133   6e-29

>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  160 bits (404), Expect = 5e-37
 Identities = 84/197 (42%), Positives = 122/197 (61%)
 Frame = -1

Query: 860 YNMKVEIYSLRLDCWRSIEDLPCRILRIISLGGSSNDSGHFANGALHWAASRDMNFESWD 681
           Y  ++++ +L+ +CWR +ED          LG   + SG   +G L W    + +  S  
Sbjct: 256 YVTRIKVCALKGECWRRLEDF--------GLGLPYDVSGKHVDGKLCWPVMPEGSIGS-- 305

Query: 680 SWVIVSLDLKTEKYGEVVQPNYGEGAYNLRLGVLERSLCVLCSYQNFQTDVWVMNEYGVK 501
           +W IV+ DL  E + EVVQP+YG   Y   LGVL+  LCV+C+YQ  + DVWV+ E+GV+
Sbjct: 306 AWSIVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQGWLCVMCNYQGVRADVWVLKEFGVR 365

Query: 500 ESWTKLVSIPYIEDEPTPFPYSVPLCIFANGDIVLMYKYGIVVYNSKYYRFKDTVNTKFN 321
           +SWTKL SIPY+ D+P  F YSVPLCI   G+++L YK  +V+YN K+  F+  V    +
Sbjct: 366 DSWTKLFSIPYL-DDPLWFHYSVPLCIDVGGEVLLEYKSVLVIYNPKHGTFRYPVMNGAS 424

Query: 320 NCLTPYIYIESLVSPNV 270
           +C+   +YI+SLVSP V
Sbjct: 425 SCIEADVYIQSLVSPVV 441


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score =  144 bits (364), Expect = 2e-32
 Identities = 78/198 (39%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
 Frame = -1

Query: 860 YNMKVEIYSLRLDCWRSIEDLPCRILRIISLGGSSNDSGHFANGALHWAASRDMNFESWD 681
           Y   V++ +LR +CWR               G   + SG + N  L+W    +   +S  
Sbjct: 127 YESIVKVCTLRTNCWRRTGSF--------GYGVPYDVSGKYVNCTLNWPVMSEG--DSGL 176

Query: 680 SWVIVSLDLKTEKYGEVVQPNYGEGAYNLRLGVLERSLCVLCSYQNFQTDVWVMNEYGVK 501
            W+IVS D+K E Y EV+QP+YGE  Y+  LGVL+  LCV+C+Y   + D WVM EYGV+
Sbjct: 177 MWIIVSFDIKRETYKEVMQPDYGELVYDRTLGVLDGCLCVMCNYHAVRADFWVMKEYGVR 236

Query: 500 ESWTKLVSIPYIE-DEPTPFPYSVPLCIFANGDIVLMYKYGIVVYNSKYYRFKDTVNTKF 324
           ESW +LV++PY++        YSVP  I  NG+++L +K  +V+YN  Y  FK  V    
Sbjct: 237 ESWIRLVTVPYLDYPGSLHLQYSVPYAIADNGEVLLEFKSSLVIYNPNYGTFKYPVINNS 296

Query: 323 NNCLTPYIYIESLVSPNV 270
            + +   +YI+SLVSP V
Sbjct: 297 CSWVDAEVYIDSLVSPKV 314


>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score =  137 bits (344), Expect = 4e-30
 Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 1/199 (0%)
 Frame = -1

Query: 869 NNTYNMKVEIYSLRLDCWRSIEDLPCRILRIISLGGSSNDSGHFANGALHWAASRDMNFE 690
           +  Y  +V++Y+L  D WR I+D P         G   ++SG F +G ++W A++D    
Sbjct: 189 SKVYKTEVKVYTLGTDYWRRIQDFPS--------GVPFDNSGTFVSGTINWLAAKD---- 236

Query: 689 SWDSWVIVSLDLKTEKYGEVVQPNYGEGAYN-LRLGVLERSLCVLCSYQNFQTDVWVMNE 513
            + SW+IVSLDL+ E Y  ++QP+YG    N + LGVL   LC+L     F +DVW+M E
Sbjct: 237 PYTSWIIVSLDLEEETYQYLLQPDYGAVTVNSVTLGVLRDCLCILAHSDTF-SDVWLMKE 295

Query: 512 YGVKESWTKLVSIPYIEDEPTPFPYSVPLCIFANGDIVLMYKYGIVVYNSKYYRFKDTVN 333
           YG  +SWTKL  +PY+ D  +  PY+  L +  +  ++L Y+  +VVYNS+   FK    
Sbjct: 296 YGNNDSWTKLFRVPYMGDVGS-CPYTKALYLTEDDQVLLKYQAELVVYNSRDGTFKTPEI 354

Query: 332 TKFNNCLTPYIYIESLVSP 276
              N  L P +Y ESL+SP
Sbjct: 355 QHINRWLVPQVYQESLISP 373


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  135 bits (339), Expect = 2e-29
 Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
 Frame = -1

Query: 851 KVEIYSLRLDCWRSIEDLPCRILRIISLGGSSNDSGHFANGALHWAASRDMNFESWDSWV 672
           KV++YS+  + WR I+D P   L          +SG F +G L+WAA+  +   S+  WV
Sbjct: 221 KVKVYSMATNSWRKIQDFPHGFLPF-------QNSGKFVSGTLNWAANHSIGPSSF--WV 271

Query: 671 IVSLDLKTEKYGEVVQPNYG-EGAYNLRLGVLERSLCVLCSYQNFQTDVWVMNEYGVKES 495
           IVSLDL  E Y EV+ P+Y  E      LGVL+  LC+   Y+     VW+M +YGV+ES
Sbjct: 272 IVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHFVVWMMKDYGVRES 331

Query: 494 WTKLVSIPYIEDEPTPFPYSVPLCIFANGDIVLMYKYGIVVYNSKYYRFKDTVNTKFNNC 315
           W KLVSIPY+ + P  F YS P  I  NG ++LM+++ +++Y+ +   FK          
Sbjct: 332 WVKLVSIPYVPN-PEDFSYSGPYYISENGKVLLMFEFDLILYDPRNNSFKYPKIESGKGW 390

Query: 314 LTPYIYIESLVSP 276
               +Y+E+LVSP
Sbjct: 391 FDAEVYVETLVSP 403


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  133 bits (334), Expect = 6e-29
 Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
 Frame = -1

Query: 851 KVEIYSLRLDCWRSIEDLPCRILRIISLGGSSNDSGHFANGALHWAASRDMNFESWDSWV 672
           KV++YS+  + WR I+D P              +SG F +G L+WAA+  +   S   WV
Sbjct: 220 KVKVYSMATNSWRKIQDFPHGF-------SPFQNSGKFVSGTLNWAANHSIGSSSL--WV 270

Query: 671 IVSLDLKTEKYGEVVQPNYG-EGAYNLRLGVLERSLCVLCSYQNFQTDVWVMNEYGVKES 495
           IVSLDL  E Y EV+ P+Y  E      LGVL+  LC+   Y+     VW+M +YG +ES
Sbjct: 271 IVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYKKTHFVVWMMKDYGARES 330

Query: 494 WTKLVSIPYIEDEPTPFPYSVPLCIFANGDIVLMYKYGIVVYNSKYYRFKDTVNTKFNNC 315
           W KLVSIPY+ + P  F YS P  I  NG+++LM+++ +++YN +   FK          
Sbjct: 331 WVKLVSIPYVPN-PENFSYSGPYYISENGEVLLMFEFDLILYNPRDNSFKYPKIESGKGW 389

Query: 314 LTPYIYIESLVSP 276
               +Y+E+LVSP
Sbjct: 390 FDAEVYVETLVSP 402


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