BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008852
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   141   1e-31
gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     131   2e-28
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   127   3e-27
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   127   3e-27
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   123   5e-26

>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  141 bits (356), Expect = 1e-31
 Identities = 71/124 (57%), Positives = 93/124 (75%)
 Frame = +1

Query: 184 SRLEARSEELDMHLVIEVNTEIYPIRVGDRFRTVLSKTLYPDGSAVTDYNPEDKQKSLAD 363
           SR+EARSE+L MH++++VNTEIYPI  G++   VLS TL  DGS VT Y  ++ +KSLAD
Sbjct: 26  SRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLAD 85

Query: 364 KFEYVMHGLLYKMSEDTSTDKSGRDLPVEVYISFGGLQMKLTGEAIKMGKYKVDEKLFLL 543
           KFEY+MHG  YK+S+    + SG DL VEVY SFGGLQM L G+ I   K++VD+ +FLL
Sbjct: 86  KFEYIMHGKTYKLSD----EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLL 141

Query: 544 MRRL 555
           +R+L
Sbjct: 142 LRKL 145


>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  131 bits (329), Expect = 2e-28
 Identities = 65/124 (52%), Positives = 93/124 (75%)
 Frame = +1

Query: 184 SRLEARSEELDMHLVIEVNTEIYPIRVGDRFRTVLSKTLYPDGSAVTDYNPEDKQKSLAD 363
           SR+EARSE+ DM++ ++VNTEIYP+ VGD+F  VL+ TL  DG+  + Y  + ++KSLAD
Sbjct: 26  SRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVLAPTLSLDGTPDSGYYMQGQRKSLAD 85

Query: 364 KFEYVMHGLLYKMSEDTSTDKSGRDLPVEVYISFGGLQMKLTGEAIKMGKYKVDEKLFLL 543
           KFEYVMHG LYK+SE++    SG ++ VE+Y SFGGL M L G+      +++D++LFLL
Sbjct: 86  KFEYVMHGKLYKISEES----SGPNVKVEIYASFGGLLMMLKGDPSNATNFELDQRLFLL 141

Query: 544 MRRL 555
           MR++
Sbjct: 142 MRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/124 (50%), Positives = 91/124 (73%)
 Frame = +1

Query: 184 SRLEARSEELDMHLVIEVNTEIYPIRVGDRFRTVLSKTLYPDGSAVTDYNPEDKQKSLAD 363
           SR+EARSE+ DM++ ++V TE+YP+R GDRF  VL+ TL  DG+  T +  +  +K+LAD
Sbjct: 276 SRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLAD 335

Query: 364 KFEYVMHGLLYKMSEDTSTDKSGRDLPVEVYISFGGLQMKLTGEAIKMGKYKVDEKLFLL 543
           KF+YVMHG LYK+SED+S   SG+   VE+Y SFGGL M L G+      +++D++LFLL
Sbjct: 336 KFDYVMHGKLYKISEDSS---SGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLL 392

Query: 544 MRRL 555
           +R++
Sbjct: 393 IRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/124 (50%), Positives = 91/124 (73%)
 Frame = +1

Query: 184 SRLEARSEELDMHLVIEVNTEIYPIRVGDRFRTVLSKTLYPDGSAVTDYNPEDKQKSLAD 363
           SR+EARSE+ DM++ ++V TE+YP+R GDRF  VL+ TL  DG+  T +  +  +K+LAD
Sbjct: 71  SRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLAD 130

Query: 364 KFEYVMHGLLYKMSEDTSTDKSGRDLPVEVYISFGGLQMKLTGEAIKMGKYKVDEKLFLL 543
           KF+YVMHG LYK+SED+S   SG+   VE+Y SFGGL M L G+      +++D++LFLL
Sbjct: 131 KFDYVMHGKLYKISEDSS---SGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLL 187

Query: 544 MRRL 555
           +R++
Sbjct: 188 IRKV 191


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  123 bits (308), Expect = 5e-26
 Identities = 61/124 (49%), Positives = 91/124 (73%)
 Frame = +1

Query: 184 SRLEARSEELDMHLVIEVNTEIYPIRVGDRFRTVLSKTLYPDGSAVTDYNPEDKQKSLAD 363
           SR+EA SE+ DM + ++VN E YPI+ G++FR VL+ TL+ DG+ VTDY  + +QKSLAD
Sbjct: 26  SRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLHLDGADVTDYFTQGEQKSLAD 85

Query: 364 KFEYVMHGLLYKMSEDTSTDKSGRDLPVEVYISFGGLQMKLTGEAIKMGKYKVDEKLFLL 543
           KF+YVM+G++YK+    S + SG D+   +Y SFGGL M L G+   + K +V+++LFLL
Sbjct: 86  KFDYVMYGIIYKV----SNEGSGPDVKGVIYASFGGLLMILKGDPSNLNKLEVNKRLFLL 141

Query: 544 MRRL 555
           M+++
Sbjct: 142 MKKV 145