BLASTX nr result

ID: Bupleurum21_contig00008833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008833
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   144   7e-33
ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   144   1e-32
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   140   8e-32
emb|CBI40505.3| unnamed protein product [Vitis vinifera]              140   8e-32
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]   140   8e-32

>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 703

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/89 (77%), Positives = 81/89 (91%)
 Frame = -3

Query: 268 GADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILKGKDVLAKARTGTGKT 89
           G+DSYLSETRFDQCSIS  SL+ + DAGY+KMT+VQEATLP+ILKGKDVLAKA+TGTGKT
Sbjct: 226 GSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKT 285

Query: 88  VAFLLPSIEVISKTPHTDRDQKWPPILVL 2
           VAFLLPSIEV++K+P +DRD + PPI VL
Sbjct: 286 VAFLLPSIEVVAKSPPSDRDHRRPPIAVL 314


>ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 806

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/89 (77%), Positives = 81/89 (91%)
 Frame = -3

Query: 268 GADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILKGKDVLAKARTGTGKT 89
           G+DSYLSETRFDQCSIS  SL+ + DAGY+KMT+VQEATLP+ILKGKDVLAKA+TGTGKT
Sbjct: 329 GSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKT 388

Query: 88  VAFLLPSIEVISKTPHTDRDQKWPPILVL 2
           VAFLLPSIEV++K+P +DRD + PPI VL
Sbjct: 389 VAFLLPSIEVVAKSPPSDRDHRRPPISVL 417


>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
           vinifera]
          Length = 751

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = -3

Query: 265 ADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILKGKDVLAKARTGTGKTV 86
           +DSYLSETRFDQC IS  SL+AI DAGY+KMT+VQEATLP+ILKGKDVLAKA+TGTGKTV
Sbjct: 276 SDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTV 335

Query: 85  AFLLPSIEVISKTPHTDRDQKWPPILVL 2
           AFLLPSIE++ K+P   RDQK PPI+VL
Sbjct: 336 AFLLPSIEILVKSPPISRDQKRPPIVVL 363


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = -3

Query: 265 ADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILKGKDVLAKARTGTGKTV 86
           +DSYLSETRFDQC IS  SL+AI DAGY+KMT+VQEATLP+ILKGKDVLAKA+TGTGKTV
Sbjct: 257 SDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTV 316

Query: 85  AFLLPSIEVISKTPHTDRDQKWPPILVL 2
           AFLLPSIE++ K+P   RDQK PPI+VL
Sbjct: 317 AFLLPSIEILVKSPPISRDQKRPPIVVL 344


>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = -3

Query: 265 ADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILKGKDVLAKARTGTGKTV 86
           +DSYLSETRFDQC IS  SL+AI DAGY+KMT+VQEATLP+ILKGKDVLAKA+TGTGKTV
Sbjct: 388 SDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTV 447

Query: 85  AFLLPSIEVISKTPHTDRDQKWPPILVL 2
           AFLLPSIE++ K+P   RDQK PPI+VL
Sbjct: 448 AFLLPSIEILVKSPPISRDQKRPPIVVL 475


Top