BLASTX nr result

ID: Bupleurum21_contig00008831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008831
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34744.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...   369   e-100
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   369   e-100
ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   357   3e-96
ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   354   2e-95

>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  369 bits (947), Expect = e-100
 Identities = 170/247 (68%), Positives = 201/247 (81%)
 Frame = +3

Query: 3   VLSYLDPPEICQLARLNRAFHGASSSDFIWDAKLPSNYNYFVHRFLDLGSQHLLKKDIFS 182
           VLSYLDPPEIC+LA+LNRAF GAS +D +W+ KLPSNY   + +      ++L KK+I++
Sbjct: 32  VLSYLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYA 91

Query: 183 RLSKPISFDGGTKQIWVDKRTGGVCLSISAKGLSITGIDDRRYWKHIPTDESRFHMVAYL 362
           RL +P  FDGGTK+ W+DKRTGGVCLSIS+KGL+ITGIDDRRYW +IPT+ESRF+ VAY+
Sbjct: 92  RLCQPNPFDGGTKKAWLDKRTGGVCLSISSKGLAITGIDDRRYWTYIPTEESRFNTVAYV 151

Query: 363 QQIWWLEVDGNIDFEFPVGSYSLLFRLQLGRVTKRLGRRICNSECIHGWNIKPVRFELKT 542
           QQIWWLEVDG +DF FP G+YS+ FRLQLGR +KRLGRRICN E +HGW+IKPVRF+L T
Sbjct: 152 QQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWDIKPVRFQLWT 211

Query: 543 HDGQHAESQCFLDNLGNWEYYHGGDFVVDKANNSTNIKFSLTQIDCTHTKGGLCVDSVLI 722
            DGQHA SQCFLD  G W  YH  DFVVD +N  T IKFS+TQIDCTHTKGGLCVDSVLI
Sbjct: 212 SDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGLCVDSVLI 271

Query: 723 CPSGLRK 743
            P   R+
Sbjct: 272 YPREFRE 278


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
           gi|222860863|gb|EEE98405.1| f-box family protein
           [Populus trichocarpa]
          Length = 294

 Score =  369 bits (947), Expect = e-100
 Identities = 166/246 (67%), Positives = 201/246 (81%), Gaps = 1/246 (0%)
 Frame = +3

Query: 3   VLSYLDPPEICQLARLNRAFHGASSSDFIWDAKLPSNYNYFVHRFLDLGSQ-HLLKKDIF 179
           VL +LDPP+IC+LARLNRAFHGASS+DFIW++KLPSNY +   + LD  +   L KKD++
Sbjct: 35  VLMHLDPPDICKLARLNRAFHGASSADFIWESKLPSNYKFICEKVLDEKTVVGLEKKDVY 94

Query: 180 SRLSKPISFDGGTKQIWVDKRTGGVCLSISAKGLSITGIDDRRYWKHIPTDESRFHMVAY 359
           +R+ +P  FDGGTK++W+DK+TGG C SIS+KGL+ITGIDDRRYW HI T+ESRFH VAY
Sbjct: 95  ARMCRPNPFDGGTKEVWLDKKTGGACFSISSKGLAITGIDDRRYWNHISTEESRFHTVAY 154

Query: 360 LQQIWWLEVDGNIDFEFPVGSYSLLFRLQLGRVTKRLGRRICNSECIHGWNIKPVRFELK 539
           LQQIWW E+DG  +FEFP G YSL FRLQLGR +KR+GRR+CNSE IHGW+IKPVRF+L 
Sbjct: 155 LQQIWWFEIDGEFEFEFPKGMYSLFFRLQLGRSSKRMGRRVCNSEHIHGWDIKPVRFQLT 214

Query: 540 THDGQHAESQCFLDNLGNWEYYHGGDFVVDKANNSTNIKFSLTQIDCTHTKGGLCVDSVL 719
           T DGQ A S+CFLD  GNW YYH GDFVVD+ +    IKFS+TQIDCTHTKGGLCVD+  
Sbjct: 215 TSDGQRAASKCFLDTPGNWVYYHAGDFVVDRPSELMKIKFSMTQIDCTHTKGGLCVDAAF 274

Query: 720 ICPSGL 737
           + PS +
Sbjct: 275 VYPSSI 280


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  369 bits (947), Expect = e-100
 Identities = 170/247 (68%), Positives = 201/247 (81%)
 Frame = +3

Query: 3   VLSYLDPPEICQLARLNRAFHGASSSDFIWDAKLPSNYNYFVHRFLDLGSQHLLKKDIFS 182
           VLSYLDPPEIC+LA+LNRAF GAS +D +W+ KLPSNY   + +      ++L KK+I++
Sbjct: 32  VLSYLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYA 91

Query: 183 RLSKPISFDGGTKQIWVDKRTGGVCLSISAKGLSITGIDDRRYWKHIPTDESRFHMVAYL 362
           RL +P  FDGGTK+ W+DKRTGGVCLSIS+KGL+ITGIDDRRYW +IPT+ESRF+ VAY+
Sbjct: 92  RLCQPNPFDGGTKKAWLDKRTGGVCLSISSKGLAITGIDDRRYWTYIPTEESRFNTVAYV 151

Query: 363 QQIWWLEVDGNIDFEFPVGSYSLLFRLQLGRVTKRLGRRICNSECIHGWNIKPVRFELKT 542
           QQIWWLEVDG +DF FP G+YS+ FRLQLGR +KRLGRRICN E +HGW+IKPVRF+L T
Sbjct: 152 QQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWDIKPVRFQLWT 211

Query: 543 HDGQHAESQCFLDNLGNWEYYHGGDFVVDKANNSTNIKFSLTQIDCTHTKGGLCVDSVLI 722
            DGQHA SQCFLD  G W  YH  DFVVD +N  T IKFS+TQIDCTHTKGGLCVDSVLI
Sbjct: 212 SDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGLCVDSVLI 271

Query: 723 CPSGLRK 743
            P   R+
Sbjct: 272 YPREFRE 278


>ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
           gi|296089069|emb|CBI38772.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  357 bits (916), Expect = 3e-96
 Identities = 163/249 (65%), Positives = 199/249 (79%), Gaps = 2/249 (0%)
 Frame = +3

Query: 3   VLSYLDPPEICQLARLNRAFHGASSSDFIWDAKLPSNYNYFVH--RFLDLGSQHLLKKDI 176
           VL  LDPPEIC+LARLNRAF GAS++DFIW+AKLP NY   +   +  D  S +L KK I
Sbjct: 35  VLMNLDPPEICKLARLNRAFRGASAADFIWEAKLPPNYRSLIQELKIFDEFSMNLRKKGI 94

Query: 177 FSRLSKPISFDGGTKQIWVDKRTGGVCLSISAKGLSITGIDDRRYWKHIPTDESRFHMVA 356
           ++RL +P  FDGGTK++W+DKRTGGVC SIS+K L+ITGIDDRRYW HIPT+ESRF  VA
Sbjct: 95  YARLCRPNPFDGGTKEVWLDKRTGGVCFSISSKALTITGIDDRRYWNHIPTEESRFQTVA 154

Query: 357 YLQQIWWLEVDGNIDFEFPVGSYSLLFRLQLGRVTKRLGRRICNSECIHGWNIKPVRFEL 536
           YLQQ WW EVDG  +F FP G+YSL FRL LGR +KRLGRR+CN E IHGW+IKPV+F+L
Sbjct: 155 YLQQTWWFEVDGEFEFRFPPGTYSLFFRLHLGRASKRLGRRVCNPEHIHGWDIKPVKFQL 214

Query: 537 KTHDGQHAESQCFLDNLGNWEYYHGGDFVVDKANNSTNIKFSLTQIDCTHTKGGLCVDSV 716
            T +GQHA S+C+L+N GNW ++H GDFVV++ + +  +KFS TQIDCTHTKGG+CVDSV
Sbjct: 215 TTSEGQHAVSKCYLENPGNWIHHHVGDFVVEQGDTAMKVKFSATQIDCTHTKGGVCVDSV 274

Query: 717 LICPSGLRK 743
           LICP  + K
Sbjct: 275 LICPWSIGK 283


>ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score =  354 bits (908), Expect = 2e-95
 Identities = 164/248 (66%), Positives = 200/248 (80%), Gaps = 1/248 (0%)
 Frame = +3

Query: 3   VLSYLDPPEICQLARLNRAFHGASSSDFIWDAKLPSNYNYFVHRFL-DLGSQHLLKKDIF 179
           VL YLDPP+IC+LARLNRAF  AS +DFIW++KLPSNY + V + L D   + L K+DI+
Sbjct: 32  VLMYLDPPDICKLARLNRAFRDASVADFIWESKLPSNYKFIVEKALKDASVEELGKRDIY 91

Query: 180 SRLSKPISFDGGTKQIWVDKRTGGVCLSISAKGLSITGIDDRRYWKHIPTDESRFHMVAY 359
           +RL +P SFD GTK+IW+DKRTGGVCL+IS++ L ITGIDDRRYW  I T+ESRFH VAY
Sbjct: 92  ARLCRPNSFDNGTKEIWLDKRTGGVCLAISSQALRITGIDDRRYWSRISTEESRFHTVAY 151

Query: 360 LQQIWWLEVDGNIDFEFPVGSYSLLFRLQLGRVTKRLGRRICNSECIHGWNIKPVRFELK 539
           LQQIWWLEV+G++DF+FP GSY++ FRLQLGR +KRLGRR+C ++ +HGW+IKPV+F+L 
Sbjct: 152 LQQIWWLEVEGDVDFQFPPGSYNVFFRLQLGRSSKRLGRRVCKTDDVHGWDIKPVKFQLT 211

Query: 540 THDGQHAESQCFLDNLGNWEYYHGGDFVVDKANNSTNIKFSLTQIDCTHTKGGLCVDSVL 719
           T DGQHA SQ  LDN GNW  YH G+FV    N+   IK SLTQIDCTHTKGGLCVDSV 
Sbjct: 212 TSDGQHAVSQSHLDNPGNWILYHAGNFVSKNPNDLMKIKISLTQIDCTHTKGGLCVDSVF 271

Query: 720 ICPSGLRK 743
           IC S ++K
Sbjct: 272 ICNSDVKK 279


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