BLASTX nr result

ID: Bupleurum21_contig00008817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008817
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264...   240   3e-61
emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]   239   6e-61
ref|XP_002532732.1| RNA binding protein, putative [Ricinus commu...   229   5e-58
ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [...   217   2e-54
ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [...   215   7e-54

>ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264206 [Vitis vinifera]
           gi|296084617|emb|CBI25667.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  240 bits (612), Expect = 3e-61
 Identities = 134/218 (61%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
 Frame = -3

Query: 769 NVEVQAPTENGVTVEIEDEEPVAEVINVVPDSAQLVVETNAKTEDTPKKSYASIVKDLKG 590
           N EV  P+ENG     E+E PVAEV++ + D  Q+V  +++K  + PKKSYASIVK +K 
Sbjct: 179 NEEVYNPSENGEASVEEEEAPVAEVVDEIQDD-QMVTISDSKILEVPKKSYASIVKVMKE 237

Query: 589 NSLPFSSPVPAPRKTPPKSQEQQVKPALPIASYAEGTGSTSHAPEIGKSQDGEAEGYSIY 410
           +S+PFSSP P P +  PK QEQQV  A P+ +     G+ ++A E G +Q+GEA+G+SIY
Sbjct: 238 SSVPFSSPTPIPPRPVPKIQEQQVTVA-PLPT----PGAEANAIENGNNQEGEADGHSIY 292

Query: 409 IKGLPYDATPALLEDEFKKYGTIKNGGIQVRS-KQGFCFGFVEFEEASAVQKAIEASPIT 233
           I+GLP +ATPALLEDEFKK+G IK+GG+QVRS KQGFCFGFVEFE ASAVQ A+EASPIT
Sbjct: 293 IRGLPSNATPALLEDEFKKFGPIKSGGVQVRSNKQGFCFGFVEFEVASAVQSAMEASPIT 352

Query: 232 LGGRPAVVEEKKSTN-SRGNNRGRFPAGRGVGFRNEAG 122
           +GGR A VEEK+STN SR NNR RF  GRGV FRNE G
Sbjct: 353 IGGRQAFVEEKRSTNSSRVNNRTRFSNGRGVVFRNEGG 390


>emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]
          Length = 524

 Score =  239 bits (609), Expect = 6e-61
 Identities = 133/217 (61%), Positives = 163/217 (75%), Gaps = 1/217 (0%)
 Frame = -3

Query: 769 NVEVQAPTENGVTVEIEDEEPVAEVINVVPDSAQLVVETNAKTEDTPKKSYASIVKDLKG 590
           N EV  P+ENG     E+E PVAEV++ + D  Q+V  +++K  + PKKSYASIVK +K 
Sbjct: 212 NEEVYNPSENGEASVEEEEAPVAEVVDEIQDD-QMVTISDSKILEVPKKSYASIVKVMKE 270

Query: 589 NSLPFSSPVPAPRKTPPKSQEQQVKPALPIASYAEGTGSTSHAPEIGKSQDGEAEGYSIY 410
           +S+PFSSP P P +  PK QEQQV  A P+ +     G+ ++A E G +QDGEA+G+SIY
Sbjct: 271 SSVPFSSPTPXPXRPVPKIQEQQVTVA-PLPT----PGAEANAIENGNNQDGEADGHSIY 325

Query: 409 IKGLPYDATPALLEDEFKKYGTIKNGGIQVRS-KQGFCFGFVEFEEASAVQKAIEASPIT 233
           I+GLP +ATPALLEDEFKK+G IK+GG+QVRS KQGFCFGFVEFE ASAVQ A+EASPIT
Sbjct: 326 IRGLPSNATPALLEDEFKKFGPIKSGGVQVRSNKQGFCFGFVEFEVASAVQSAMEASPIT 385

Query: 232 LGGRPAVVEEKKSTNSRGNNRGRFPAGRGVGFRNEAG 122
           +GGR A VEEK+STN   NNR RF  GRGV FRNE G
Sbjct: 386 IGGRQAFVEEKRSTNM--NNRTRFSNGRGVVFRNEGG 420


>ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
           gi|223527509|gb|EEF29634.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 478

 Score =  229 bits (584), Expect = 5e-58
 Identities = 126/218 (57%), Positives = 162/218 (74%), Gaps = 6/218 (2%)
 Frame = -3

Query: 763 EVQAPTEN-GVTVEIEDEEPVAEVINVVPD-----SAQLVVETNAKTEDTPKKSYASIVK 602
           EV  P+EN  V++E EDE PV EV++ VP+      +Q+  E+ +K E+ PKKSYASIVK
Sbjct: 185 EVCDPSENEDVSIE-EDETPVPEVVDEVPEVLEMADSQIAAESISKVEELPKKSYASIVK 243

Query: 601 DLKGNSLPFSSPVPAPRKTPPKSQEQQVKPALPIASYAEGTGSTSHAPEIGKSQDGEAEG 422
            +K N +PFSSP P+P ++ PKSQEQ      P+ + +E   STS+A E   +Q+ EA+G
Sbjct: 244 VMKENVVPFSSPAPSPIRSAPKSQEQVTAAVTPVVT-SETHVSTSNATENANAQESEADG 302

Query: 421 YSIYIKGLPYDATPALLEDEFKKYGTIKNGGIQVRSKQGFCFGFVEFEEASAVQKAIEAS 242
            SIY+KGLP DATP+LLE+EFKK+G+I+ GGIQVR ++GFCFGFVEFE ASAVQ AIEAS
Sbjct: 303 PSIYVKGLPLDATPSLLENEFKKFGSIRAGGIQVRCQKGFCFGFVEFEVASAVQSAIEAS 362

Query: 241 PITLGGRPAVVEEKKSTNSRGNNRGRFPAGRGVGFRNE 128
           PI + G   VVEEK+ST SRGN+RGRF +G G G+RNE
Sbjct: 363 PIMIHGCRVVVEEKRST-SRGNHRGRFSSGAGAGYRNE 399


>ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 466

 Score =  217 bits (553), Expect = 2e-54
 Identities = 119/212 (56%), Positives = 149/212 (70%)
 Frame = -3

Query: 763 EVQAPTENGVTVEIEDEEPVAEVINVVPDSAQLVVETNAKTEDTPKKSYASIVKDLKGNS 584
           EV  P ENG     E+E PV EV++ +PD +Q+V    ++ E+ PKKSYA IVK +K  +
Sbjct: 180 EVYNP-ENGQAAIEEEEAPVPEVLDEIPDDSQMVAGLASQIEEVPKKSYAYIVKVMKEGA 238

Query: 583 LPFSSPVPAPRKTPPKSQEQQVKPALPIASYAEGTGSTSHAPEIGKSQDGEAEGYSIYIK 404
            P S+  P   K+  KSQEQQ   A P +S +E  GS  +  E+G +Q+ EAEGYSIY+K
Sbjct: 239 APSSTVTPVSVKSAHKSQEQQGIAAPPPSSISETNGSIINTNEVGNNQETEAEGYSIYVK 298

Query: 403 GLPYDATPALLEDEFKKYGTIKNGGIQVRSKQGFCFGFVEFEEASAVQKAIEASPITLGG 224
           GLP  ATPA+LE+EFKK+G IK+GGIQVRS++GF FGFVEFE ASAVQ A+EASPI + G
Sbjct: 299 GLPPTATPAVLENEFKKFGPIKSGGIQVRSQKGFSFGFVEFEVASAVQSALEASPILING 358

Query: 223 RPAVVEEKKSTNSRGNNRGRFPAGRGVGFRNE 128
           R  VVEEK+STN RG  RGRF +GR   FR E
Sbjct: 359 RQVVVEEKRSTN-RGKCRGRFSSGRAPSFRGE 389


>ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 462

 Score =  215 bits (548), Expect = 7e-54
 Identities = 115/212 (54%), Positives = 147/212 (69%)
 Frame = -3

Query: 763 EVQAPTENGVTVEIEDEEPVAEVINVVPDSAQLVVETNAKTEDTPKKSYASIVKDLKGNS 584
           EV    ENG     E+E PV EV++ +PD +Q+V    ++ E+ PKKSYA IVK +K  +
Sbjct: 180 EVVYNPENGQAAIEEEEAPVPEVLDEIPDDSQMVAGLASQIEEVPKKSYAYIVKVMKEGA 239

Query: 583 LPFSSPVPAPRKTPPKSQEQQVKPALPIASYAEGTGSTSHAPEIGKSQDGEAEGYSIYIK 404
           +P S+  P P K+  KSQEQQ   A P +S +E  GS  +  E+G  Q+ EAEGYSIY+K
Sbjct: 240 MPSSTVTPVPVKSAHKSQEQQGIAAPPPSSISETNGSVINTNEVGNIQEAEAEGYSIYVK 299

Query: 403 GLPYDATPALLEDEFKKYGTIKNGGIQVRSKQGFCFGFVEFEEASAVQKAIEASPITLGG 224
           GLP  ATPA+LE+EFKK+G IK+GGIQVRS++GF +GFVEFE ASA Q A+EASPI++ G
Sbjct: 300 GLPPTATPAVLENEFKKFGPIKSGGIQVRSQKGFSYGFVEFEVASAAQSALEASPISING 359

Query: 223 RPAVVEEKKSTNSRGNNRGRFPAGRGVGFRNE 128
           R  VVEEK+STN     RGRF +GR   FR E
Sbjct: 360 RLVVVEEKRSTN---RGRGRFSSGRAPSFRGE 388


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