BLASTX nr result

ID: Bupleurum21_contig00008804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008804
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306434.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_003631533.1| PREDICTED: uncharacterized protein LOC100854...    72   6e-11
emb|CAN64708.1| hypothetical protein VITISV_043723 [Vitis vinifera]    67   1e-09
ref|XP_002272793.2| PREDICTED: uncharacterized protein LOC100240...    67   2e-09
emb|CBI40734.3| unnamed protein product [Vitis vinifera]               67   2e-09

>ref|XP_002306434.1| predicted protein [Populus trichocarpa] gi|222855883|gb|EEE93430.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/99 (46%), Positives = 60/99 (60%)
 Frame = -1

Query: 303 VGAKDLKMSTSLGNGFASDPNFGDVFSATSVQVKQNSPVPAASTSGLPVSSAIVPANPGS 124
           +  +D K     GNGFASD  FGDVFSAT  Q KQ+S   A STS +PVSSAIV ++ GS
Sbjct: 266 LATRDSKSVVVSGNGFASDSLFGDVFSATPAQPKQSSSSSAHSTSSIPVSSAIVSSSVGS 325

Query: 123 QNTARPSALGPMQSAPPQLPAGSQNQHLPTTMKANQPIS 7
           Q + +PS+L  +QS  PQ   G Q+   P     +Q ++
Sbjct: 326 QPSVKPSSLDSLQSTFPQQHVGGQSTARPNQQVPSQSVT 364


>ref|XP_003631533.1| PREDICTED: uncharacterized protein LOC100854676 [Vitis vinifera]
          Length = 1089

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = -1

Query: 297 AKDLKMSTSLGNGFASDPNFG-DVFSATSVQVKQNSPVPAASTSGLPVSSAIVPANPGSQ 121
           AK+ K     GNGFAS+  FG DVFSA+  Q+KQ+S V  +S+   P+SS+I P + G+ 
Sbjct: 269 AKNSKAMDVTGNGFASESIFGGDVFSASPSQLKQDSSVHTSSSGNAPISSSIAPVSSGAL 328

Query: 120 NTARPSALGPMQSAPPQLPAGSQNQHLPTTMKANQPISVQ 1
            + +  AL  +QS+P   P G Q Q      K NQ +  Q
Sbjct: 329 PSVKSRALDSLQSSPMIQPVGGQLQQAQPLSKQNQQVPTQ 368


>emb|CAN64708.1| hypothetical protein VITISV_043723 [Vitis vinifera]
          Length = 1120

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -1

Query: 297 AKDLKMSTSLGNGFASDPNFG-DVFSATSVQVKQNSPVPAASTSGLPVSSAIVPANPGSQ 121
           AK+ K     GNGFAS+  FG DVFSA+  Q+KQ+S V  +S+   P+SS+I P + G+ 
Sbjct: 286 AKNSKALDVTGNGFASESIFGGDVFSASPSQLKQDSSVHTSSSGNAPISSSIAPVSSGAL 345

Query: 120 NTARPSALGPMQSAPPQLPAGSQNQHLPTTMKANQPISVQ 1
            + +   L   QS P   P G Q Q      K NQ +  Q
Sbjct: 346 PSVKSRXLDSPQSLPMIQPVGGQLQQAQPLSKQNQQVPTQ 385


>ref|XP_002272793.2| PREDICTED: uncharacterized protein LOC100240982 [Vitis vinifera]
          Length = 984

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 GNGFASDPNFG-DVFSATSVQVKQNSPVPAASTSGLPVSS-AIVPANPGSQNTARPSALG 94
           GNGFASDP FG +VFSAT  Q K++S     S S  P SS A+ PA  GS + ++PS+L 
Sbjct: 242 GNGFASDPVFGGNVFSATPTQQKRDSSGLTYSVSSSPASSVALSPAPTGSPSLSKPSSLD 301

Query: 93  PMQSAPPQLPAGSQNQHLPTTMKANQPISVQ 1
            +QSA    PAG Q Q   +    NQP   Q
Sbjct: 302 SLQSAFTMGPAGGQIQRAQSAGNLNQPAPPQ 332


>emb|CBI40734.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 GNGFASDPNFG-DVFSATSVQVKQNSPVPAASTSGLPVSS-AIVPANPGSQNTARPSALG 94
           GNGFASDP FG +VFSAT  Q K++S     S S  P SS A+ PA  GS + ++PS+L 
Sbjct: 242 GNGFASDPVFGGNVFSATPTQQKRDSSGLTYSVSSSPASSVALSPAPTGSPSLSKPSSLD 301

Query: 93  PMQSAPPQLPAGSQNQHLPTTMKANQPISVQ 1
            +QSA    PAG Q Q   +    NQP   Q
Sbjct: 302 SLQSAFTMGPAGGQIQRAQSAGNLNQPAPPQ 332


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