BLASTX nr result

ID: Bupleurum21_contig00008796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008796
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    70   2e-10
ref|XP_003630658.1| F-box/LRR-repeat protein [Medicago truncatul...    68   7e-10

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = -1

Query: 437 QMKSLKQITLYLVLGDIDKALSFILYIVGICTHLSDIVLFIHRDVNLSAAISFVSRCTSQ 258
           +MK LK++ + LV+ DID  LSFI  I+  CT+LSD+ L IH +V+ + A S +SRC + 
Sbjct: 373 EMKELKEVIVQLVIQDIDVTLSFIFTILDKCTNLSDVGLLIHCEVDPNVASSLLSRCKAD 432

Query: 257 CPKVRLRWGIWKEGTKDCCISNCI 186
            P++R RWG+WKEG+K   IS+ I
Sbjct: 433 HPRIRWRWGMWKEGSKGTWISDGI 456


>ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Glycine max]
          Length = 453

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/83 (40%), Positives = 54/83 (65%)
 Frame = -1

Query: 434 MKSLKQITLYLVLGDIDKALSFILYIVGICTHLSDIVLFIHRDVNLSAAISFVSRCTSQC 255
           MK +K++  +L++ ++   L+FI  ++   T LSD+ L I+R+V+   A S +S C S+ 
Sbjct: 371 MKMIKELIAHLMVHEMGVTLAFISSVLDKSTELSDVSLLINRNVDSYVAGSLISACRSKF 430

Query: 254 PKVRLRWGIWKEGTKDCCISNCI 186
           P+VR RWGIW+EG KD   S+ I
Sbjct: 431 PRVRWRWGIWEEGIKDTWFSDGI 453


>ref|XP_003630658.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355524680|gb|AET05134.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 370

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/84 (39%), Positives = 52/84 (61%)
 Frame = -1

Query: 437 QMKSLKQITLYLVLGDIDKALSFILYIVGICTHLSDIVLFIHRDVNLSAAISFVSRCTSQ 258
           +MK+LK++  ++V+ +I+   +FI  ++  C  L D+ LFIH   +   A + +S C S+
Sbjct: 287 RMKTLKELVAHIVVVEIEFTHAFIFSVLDKCNLLGDVSLFIHGHADSCVAGNLISVCRSK 346

Query: 257 CPKVRLRWGIWKEGTKDCCISNCI 186
              VR RWGIWKEG KD  +S+ I
Sbjct: 347 FTGVRWRWGIWKEGIKDTLVSDGI 370


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