BLASTX nr result

ID: Bupleurum21_contig00008789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008789
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90278.1| nucleotide-binding site leucine-rich repeat prote...    88   6e-16
gb|AFC90319.1| nucleotide-binding site leucine-rich repeat prote...    86   3e-15
gb|AFC90296.1| nucleotide-binding site leucine-rich repeat prote...    86   4e-15
gb|AFC90295.1| nucleotide-binding site leucine-rich repeat prote...    86   4e-15
gb|AFC90243.1| nucleotide-binding site leucine-rich repeat prote...    85   7e-15

>gb|AFC90278.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 295

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/93 (44%), Positives = 63/93 (67%)
 Frame = +3

Query: 30  ITALTDDEAWDMFKDSVGTHKIESLQDESLAKQVCNKCRGLPLLIRAVGKALRNMSGNVW 209
           I  L+++EAW++FK  +G + +   Q  ++AK VC +CRGLP+ I AVG AL+  S + W
Sbjct: 124 IQVLSEEEAWNLFKKKMGNNVVSHDQLHTIAKAVCRECRGLPVAILAVGAALKGKSISAW 183

Query: 210 KDALDQLQKYKIECIPGIDPEVYACLKLSFDNL 308
           K +LD+LQK  +  I  IDP+++  L+LS+D L
Sbjct: 184 KSSLDKLQKSMLNKIEDIDPKLFTSLRLSYDYL 216


>gb|AFC90319.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron rubropunctatum]
          Length = 268

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 61/93 (65%)
 Frame = +3

Query: 30  ITALTDDEAWDMFKDSVGTHKIESLQDESLAKQVCNKCRGLPLLIRAVGKALRNMSGNVW 209
           I  L+++EAW++FK  +G +     Q   +AK VC +CRGLP+ I AVG AL+  S + W
Sbjct: 112 IQVLSEEEAWNLFKKKMGNNVDSHDQLHDIAKAVCRECRGLPVAILAVGAALKGKSMSAW 171

Query: 210 KDALDQLQKYKIECIPGIDPEVYACLKLSFDNL 308
           K +LD+LQK  +  I  IDP+++  L+LS+D L
Sbjct: 172 KSSLDKLQKSMLNKIEDIDPKLFTSLRLSYDYL 204


>gb|AFC90296.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron oldhamii]
          Length = 261

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/93 (43%), Positives = 62/93 (66%)
 Frame = +3

Query: 30  ITALTDDEAWDMFKDSVGTHKIESLQDESLAKQVCNKCRGLPLLIRAVGKALRNMSGNVW 209
           I  L+++EAWD+FK  +G +     Q   +AK VC +CRGLP+ I AVG AL++ S + W
Sbjct: 105 IQVLSEEEAWDLFKKKMGNNVESHDQLHHIAKAVCRECRGLPVAILAVGAALKDKSMSAW 164

Query: 210 KDALDQLQKYKIECIPGIDPEVYACLKLSFDNL 308
           + +LD+L+K  +  I  IDP+++  L+LS+D L
Sbjct: 165 RSSLDKLKKSMLNKIEDIDPQLFTSLRLSYDYL 197


>gb|AFC90295.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron oldhamii]
          Length = 267

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/93 (43%), Positives = 62/93 (66%)
 Frame = +3

Query: 30  ITALTDDEAWDMFKDSVGTHKIESLQDESLAKQVCNKCRGLPLLIRAVGKALRNMSGNVW 209
           I  L+++EAWD+FK  +G +     Q   +AK VC +CRGLP+ I AVG AL++ S + W
Sbjct: 111 IQVLSEEEAWDLFKKKMGNNVESHDQLHHIAKAVCRECRGLPVAILAVGAALKDKSMSAW 170

Query: 210 KDALDQLQKYKIECIPGIDPEVYACLKLSFDNL 308
           + +LD+L+K  +  I  IDP+++  L+LS+D L
Sbjct: 171 RSSLDKLKKSMLNKIEDIDPQLFTSLRLSYDYL 203


>gb|AFC90243.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron hyperythrum]
          Length = 266

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = +3

Query: 30  ITALTDDEAWDMFKDSVGTHKIESLQDESLAKQVCNKCRGLPLLIRAVGKALRNMSGNVW 209
           I  L+++EAWD+FK  +G +    L+D S A  VC +CRGLP+ I AVG AL+  S   W
Sbjct: 112 IQVLSEEEAWDLFKKKMGNNVDSQLRDISYA--VCRECRGLPVAILAVGAALKGKSLYAW 169

Query: 210 KDALDQLQKYKIECIPGIDPEVYACLKLSFDNL-VKDA 320
           K +LD+L+K  +  I  IDP+++  L+LS+D+L  KDA
Sbjct: 170 KSSLDKLKKSMLNNIEDIDPQLFISLRLSYDHLESKDA 207


Top