BLASTX nr result

ID: Bupleurum21_contig00008784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008784
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    99   4e-19
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...    87   1e-15
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...    86   2e-15
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    81   8e-14

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/71 (64%), Positives = 53/71 (74%)
 Frame = +3

Query: 3    RPESSGHKRVGNLLFKLKKRSITIDSCAKLRQVWSENPGELYDEIRDWFQEGFHNRFEKL 182
            RPE+ G +RVGNLL KLK R  TIDSC  LR+ W ENP EL+ EI DWFQE FH +FE L
Sbjct: 1013 RPEALGQRRVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVL 1072

Query: 183  WAEMQHEVLLD 215
            W++M  EVLLD
Sbjct: 1073 WSQMHLEVLLD 1083


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/71 (64%), Positives = 53/71 (74%)
 Frame = +3

Query: 3    RPESSGHKRVGNLLFKLKKRSITIDSCAKLRQVWSENPGELYDEIRDWFQEGFHNRFEKL 182
            RPE+ G +RVGNLL KLK R  TIDSC  LR+ W ENP EL+ EI DWFQE FH +FE L
Sbjct: 1329 RPEALGQRRVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVL 1388

Query: 183  WAEMQHEVLLD 215
            W++M  EVLLD
Sbjct: 1389 WSQMHLEVLLD 1399


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/69 (60%), Positives = 50/69 (72%)
 Frame = +3

Query: 9    ESSGHKRVGNLLFKLKKRSITIDSCAKLRQVWSENPGELYDEIRDWFQEGFHNRFEKLWA 188
            E+ G KRVGNLL KLK R   IDS A LR VW ENP EL+ EI DWFQ+ FH  FE+LW 
Sbjct: 1317 EAFGQKRVGNLLSKLKSR--LIDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWL 1374

Query: 189  EMQHEVLLD 215
            +M +EVL++
Sbjct: 1375 QMLNEVLME 1383


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
            max]
          Length = 1380

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/69 (59%), Positives = 50/69 (72%)
 Frame = +3

Query: 9    ESSGHKRVGNLLFKLKKRSITIDSCAKLRQVWSENPGELYDEIRDWFQEGFHNRFEKLWA 188
            E+ G KRVGNLL KLK R   IDS A LR VW ENP EL+ EI DWFQ+ FH  FE+LW 
Sbjct: 1293 EALGQKRVGNLLSKLKSR--LIDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWL 1350

Query: 189  EMQHEVLLD 215
            +M +E+L++
Sbjct: 1351 QMVNELLME 1359


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/69 (59%), Positives = 47/69 (68%)
 Frame = +3

Query: 3    RPESSGHKRVGNLLFKLKKRSITIDSCAKLRQVWSENPGELYDEIRDWFQEGFHNRFEKL 182
            R ES G KRVGNL+ KL  R   IDS A LR VW +NP EL+ EI DWFQ+GF   FE+L
Sbjct: 1241 RRESFGQKRVGNLISKLNSR--LIDSSATLRIVWKQNPRELFSEILDWFQQGFRKHFEEL 1298

Query: 183  WAEMQHEVL 209
            W +M  EVL
Sbjct: 1299 WLQMLGEVL 1307


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