BLASTX nr result
ID: Bupleurum21_contig00008755
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00008755 (1379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|2... 187 4e-45 ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arab... 187 6e-45 ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain ... 184 5e-44 ref|NP_201417.1| receptor homology-transmembrane-ring H2 domain ... 184 5e-44 gb|ABK25681.1| unknown [Picea sitchensis] 175 3e-41 >ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|222836734|gb|EEE75127.1| predicted protein [Populus trichocarpa] Length = 311 Score = 187 bits (476), Expect = 4e-45 Identities = 101/231 (43%), Positives = 138/231 (59%), Gaps = 5/231 (2%) Frame = +2 Query: 362 INRSGVCGALVVADPLDACSSLQNDAFQFDYL-KFALIVRGNCSFLEKIQNAQLGGFQGA 538 +N S VCG+L VA+PLDACS L+N F+F+ +FALIVRG C+F +KI+NAQ GF+ A Sbjct: 45 LNGSSVCGSLHVANPLDACSPLRN-RFEFNESGRFALIVRGECAFEDKIKNAQSAGFRAA 103 Query: 539 IVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETSWT- 715 IVFDD+ R+LI M+ + EGI + A+FV+ GE L A G +GECC+ S + +WT Sbjct: 104 IVFDDKDNRNLIYMMVNPEGIKVHAVFVTKYAGEILKDRARGKEGECCIYSSRTDAAWTV 163 Query: 716 XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTTHISG-Y 886 FV R ++W+ N P F +S + Sbjct: 164 LAISLISVVVILGLLILVFVTPRHWLHWQRTNNRCKSVDSKMVEALPCFTFRNASLSQCH 223 Query: 887 MAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLK 1039 + +TCAICL+DYK G+ LKVLPC H+FH+ CV SWL ++ T CP+CK D+K Sbjct: 224 VGETCAICLEDYKDGEVLKVLPCHHEFHSTCVDSWLTKWGTFCPVCKLDMK 274 >ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arabidopsis lyrata subsp. lyrata] gi|297312606|gb|EFH43030.1| hypothetical protein ARALYDRAFT_497000 [Arabidopsis lyrata subsp. lyrata] Length = 308 Score = 187 bits (475), Expect = 6e-45 Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 9/237 (3%) Frame = +2 Query: 362 INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529 + ++G+CGAL VADPLD CS L + A Q KFALI+RG CSF +K+ NAQ GF Sbjct: 47 VTKNGICGALYVADPLDGCSPLLHAAASNWTQQSTTKFALIIRGECSFEDKLLNAQNSGF 106 Query: 530 QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709 Q IV+D+ DLI M + + I + A+FVSN GE L K+A G DGECC+ P K ++ Sbjct: 107 QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLYPPTKGSA 166 Query: 710 WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874 WT AF R WR R+ +I P F + H Sbjct: 167 WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHNRTIRLDAKLVHTLPCFTFTDSAHH 226 Query: 875 ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045 +G +TCAICL+DY+ G+SL++LPC+H FH C+ SWL ++ T CP+CK+D++TE Sbjct: 227 KAG---ETCAICLEDYRFGESLRLLPCQHAFHLSCIDSWLTKWGTSCPVCKHDIRTE 280 >ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis thaliana] gi|332010783|gb|AED98166.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis thaliana] Length = 290 Score = 184 bits (467), Expect = 5e-44 Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 9/237 (3%) Frame = +2 Query: 362 INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529 + ++G+CGAL VADPLD CS L + A Q KFALI+RG CSF +K+ NAQ GF Sbjct: 47 VTKNGICGALYVADPLDGCSPLLHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGF 106 Query: 530 QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709 Q IV+D+ DLI M + + I + A+FVSN GE L K+A G DGECC+ P + ++ Sbjct: 107 QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSA 166 Query: 710 WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874 WT AF R WR R+ +I P F + H Sbjct: 167 WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHH 226 Query: 875 ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045 +G +TCAICL+DY+ G+SL++LPC+H FH +C+ SWL ++ T CP+CK+D++TE Sbjct: 227 KAG---ETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280 >ref|NP_201417.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis thaliana] gi|6942147|gb|AAF32325.1|AF218807_1 ReMembR-H2 protein JR700 [Arabidopsis thaliana] gi|10177131|dbj|BAB10421.1| ReMembR-H2 protein JR700 [Arabidopsis thaliana] gi|14334832|gb|AAK59594.1| putative ReMembR-H2 protein JR700 [Arabidopsis thaliana] gi|15293205|gb|AAK93713.1| putative ReMembR-H2 protein JR700 [Arabidopsis thaliana] gi|332010784|gb|AED98167.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis thaliana] Length = 310 Score = 184 bits (467), Expect = 5e-44 Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 9/237 (3%) Frame = +2 Query: 362 INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529 + ++G+CGAL VADPLD CS L + A Q KFALI+RG CSF +K+ NAQ GF Sbjct: 47 VTKNGICGALYVADPLDGCSPLLHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGF 106 Query: 530 QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709 Q IV+D+ DLI M + + I + A+FVSN GE L K+A G DGECC+ P + ++ Sbjct: 107 QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSA 166 Query: 710 WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874 WT AF R WR R+ +I P F + H Sbjct: 167 WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHH 226 Query: 875 ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045 +G +TCAICL+DY+ G+SL++LPC+H FH +C+ SWL ++ T CP+CK+D++TE Sbjct: 227 KAG---ETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280 >gb|ABK25681.1| unknown [Picea sitchensis] Length = 486 Score = 175 bits (443), Expect = 3e-41 Identities = 94/234 (40%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Frame = +2 Query: 362 INRSGVCGALVVADPLDACSSLQNDAFQFD--YLKFALIVRGNCSFLEKIQNAQLGGFQG 535 I G CG L +A+P DAC+ L N A + Y FALI+RG C+F +K++NAQ GF Sbjct: 55 IRGPGACGVLQLAEPFDACTQLTNKAVPREGVYASFALIIRGTCTFEKKVRNAQAAGFSA 114 Query: 536 AIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETSWT 715 AIV+++ DL+SM G+S+G+ I A+FVS GE L+KHA + E ++PS + T+W+ Sbjct: 115 AIVYNNEDSSDLVSMAGNSDGVTIHAVFVSKVAGEMLLKHAGDPNVEFWLVPSYENTAWS 174 Query: 716 -XXXXXXXXXXXXXXXXTAFVVAR-----VYWRNRNRSSIXXXXXXXXXXPSDVFNTTHI 877 T F V R V R+R R PS +F++ Sbjct: 175 VMAIAFISLLAICAVLATCFFVRRHRLRHVGLRSRVREFHGMSGRLVKALPSMIFSSVVD 234 Query: 878 SGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLK 1039 ++TCAICL+DYK GD L++LPC HKFH C+ SWL + T CP+CK D + Sbjct: 235 DNCTSETCAICLEDYKAGDKLRILPCHHKFHLLCIDSWLTMWRTFCPVCKRDAR 288