BLASTX nr result

ID: Bupleurum21_contig00008755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008755
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-45
ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arab...   187   6e-45
ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain ...   184   5e-44
ref|NP_201417.1| receptor homology-transmembrane-ring H2 domain ...   184   5e-44
gb|ABK25681.1| unknown [Picea sitchensis]                             175   3e-41

>ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|222836734|gb|EEE75127.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  187 bits (476), Expect = 4e-45
 Identities = 101/231 (43%), Positives = 138/231 (59%), Gaps = 5/231 (2%)
 Frame = +2

Query: 362  INRSGVCGALVVADPLDACSSLQNDAFQFDYL-KFALIVRGNCSFLEKIQNAQLGGFQGA 538
            +N S VCG+L VA+PLDACS L+N  F+F+   +FALIVRG C+F +KI+NAQ  GF+ A
Sbjct: 45   LNGSSVCGSLHVANPLDACSPLRN-RFEFNESGRFALIVRGECAFEDKIKNAQSAGFRAA 103

Query: 539  IVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETSWT- 715
            IVFDD+  R+LI M+ + EGI + A+FV+   GE L   A G +GECC+  S  + +WT 
Sbjct: 104  IVFDDKDNRNLIYMMVNPEGIKVHAVFVTKYAGEILKDRARGKEGECCIYSSRTDAAWTV 163

Query: 716  XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTTHISG-Y 886
                              FV  R  ++W+  N              P   F    +S  +
Sbjct: 164  LAISLISVVVILGLLILVFVTPRHWLHWQRTNNRCKSVDSKMVEALPCFTFRNASLSQCH 223

Query: 887  MAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLK 1039
            + +TCAICL+DYK G+ LKVLPC H+FH+ CV SWL ++ T CP+CK D+K
Sbjct: 224  VGETCAICLEDYKDGEVLKVLPCHHEFHSTCVDSWLTKWGTFCPVCKLDMK 274


>ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arabidopsis lyrata subsp.
            lyrata] gi|297312606|gb|EFH43030.1| hypothetical protein
            ARALYDRAFT_497000 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  187 bits (475), Expect = 6e-45
 Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 9/237 (3%)
 Frame = +2

Query: 362  INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529
            + ++G+CGAL VADPLD CS L + A     Q    KFALI+RG CSF +K+ NAQ  GF
Sbjct: 47   VTKNGICGALYVADPLDGCSPLLHAAASNWTQQSTTKFALIIRGECSFEDKLLNAQNSGF 106

Query: 530  QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709
            Q  IV+D+    DLI M  + + I + A+FVSN  GE L K+A G DGECC+ P  K ++
Sbjct: 107  QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLYPPTKGSA 166

Query: 710  WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874
            WT                  AF   R    WR R+  +I          P   F  +  H
Sbjct: 167  WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHNRTIRLDAKLVHTLPCFTFTDSAHH 226

Query: 875  ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045
             +G   +TCAICL+DY+ G+SL++LPC+H FH  C+ SWL ++ T CP+CK+D++TE
Sbjct: 227  KAG---ETCAICLEDYRFGESLRLLPCQHAFHLSCIDSWLTKWGTSCPVCKHDIRTE 280


>ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis
            thaliana] gi|332010783|gb|AED98166.1| receptor
            homology-transmembrane-ring H2 domain protein 1
            [Arabidopsis thaliana]
          Length = 290

 Score =  184 bits (467), Expect = 5e-44
 Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 9/237 (3%)
 Frame = +2

Query: 362  INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529
            + ++G+CGAL VADPLD CS L + A     Q    KFALI+RG CSF +K+ NAQ  GF
Sbjct: 47   VTKNGICGALYVADPLDGCSPLLHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGF 106

Query: 530  QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709
            Q  IV+D+    DLI M  + + I + A+FVSN  GE L K+A G DGECC+ P  + ++
Sbjct: 107  QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSA 166

Query: 710  WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874
            WT                  AF   R    WR R+  +I          P   F  +  H
Sbjct: 167  WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHH 226

Query: 875  ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045
             +G   +TCAICL+DY+ G+SL++LPC+H FH +C+ SWL ++ T CP+CK+D++TE
Sbjct: 227  KAG---ETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280


>ref|NP_201417.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis
            thaliana] gi|6942147|gb|AAF32325.1|AF218807_1 ReMembR-H2
            protein JR700 [Arabidopsis thaliana]
            gi|10177131|dbj|BAB10421.1| ReMembR-H2 protein JR700
            [Arabidopsis thaliana] gi|14334832|gb|AAK59594.1|
            putative ReMembR-H2 protein JR700 [Arabidopsis thaliana]
            gi|15293205|gb|AAK93713.1| putative ReMembR-H2 protein
            JR700 [Arabidopsis thaliana] gi|332010784|gb|AED98167.1|
            receptor homology-transmembrane-ring H2 domain protein 1
            [Arabidopsis thaliana]
          Length = 310

 Score =  184 bits (467), Expect = 5e-44
 Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 9/237 (3%)
 Frame = +2

Query: 362  INRSGVCGALVVADPLDACSSLQNDAF----QFDYLKFALIVRGNCSFLEKIQNAQLGGF 529
            + ++G+CGAL VADPLD CS L + A     Q    KFALI+RG CSF +K+ NAQ  GF
Sbjct: 47   VTKNGICGALYVADPLDGCSPLLHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGF 106

Query: 530  QGAIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETS 709
            Q  IV+D+    DLI M  + + I + A+FVSN  GE L K+A G DGECC+ P  + ++
Sbjct: 107  QAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSA 166

Query: 710  WT-XXXXXXXXXXXXXXXXTAFVVAR--VYWRNRNRSSIXXXXXXXXXXPSDVFNTT--H 874
            WT                  AF   R    WR R+  +I          P   F  +  H
Sbjct: 167  WTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHH 226

Query: 875  ISGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLKTE 1045
             +G   +TCAICL+DY+ G+SL++LPC+H FH +C+ SWL ++ T CP+CK+D++TE
Sbjct: 227  KAG---ETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280


>gb|ABK25681.1| unknown [Picea sitchensis]
          Length = 486

 Score =  175 bits (443), Expect = 3e-41
 Identities = 94/234 (40%), Positives = 131/234 (55%), Gaps = 8/234 (3%)
 Frame = +2

Query: 362  INRSGVCGALVVADPLDACSSLQNDAFQFD--YLKFALIVRGNCSFLEKIQNAQLGGFQG 535
            I   G CG L +A+P DAC+ L N A   +  Y  FALI+RG C+F +K++NAQ  GF  
Sbjct: 55   IRGPGACGVLQLAEPFDACTQLTNKAVPREGVYASFALIIRGTCTFEKKVRNAQAAGFSA 114

Query: 536  AIVFDDRVQRDLISMIGSSEGIWIPAIFVSNEVGETLMKHALGVDGECCMLPSLKETSWT 715
            AIV+++    DL+SM G+S+G+ I A+FVS   GE L+KHA   + E  ++PS + T+W+
Sbjct: 115  AIVYNNEDSSDLVSMAGNSDGVTIHAVFVSKVAGEMLLKHAGDPNVEFWLVPSYENTAWS 174

Query: 716  -XXXXXXXXXXXXXXXXTAFVVAR-----VYWRNRNRSSIXXXXXXXXXXPSDVFNTTHI 877
                             T F V R     V  R+R R             PS +F++   
Sbjct: 175  VMAIAFISLLAICAVLATCFFVRRHRLRHVGLRSRVREFHGMSGRLVKALPSMIFSSVVD 234

Query: 878  SGYMAKTCAICLQDYKQGDSLKVLPCKHKFHADCVGSWLIRYNTICPLCKYDLK 1039
                ++TCAICL+DYK GD L++LPC HKFH  C+ SWL  + T CP+CK D +
Sbjct: 235  DNCTSETCAICLEDYKAGDKLRILPCHHKFHLLCIDSWLTMWRTFCPVCKRDAR 288


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