BLASTX nr result

ID: Bupleurum21_contig00008754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008754
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE74631.1| unknown [Vitis vinifera]                               659   0.0  
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   655   0.0  
ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin...   636   e-180
ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin...   626   e-177
ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containin...   625   e-177

>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  659 bits (1700), Expect = 0.0
 Identities = 337/459 (73%), Positives = 380/459 (82%), Gaps = 13/459 (2%)
 Frame = -3

Query: 1473 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 1294
            WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGD+CEYAHGVFECWLHPAQYRT
Sbjct: 285  WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDLCEYAHGVFECWLHPAQYRT 344

Query: 1293 RLCKDGTSCARRVCFFAHIPDELRPLYVSTGSAVPSPRSNTSAASAMDMAVAXXXXXXXX 1114
            RLCKDGT+CARRVCFFAH  +ELRPLY+STGSAVPSPR+ +  A+AMDMA A        
Sbjct: 345  RLCKDGTNCARRVCFFAHTSEELRPLYLSTGSAVPSPRA-SGPANAMDMAAALSLLPGSP 403

Query: 1113 XXXSVMSPG-FNQPMSPSGNG-AHSSVAWPQPSVPALHLPGSNMQSSRLRSSLNARDIPP 940
               SVMSP  F QPMSPS NG +HSS AWPQP+VP L+LPGSN QSSRLRSSLNARDIPP
Sbjct: 404  SSVSVMSPSPFAQPMSPSANGISHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPP 463

Query: 939  EDFQMLQDMDVHQLLLNDLACLSQSRPSPLSLNRSGRPKALTPSNLEELFSAELASSPRY 760
            EDF ML D D  Q LLNDL+C SQ R +  SL+RS R K LTPSNLEELFSAE++SSPRY
Sbjct: 464  EDFNMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRY 523

Query: 759  SDQAASTGAFSPSHRSAVLNQF-QQQQNMLSPINTNVFSPKNADHPLSQASYSVSSPGRM 583
            SD   S+  FSPSH+SA+LNQF QQQQ+MLSPINTNVFSPKN +HPL QAS+ +SSPGRM
Sbjct: 524  SD---SSAVFSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQASFGISSPGRM 580

Query: 582  SPRNVEPISPMGSRLTAFAQREFXXXXQMRSLSSRDLGSHN-VSMVGSPVNSWSKWSSPS 406
            SPR++EPISPMG RL+A AQRE     Q+RSLSSRDLGS+N  S+VGSPVNSWSKW SP+
Sbjct: 581  SPRSMEPISPMGPRLSAIAQRE-KQHQQLRSLSSRDLGSNNPASVVGSPVNSWSKWGSPT 639

Query: 405  GKVDWSVNGGEHSWLQKSSSFDHENKGDEPDLSWVQSLVKESPPE-MKDKLSAPVAIAAP 229
            GK+DWSVNG E   L++SSSF+  N G+EPDLSWVQSLVKESPPE MK+KL+APV+ +A 
Sbjct: 640  GKLDWSVNGDEMGRLKRSSSFELGNNGEEPDLSWVQSLVKESPPEMMKEKLAAPVSASAS 699

Query: 228  SGEG--------SISNSHVEPVDHTVLGAWLEQIQLDQL 136
            SGEG        S SNS ++ VDH+V+GAWLEQ+QLDQL
Sbjct: 700  SGEGLNSNSQIESNSNSQIDSVDHSVIGAWLEQMQLDQL 738


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
            vinifera]
          Length = 740

 Score =  655 bits (1691), Expect = 0.0
 Identities = 335/459 (72%), Positives = 378/459 (82%), Gaps = 13/459 (2%)
 Frame = -3

Query: 1473 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 1294
            WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGD+CEYAHGVFECWLHPAQYRT
Sbjct: 285  WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDLCEYAHGVFECWLHPAQYRT 344

Query: 1293 RLCKDGTSCARRVCFFAHIPDELRPLYVSTGSAVPSPRSNTSAASAMDMAVAXXXXXXXX 1114
            RLCKDGT+CARRVCFFAH  +ELRPLY+STGSAVPSPR+ +  A+AMDMA A        
Sbjct: 345  RLCKDGTNCARRVCFFAHTSEELRPLYLSTGSAVPSPRA-SGPANAMDMAAALSLLPGSP 403

Query: 1113 XXXSVMSPG-FNQPMSPSGNG-AHSSVAWPQPSVPALHLPGSNMQSSRLRSSLNARDIPP 940
               SVMSP  F QPMSPS NG +HSS AWPQP+VP L+LPGSN QSSRLRSSLNARDIPP
Sbjct: 404  SSVSVMSPSPFAQPMSPSANGISHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPP 463

Query: 939  EDFQMLQDMDVHQLLLNDLACLSQSRPSPLSLNRSGRPKALTPSNLEELFSAELASSPRY 760
            EDF ML D D  Q LLNDL+C SQ R +  SL+RS R K LTPSNLEELFSAE++SSPRY
Sbjct: 464  EDFNMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRY 523

Query: 759  SDQAASTGAFSPSHRSAVLNQF-QQQQNMLSPINTNVFSPKNADHPLSQASYSVSSPGRM 583
            SD   S+  FSPSH+SA+LNQF QQQQ+MLSPINTNVFSPKN +HPL QAS+ +SSPGRM
Sbjct: 524  SD---SSAVFSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQASFGISSPGRM 580

Query: 582  SPRNVEPISPMGSRLTAFAQREFXXXXQMRSLSSRDLGSHN-VSMVGSPVNSWSKWSSPS 406
            SPR++EPISPMG RL+A AQRE     Q+RSLSSRDLGS+N  S+VGSPVNSWSKW SP+
Sbjct: 581  SPRSMEPISPMGPRLSAIAQRE-KQHQQLRSLSSRDLGSNNPASVVGSPVNSWSKWGSPT 639

Query: 405  GKVDWSVNGGEHSWLQKSSSFDHENKGDEPDLSWVQSLVKESPPE-MKDKLSAPVAIAAP 229
            GK+DWSVNG E   L++SSSF+  N G+EPDLSWV SLVKESPPE MK+K +APV+ +A 
Sbjct: 640  GKLDWSVNGDEMGRLKRSSSFELGNNGEEPDLSWVHSLVKESPPEMMKEKFAAPVSASAS 699

Query: 228  SGEG--------SISNSHVEPVDHTVLGAWLEQIQLDQL 136
            SGEG        S SNS ++ VDH+V+GAWLEQ+QLDQL
Sbjct: 700  SGEGLNSNSQIESNSNSQIDSVDHSVIGAWLEQMQLDQL 738


>ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 701

 Score =  636 bits (1640), Expect = e-180
 Identities = 324/453 (71%), Positives = 366/453 (80%), Gaps = 7/453 (1%)
 Frame = -3

Query: 1473 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 1294
            WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT
Sbjct: 249  WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 308

Query: 1293 RLCKDGTSCARRVCFFAHIPDELRPLYVSTGSAVPSPRSNTSAASAMDMAVAXXXXXXXX 1114
            RLCKDGTSC RRVCFFAH  +ELRPLYVSTGSAVPSPRS+ S  + MDMA A        
Sbjct: 309  RLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASTPNVMDMAAAMSLFPGSP 368

Query: 1113 XXXSVMSPG-FNQPMSPSGNG-AHSSVAWPQPSVPALHLPGSNMQSSRLRSSLNARDIPP 940
               S MSP  F QPMSPS +G +HSS AWPQP+VPALHLPGSN+Q+SRLRSSL+ARD+PP
Sbjct: 369  SSISSMSPSPFAQPMSPSTSGISHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPP 428

Query: 939  EDFQMLQDMDVHQLLLNDLACLSQSRPSPLSLNRSGRPKALTPSNLEELFSAELASSPRY 760
            EDF +LQD D  Q LL+DL C SQ RP  +S++RSGR K LTPSNL+ELFSAE++SSPRY
Sbjct: 429  EDFDVLQDFDGQQHLLSDLGCFSQPRPGAISVSRSGRSKTLTPSNLDELFSAEISSSPRY 488

Query: 759  SDQAASTGAFSPSHRSAVLNQFQQQQNMLSPINTNVFSPKNADHPLSQASYSVSSPGRMS 580
            SD A ++  FSP H+S ++NQFQQ Q+ LSPINT+V SP+N +HPL QAS+ VSSPGRMS
Sbjct: 489  SDPAVAS-VFSPRHKSTIMNQFQQLQSSLSPINTSVSSPRNVEHPLLQASFGVSSPGRMS 547

Query: 579  PRNVEPISPMGSRLTAFAQREFXXXXQMRSLSSRDLGSH-NVSMVGSPVNSWSKWSSP-- 409
            PR++EPISPM SRL+AFAQRE     Q+RSLSSRDLG++   SMVGSPVNSWS W SP  
Sbjct: 548  PRSMEPISPMSSRLSAFAQRE-KQHQQLRSLSSRDLGANVPASMVGSPVNSWSNWGSPHG 606

Query: 408  SGKVDWSVNGGEHSWLQKSSSFDHENKGDEPDLSWVQSLVKESPPEMKDKL--SAPVAIA 235
            +GKVDWSVNG E   LQ+SSSF+  N G+EPDLSWVQSLVKESP E+K+KL  S PVA  
Sbjct: 607  NGKVDWSVNGNELGRLQRSSSFELGNNGEEPDLSWVQSLVKESPSEIKEKLTGSGPVASV 666

Query: 234  APSGEGSISNSHVEPVDHTVLGAWLEQIQLDQL 136
                    SN  VE VDH+VLGAWLEQ+QLDQL
Sbjct: 667  DGPSSNPKSNPQVESVDHSVLGAWLEQMQLDQL 699


>ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 683

 Score =  626 bits (1615), Expect = e-177
 Identities = 323/452 (71%), Positives = 366/452 (80%), Gaps = 6/452 (1%)
 Frame = -3

Query: 1473 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 1294
            WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT
Sbjct: 237  WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 296

Query: 1293 RLCKDGTSCARRVCFFAHIPDELRPLYVSTGSAVPSPRSNTSAASAMDMAVAXXXXXXXX 1114
            RLCKDGTSC RRVCFFAH  +ELRPLYVSTGSAVPSPRS+ S  + MDMA A        
Sbjct: 297  RLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASTPNVMDMAAAMSLFPGSP 356

Query: 1113 XXXSVMSPG-FNQPMSPSGNG-AHSSVAWPQPSVPALHLPGSNMQSSRLRSSLNARDIPP 940
               S MSP  F QPMSPS +G +HSS AWPQP+VPALHLPGSN+Q+SRLRSSL+ARD+PP
Sbjct: 357  SSISSMSPSPFAQPMSPSTSGISHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPP 416

Query: 939  EDFQMLQDMDVHQLLLNDLACLSQSRPSPLSLNRSGRPKALTPSNLEELFSAELASSPRY 760
            ED  +LQD D  Q LLNDL C SQ  P  +S++RSGR K LTPSNL+ELFSAE++SSPRY
Sbjct: 417  EDLDVLQDFDGQQHLLNDLGCFSQPHPGGISVSRSGRSKTLTPSNLDELFSAEISSSPRY 476

Query: 759  SDQAASTGAFSPSHRSAVLNQFQQQQNMLSPINTNVFSPKNADHPLSQASYSVSSPGRMS 580
            SD A ++  FSP+H+SA++NQFQQ Q+ LSPINT+V SP+N +HPL QAS+ VSSPGRMS
Sbjct: 477  SDPAVAS-VFSPTHKSAIMNQFQQLQSSLSPINTSVLSPRNVEHPLFQASFGVSSPGRMS 535

Query: 579  PRNVEPISPMGSRLTAFAQREFXXXXQMRSLSSRDLGSH-NVSMVGSPVNSWSKWSSP-- 409
            PR++EPISPM SRL +FAQRE     Q+RSLSSRDLG++  VSMVGSPVNSWS W SP  
Sbjct: 536  PRSMEPISPMSSRL-SFAQRE-KQHQQLRSLSSRDLGANIPVSMVGSPVNSWSNWGSPHG 593

Query: 408  SGKVDWSVNGGEHSWLQKSSSFDHENKGDEPDLSWVQSLVKESPPEMKD-KLSAPVAIAA 232
            +GKVDWSVNG E   L +SSSF+  N G+EPDLSWVQSLVKESP E+K+   S PVA A 
Sbjct: 594  NGKVDWSVNGNELGRLHRSSSFELGNNGEEPDLSWVQSLVKESPSEIKELGGSGPVAFA- 652

Query: 231  PSGEGSISNSHVEPVDHTVLGAWLEQIQLDQL 136
               +G  SN  VE VDH+VLGAWLEQ+QLDQL
Sbjct: 653  ---DGPSSNPQVESVDHSVLGAWLEQMQLDQL 681


>ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus] gi|449516906|ref|XP_004165487.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            30-like isoform 1 [Cucumis sativus]
            gi|449516908|ref|XP_004165488.1| PREDICTED: zinc finger
            CCCH domain-containing protein 30-like isoform 2 [Cucumis
            sativus]
          Length = 701

 Score =  625 bits (1613), Expect = e-177
 Identities = 320/452 (70%), Positives = 358/452 (79%), Gaps = 6/452 (1%)
 Frame = -3

Query: 1473 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 1294
            WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT
Sbjct: 250  WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 309

Query: 1293 RLCKDGTSCARRVCFFAHIPDELRPLYVSTGSAVPSPRSNTSAASAMDMAVAXXXXXXXX 1114
            RLCKDGT+C+RRVCFFAH  DELRPLYVSTGSAVPSPRS TS ASAMD            
Sbjct: 310  RLCKDGTNCSRRVCFFAHTTDELRPLYVSTGSAVPSPRSCTSGASAMDYTTVMNLLPGSP 369

Query: 1113 XXXSVMSPG-FNQPMSPSGNG-AHSSVAWPQPSVPALHLPGSNMQSSRLRSSLNARDIPP 940
                VMSP  F  PMSPS NG +HSSV WPQP+VPALHLPGSN+QSSRLRSSL+ARD+P 
Sbjct: 370  SSVPVMSPSPFTPPMSPSANGMSHSSVPWPQPNVPALHLPGSNIQSSRLRSSLSARDMPV 429

Query: 939  EDFQMLQDMDV-HQLLLNDLACLSQSRPSPLSLNRSGRPKALTPSNLEELFSAELASSPR 763
            EDF  L D D+  Q LLNDL CLSQ   S  SLNRSGR K +TPSNL++LFSAE +SSPR
Sbjct: 430  EDFDYLSDFDMQQQQLLNDLNCLSQPPLSSNSLNRSGRMKTMTPSNLDDLFSAE-SSSPR 488

Query: 762  YSDQAASTGAFSPSHRSAVLNQFQQQQNMLSPINTNVFSPKNADHPLSQASYSVSSPGRM 583
            YSDQ+ ++  FSP+H+SAV+NQFQQQQNMLSPINTN FSPKN DHPL QAS+ V S GRM
Sbjct: 489  YSDQSLASAVFSPTHKSAVINQFQQQQNMLSPINTN-FSPKNVDHPLLQASFGVPSSGRM 547

Query: 582  SPRNVEPISPMGSRLTAFAQREFXXXXQMRSLSSRDLGSHNVSMVGSPVNSWSKWSSPSG 403
            SPRN+EPISP+GSRL+  AQRE     Q RSLSSR+LGS++ S+VGSP NSWSKW   +G
Sbjct: 548  SPRNLEPISPVGSRLSMLAQRE---KQQFRSLSSRELGSNSPSIVGSPANSWSKWGPSNG 604

Query: 402  KVDWSVNGGEHSWLQKSSSFDHENKGDEPDLSWVQSLVKESPPEMKDKLSAP---VAIAA 232
            + DW+VN  E   L++SSSF+  N G+EPDLSWVQSLVKESP E+K+K + P   V    
Sbjct: 605  RPDWAVNADEMGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKQAHPNLGVDSFV 664

Query: 231  PSGEGSISNSHVEPVDHTVLGAWLEQIQLDQL 136
             SGE S  NS +E VDH  LGAWLEQ+QLD L
Sbjct: 665  SSGESSNMNSQMESVDHAALGAWLEQMQLDHL 696


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