BLASTX nr result

ID: Bupleurum21_contig00008735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008735
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36742.3| unnamed protein product [Vitis vinifera]               62   9e-08
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...    62   9e-08

>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   LRLPDELRNVIIKRALDRTGSIAASKPSG---EGSVKKGSSNANEXXXXXXXXXXXLEKS 173
           L+LP+++R  I+KRAL+RT S+      G   +G    G  ++               KS
Sbjct: 274 LKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAGEGSSRGKNFRRFDRLERSGKS 333

Query: 174 DRWVFSRMPSFLTRALSTRSKVVAGDGEASTSAGPGGGDSSVRGDKTSGSKDNDPAKLP 350
           DRW FS  P F +RA S +S  VA DGEA++S  P          K S     DPA  P
Sbjct: 334 DRWTFSITPPFFSRASSLKSPKVAADGEATSSTSP---RKPTLTPKASFGAKRDPAGTP 389


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   LRLPDELRNVIIKRALDRTGSIAASKPSG---EGSVKKGSSNANEXXXXXXXXXXXLEKS 173
           L+LP+++R  I+KRAL+RT S+      G   +G    G  ++               KS
Sbjct: 289 LKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAGEGSSRGKNFRRFDRLERSGKS 348

Query: 174 DRWVFSRMPSFLTRALSTRSKVVAGDGEASTSAGPGGGDSSVRGDKTSGSKDNDPAKLP 350
           DRW FS  P F +RA S +S  VA DGEA++S  P          K S     DPA  P
Sbjct: 349 DRWTFSITPPFFSRASSLKSPKVAADGEATSSTSP---RKPTLTPKASFGAKRDPAGTP 404


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