BLASTX nr result

ID: Bupleurum21_contig00008686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008686
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63495.1| hypothetical protein VITISV_011670 [Vitis vinifera]   117   1e-24
emb|CBI28180.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   1e-24
ref|XP_003551661.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   4e-24
ref|XP_002304009.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>emb|CAN63495.1| hypothetical protein VITISV_011670 [Vitis vinifera]
          Length = 757

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 10/111 (9%)
 Frame = -1

Query: 321 LIRIFYGDLSRLCLSVISGKRGKM----------DKRRQLMNLLKDQRSNGMANKLALTL 172
           L+RIFY +   L +  +      +          DKR  LM+LL+ Q +N    K ALTL
Sbjct: 477 LLRIFYANYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHLMDLLQSQMTNRTPKKYALTL 536

Query: 171 VFVETKRGADALEQWLCRNGFPATAIHGDKVQMERERALRSFKNGTTPIMV 19
           VFVETKRG DALEQWLC NG  ATAIHGDKVQMERERA++SFK+G TPIMV
Sbjct: 537 VFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERAMKSFKSGATPIMV 587


>emb|CBI28180.3| unnamed protein product [Vitis vinifera]
          Length = 916

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/77 (75%), Positives = 63/77 (81%)
 Frame = -1

Query: 249 DKRRQLMNLLKDQRSNGMANKLALTLVFVETKRGADALEQWLCRNGFPATAIHGDKVQME 70
           DKR  LM+LL+ Q +N    K ALTLVFVETKRG DALEQWLC NG  ATAIHGDKVQME
Sbjct: 657 DKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQME 716

Query: 69  RERALRSFKNGTTPIMV 19
           RERAL+SFK+G TPIMV
Sbjct: 717 RERALKSFKSGATPIMV 733


>ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 615

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/77 (75%), Positives = 63/77 (81%)
 Frame = -1

Query: 249 DKRRQLMNLLKDQRSNGMANKLALTLVFVETKRGADALEQWLCRNGFPATAIHGDKVQME 70
           DKR  LM+LL+ Q +N    K ALTLVFVETKRG DALEQWLC NG  ATAIHGDKVQME
Sbjct: 369 DKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQME 428

Query: 69  RERALRSFKNGTTPIMV 19
           RERAL+SFK+G TPIMV
Sbjct: 429 RERALKSFKSGATPIMV 445


>ref|XP_003551661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 591

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/77 (71%), Positives = 63/77 (81%)
 Frame = -1

Query: 249 DKRRQLMNLLKDQRSNGMANKLALTLVFVETKRGADALEQWLCRNGFPATAIHGDKVQME 70
           DKR  LM+LL  Q++NG+  K ALTLVFVETK+GADALE WLCRN FPAT IHGD+ Q E
Sbjct: 371 DKRSHLMDLLHAQKANGVQGKQALTLVFVETKKGADALEHWLCRNNFPATTIHGDRTQQE 430

Query: 69  RERALRSFKNGTTPIMV 19
           RE ALRSFK+G TPI+V
Sbjct: 431 RELALRSFKSGNTPILV 447


>ref|XP_002304009.1| predicted protein [Populus trichocarpa] gi|222841441|gb|EEE78988.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/77 (71%), Positives = 64/77 (83%)
 Frame = -1

Query: 249 DKRRQLMNLLKDQRSNGMANKLALTLVFVETKRGADALEQWLCRNGFPATAIHGDKVQME 70
           DKR  LM+LL  QR+NG+  K ALTLVFVETK+GAD+LE WLC NGFPAT+IHGD+ Q E
Sbjct: 201 DKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCINGFPATSIHGDRSQQE 260

Query: 69  RERALRSFKNGTTPIMV 19
           RE+ALRSFK G TPI+V
Sbjct: 261 REQALRSFKTGNTPILV 277


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