BLASTX nr result

ID: Bupleurum21_contig00008681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008681
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY84675.1| multicopy suppressor of IRA1 [Nicotiana tabacum]       796   0.0  
ref|NP_001234002.1| WD-40 repeat-containing protein MSI1 [Solanu...   794   0.0  
ref|XP_002265142.1| PREDICTED: WD-40 repeat-containing protein M...   791   0.0  
ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ri...   790   0.0  
ref|XP_004133950.1| PREDICTED: WD-40 repeat-containing protein M...   786   0.0  

>gb|ABY84675.1| multicopy suppressor of IRA1 [Nicotiana tabacum]
          Length = 424

 Score =  796 bits (2055), Expect = 0.0
 Identities = 370/405 (91%), Positives = 388/405 (95%)
 Frame = -1

Query: 1380 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEQPGKDYSVQKMILGTHTSEDEPN 1201
            EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREE PGKDYSVQKMILGTHTSE+EPN
Sbjct: 19   EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78

Query: 1200 YLMLAQVQLPLEDAENDARQYDDDRADLGGFGAANAKVQILQQIHHDGEVNRARYMPQNP 1021
            YLMLAQVQLPLEDAENDAR YDDDR++ GGFG AN KVQI+QQI+HDGEVNRARYMPQN 
Sbjct: 79   YLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNS 138

Query: 1020 FLIATKTVSAEVYLFDYSKHPSKPPADGTCNPDLRLRGHNTEGYGLSWSQFKQGHLLSGS 841
            F+IATKT+SAEVY+FDYSKHPSKPP DG CNPDLRLRGH+TEGYGLSWSQFKQGHLLSGS
Sbjct: 139  FIIATKTISAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGS 198

Query: 840  DDSQICLWDINASPKNKALDAMQIFKIHRGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 661
            DD+Q CLWDINA+PKNKALDAMQIFKIH GVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR
Sbjct: 199  DDAQTCLWDINATPKNKALDAMQIFKIHEGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 258

Query: 660  TPSVTKPVQSVVAHQSEVNCLAFNPFNEWIVATGSTDKTVKLFDLRNINNALHTFDSHKD 481
            TPSVTKP+QSVVAHQSEVNCLAFNPFNEW+VATGSTDKTVKLFDLR I+ ALHT D HK+
Sbjct: 259  TPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKE 318

Query: 480  EVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAEDGPPELLFIHGGHTSKIS 301
            EVFQVGW+PKNETILASCCLGRRLMVWDLSRIDEEQTP+DAEDGPPELLFIHGGHTSKIS
Sbjct: 319  EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378

Query: 300  DFSWNPCEPWVVASVAEDNILQIWQMAENIYHDEDDLPGDDMGRA 166
            DFSWNPCE WVVASVAEDNILQIWQMAENIYHDEDDLPGDD  +A
Sbjct: 379  DFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDDATKA 423


>ref|NP_001234002.1| WD-40 repeat-containing protein MSI1 [Solanum lycopersicum]
            gi|3122386|sp|O22466.1|MSI1_SOLLC RecName: Full=WD-40
            repeat-containing protein MSI1 gi|2394227|gb|AAB70241.1|
            WD-40 repeat protein [Solanum lycopersicum]
          Length = 424

 Score =  794 bits (2050), Expect = 0.0
 Identities = 368/401 (91%), Positives = 386/401 (96%)
 Frame = -1

Query: 1380 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEQPGKDYSVQKMILGTHTSEDEPN 1201
            EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREE  GKDYSVQKMILGTHTSE+EPN
Sbjct: 19   EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSENEPN 78

Query: 1200 YLMLAQVQLPLEDAENDARQYDDDRADLGGFGAANAKVQILQQIHHDGEVNRARYMPQNP 1021
            YLMLAQVQLPLEDAENDAR YDDDR++ GGFG AN KVQI+QQI+HDGEVNRARYMPQNP
Sbjct: 79   YLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNP 138

Query: 1020 FLIATKTVSAEVYLFDYSKHPSKPPADGTCNPDLRLRGHNTEGYGLSWSQFKQGHLLSGS 841
            F+IATKTVSAEVY+FDYSKHPSKPP DG CNPDLRLRGH+TEGYGLSWSQFKQGHLLSGS
Sbjct: 139  FIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGS 198

Query: 840  DDSQICLWDINASPKNKALDAMQIFKIHRGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 661
            DDS ICLWDINA+PKNKAL+AMQIFK+H GVVEDVAWHLRHEYLFGSVGDDQYLH+WDLR
Sbjct: 199  DDSHICLWDINATPKNKALEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLR 258

Query: 660  TPSVTKPVQSVVAHQSEVNCLAFNPFNEWIVATGSTDKTVKLFDLRNINNALHTFDSHKD 481
            TPSVTKP+QSVVAHQSEVNCLAFNPFNEW+VATGSTDKTVKLFDLR I+ ALHT D HK+
Sbjct: 259  TPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKE 318

Query: 480  EVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAEDGPPELLFIHGGHTSKIS 301
            EVFQVGW+PKNETILASCCLGRRLMVWDLSRIDEEQTP+DAEDGPPELLFIHGGHTSKIS
Sbjct: 319  EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378

Query: 300  DFSWNPCEPWVVASVAEDNILQIWQMAENIYHDEDDLPGDD 178
            DFSWNPCE WVVASVAEDNILQIWQMAENIYHDEDDLPGDD
Sbjct: 379  DFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDD 419


>ref|XP_002265142.1| PREDICTED: WD-40 repeat-containing protein MSI1 [Vitis vinifera]
          Length = 424

 Score =  791 bits (2043), Expect = 0.0
 Identities = 367/406 (90%), Positives = 390/406 (96%)
 Frame = -1

Query: 1380 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEQPGKDYSVQKMILGTHTSEDEPN 1201
            EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREE PGKDYSVQKMILGTHTSE+EPN
Sbjct: 19   EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78

Query: 1200 YLMLAQVQLPLEDAENDARQYDDDRADLGGFGAANAKVQILQQIHHDGEVNRARYMPQNP 1021
            YLMLAQVQLPLEDAENDARQYDDDR D+GGFG AN KVQI+QQI+HDGEVNRARYMPQN 
Sbjct: 79   YLMLAQVQLPLEDAENDARQYDDDRFDVGGFGCANGKVQIIQQINHDGEVNRARYMPQNS 138

Query: 1020 FLIATKTVSAEVYLFDYSKHPSKPPADGTCNPDLRLRGHNTEGYGLSWSQFKQGHLLSGS 841
            F+IATKTVSAEVY+FDYSKHPSKPP DG C+PDLRLRGH+TEGYGLSWSQFKQGHLLSGS
Sbjct: 139  FIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSQFKQGHLLSGS 198

Query: 840  DDSQICLWDINASPKNKALDAMQIFKIHRGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 661
            DD+QICLWDINA+PKNKAL+A QIFK+H GVVEDVAWHLRHEYLFGSVGDDQYL IWDLR
Sbjct: 199  DDAQICLWDINATPKNKALEAQQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258

Query: 660  TPSVTKPVQSVVAHQSEVNCLAFNPFNEWIVATGSTDKTVKLFDLRNINNALHTFDSHKD 481
            TPSV+KP+QSV+AHQSEVNCLAFNPFNEW+VATGSTDKTVKLFDLR IN ALHTFD HK+
Sbjct: 259  TPSVSKPIQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKINTALHTFDCHKE 318

Query: 480  EVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAEDGPPELLFIHGGHTSKIS 301
            EVFQVGW+PKNETILASCCLGRRLMVWDLSRIDEEQTP+DAEDGPPELLFIHGGHTSKIS
Sbjct: 319  EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378

Query: 300  DFSWNPCEPWVVASVAEDNILQIWQMAENIYHDEDDLPGDDMGRAS 163
            DFSWNPCE WV+ASVAEDNILQIWQMAENIYHDEDDLPG++  +AS
Sbjct: 379  DFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGEESTKAS 424


>ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ricinus communis]
            gi|223534193|gb|EEF35909.1| retinoblastoma-binding
            protein, putative [Ricinus communis]
          Length = 424

 Score =  790 bits (2041), Expect = 0.0
 Identities = 365/406 (89%), Positives = 390/406 (96%)
 Frame = -1

Query: 1380 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEQPGKDYSVQKMILGTHTSEDEPN 1201
            EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREE P KDYSVQKMILGTHTSE+EPN
Sbjct: 19   EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPDKDYSVQKMILGTHTSENEPN 78

Query: 1200 YLMLAQVQLPLEDAENDARQYDDDRADLGGFGAANAKVQILQQIHHDGEVNRARYMPQNP 1021
            YLMLAQVQLPL+DAENDAR YDDDR+D+GGFGAAN KVQI+QQI+HDGEVNRARYMPQNP
Sbjct: 79   YLMLAQVQLPLDDAENDARHYDDDRSDMGGFGAANGKVQIIQQINHDGEVNRARYMPQNP 138

Query: 1020 FLIATKTVSAEVYLFDYSKHPSKPPADGTCNPDLRLRGHNTEGYGLSWSQFKQGHLLSGS 841
            F+IATKTVSAEVYLFDYSKHPSKPP DG C+PDLRLRGH+TEGYGLSWS+FKQGHLLSGS
Sbjct: 139  FIIATKTVSAEVYLFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKQGHLLSGS 198

Query: 840  DDSQICLWDINASPKNKALDAMQIFKIHRGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 661
            DD+QICLWDIN++PKNK+LDA QIFK+H GVVEDVAWHLRHEYLFGSVGDDQYL IWDLR
Sbjct: 199  DDAQICLWDINSTPKNKSLDAFQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258

Query: 660  TPSVTKPVQSVVAHQSEVNCLAFNPFNEWIVATGSTDKTVKLFDLRNINNALHTFDSHKD 481
            TPSV+KPVQSVVAHQSEVNCLAFNPFNEW+VATGSTDKTVKLFD+R IN ALHTFD HK+
Sbjct: 259  TPSVSKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKE 318

Query: 480  EVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAEDGPPELLFIHGGHTSKIS 301
            EVFQVGW+PKNETILASCCLGRRLMVWDLSRIDEEQTP+DAEDGPPELLFIHGGHTSKIS
Sbjct: 319  EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378

Query: 300  DFSWNPCEPWVVASVAEDNILQIWQMAENIYHDEDDLPGDDMGRAS 163
            DFSWNPCE WV+ASVAEDNILQIWQMAENIYHDEDD+PGD+  + S
Sbjct: 379  DFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDIPGDESNKGS 424


>ref|XP_004133950.1| PREDICTED: WD-40 repeat-containing protein MSI1-like [Cucumis
            sativus] gi|449515418|ref|XP_004164746.1| PREDICTED:
            WD-40 repeat-containing protein MSI1-like [Cucumis
            sativus]
          Length = 423

 Score =  786 bits (2030), Expect = 0.0
 Identities = 365/398 (91%), Positives = 383/398 (96%)
 Frame = -1

Query: 1380 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEQPGKDYSVQKMILGTHTSEDEPN 1201
            EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREE PGKDYSVQKMILGTHTSE+EPN
Sbjct: 19   EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78

Query: 1200 YLMLAQVQLPLEDAENDARQYDDDRADLGGFGAANAKVQILQQIHHDGEVNRARYMPQNP 1021
            YLMLAQVQLPLED+ENDAR YDDDRAD GGFG AN KVQI+QQI+HDGEVNRARYMPQNP
Sbjct: 79   YLMLAQVQLPLEDSENDARHYDDDRADAGGFGCANGKVQIIQQINHDGEVNRARYMPQNP 138

Query: 1020 FLIATKTVSAEVYLFDYSKHPSKPPADGTCNPDLRLRGHNTEGYGLSWSQFKQGHLLSGS 841
            F+IATKTVSAEV++FDYSKHPSKPP DGTCNPDLRLRGHNTEGYGLSWS+FKQGHLLSGS
Sbjct: 139  FIIATKTVSAEVFVFDYSKHPSKPPLDGTCNPDLRLRGHNTEGYGLSWSKFKQGHLLSGS 198

Query: 840  DDSQICLWDINASPKNKALDAMQIFKIHRGVVEDVAWHLRHEYLFGSVGDDQYLHIWDLR 661
            DD+QICLWDINA+PKNK L+AMQIFK+H GVVEDVAWHLRHEYLFGSVGDDQYL +WDLR
Sbjct: 199  DDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLVWDLR 258

Query: 660  TPSVTKPVQSVVAHQSEVNCLAFNPFNEWIVATGSTDKTVKLFDLRNINNALHTFDSHKD 481
            TPS  KPVQSVVAHQSEVNCLAFNPFNEW+VATGSTDKTVKLFDLR I+ ALHTFD HK+
Sbjct: 259  TPSANKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTFDCHKE 318

Query: 480  EVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPDDAEDGPPELLFIHGGHTSKIS 301
            EVFQVGW+PKNETILASCCLGRRLMVWDLSRIDEEQTP+DAEDGPPELLFIHGGHTSKIS
Sbjct: 319  EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378

Query: 300  DFSWNPCEPWVVASVAEDNILQIWQMAENIYHDEDDLP 187
            DFSWNPCE WVVASVAEDNILQIWQMAENIYHDEDDLP
Sbjct: 379  DFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLP 416


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