BLASTX nr result

ID: Bupleurum21_contig00008678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008678
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266268.1| PREDICTED: cytosolic Fe-S cluster assembly f...   617   e-174
ref|XP_002298588.1| predicted protein [Populus trichocarpa] gi|2...   601   e-169
ref|XP_003588988.1| Cytosolic Fe-S cluster assembly factor nbp35...   592   e-167
ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinu...   592   e-167
gb|ACJ85299.1| unknown [Medicago truncatula]                          591   e-166

>ref|XP_002266268.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-like [Vitis
            vinifera]
          Length = 353

 Score =  617 bits (1592), Expect = e-174
 Identities = 301/340 (88%), Positives = 322/340 (94%)
 Frame = -1

Query: 1245 IPEDANEHCPGPQSDSAGKSDACAGCPNQDACASAPKGPDPDLVAIAERMATVKHKILVL 1066
            IPE+ANEHCPGPQS+SAG+SDAC GCPNQ+ACA+APKGPDPDLVAIAERMATVK KILVL
Sbjct: 9    IPENANEHCPGPQSESAGQSDACQGCPNQEACATAPKGPDPDLVAIAERMATVKRKILVL 68

Query: 1065 SGKGGVGKSTFSAQLSYALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 886
            SGKGGVGKSTFSAQLS+ALAAMDFQVGLLDIDICGPSIPKMLGLEGQ+IHQSNLGWSPVY
Sbjct: 69   SGKGGVGKSTFSAQLSFALAAMDFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVY 128

Query: 885  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 706
            VESNLGVMSIGFMLPNPD+AVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI
Sbjct: 129  VESNLGVMSIGFMLPNPDEAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 188

Query: 705  SIVQFLLETGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGIEVLGVVENMSGLSQSVPSFK 526
            SIVQFL  TGIDGAIIVTTPQQVSLIDVRKEVSFCKKVG+EVLGVVENMSGL Q V  F+
Sbjct: 189  SIVQFLQGTGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGVEVLGVVENMSGLCQPVTDFR 248

Query: 525  FSRMTKIGEQEDVTEWAINLMKEKAPELLNLVACSEVFDTSGGGAAKMCVDMGVPFLGKV 346
            F+R+T+ GEQ+DVTEW I  M+EKAPE+LNLVACSEVFD+S GGAAKMC +M VPFLGKV
Sbjct: 249  FTRVTETGEQKDVTEWVIEYMREKAPEMLNLVACSEVFDSSSGGAAKMCKEMNVPFLGKV 308

Query: 345  PLDPQLCKAAEEGRSCFADSKCTASAPALKRIIEKLVATK 226
            PLDPQLCKAAEEGRSCFAD+KC  SAPAL+RIIEKLVA +
Sbjct: 309  PLDPQLCKAAEEGRSCFADTKCGVSAPALQRIIEKLVANQ 348


>ref|XP_002298588.1| predicted protein [Populus trichocarpa] gi|222845846|gb|EEE83393.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  601 bits (1550), Expect = e-169
 Identities = 290/337 (86%), Positives = 314/337 (93%)
 Frame = -1

Query: 1245 IPEDANEHCPGPQSDSAGKSDACAGCPNQDACASAPKGPDPDLVAIAERMATVKHKILVL 1066
            IPE+ANEHCPGPQSDSAGKSD+C GCPNQ  CA+APKGPDPDLVAIAERMATVKHKILVL
Sbjct: 6    IPENANEHCPGPQSDSAGKSDSCQGCPNQQDCATAPKGPDPDLVAIAERMATVKHKILVL 65

Query: 1065 SGKGGVGKSTFSAQLSYALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 886
            SGKGGVGKSTFSAQLSYALAAMDFQVGL+DIDICGPSIPKMLGLEGQEIHQSNLGWSPVY
Sbjct: 66   SGKGGVGKSTFSAQLSYALAAMDFQVGLMDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 125

Query: 885  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 706
            VESNLGVMSIGFMLPNPD+AVIWRGPRKNG+IKQFLKDVYWGELDFLVVDAPPGTSDEHI
Sbjct: 126  VESNLGVMSIGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLVVDAPPGTSDEHI 185

Query: 705  SIVQFLLETGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGIEVLGVVENMSGLSQSVPSFK 526
            SIVQ+L  TGIDGAIIVTTPQQVSLIDVRKEVSFCKKVG+EVLGVVENMSGL Q +  F+
Sbjct: 186  SIVQYLQATGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGVEVLGVVENMSGLCQRLTDFR 245

Query: 525  FSRMTKIGEQEDVTEWAINLMKEKAPELLNLVACSEVFDTSGGGAAKMCVDMGVPFLGKV 346
            F+++ + GEQ D+TE  +  M+EKAPE+L+L+ACSEVFD+SGGGA +MC +MGVPFLGKV
Sbjct: 246  FAKLMENGEQNDITERVLGYMREKAPEMLDLIACSEVFDSSGGGATQMCQEMGVPFLGKV 305

Query: 345  PLDPQLCKAAEEGRSCFADSKCTASAPALKRIIEKLV 235
            PLDPQLCKAAEEGRSCFAD KC  SAP LK IIEKL+
Sbjct: 306  PLDPQLCKAAEEGRSCFADQKCGVSAPVLKSIIEKLL 342


>ref|XP_003588988.1| Cytosolic Fe-S cluster assembly factor nbp35 [Medicago truncatula]
            gi|355478036|gb|AES59239.1| Cytosolic Fe-S cluster
            assembly factor nbp35 [Medicago truncatula]
          Length = 355

 Score =  592 bits (1527), Expect = e-167
 Identities = 285/339 (84%), Positives = 311/339 (91%)
 Frame = -1

Query: 1245 IPEDANEHCPGPQSDSAGKSDACAGCPNQDACASAPKGPDPDLVAIAERMATVKHKILVL 1066
            IPEDANEHCPGPQSDSAGKSDAC GCPNQ  CA+APKGPDPD+VAIAERMATVKHKILVL
Sbjct: 6    IPEDANEHCPGPQSDSAGKSDACEGCPNQQICATAPKGPDPDMVAIAERMATVKHKILVL 65

Query: 1065 SGKGGVGKSTFSAQLSYALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 886
            SGKGGVGKSTFSAQL++ALAA DFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY
Sbjct: 66   SGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 125

Query: 885  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 706
            VESNLGVMSIGFMLP+PD+AVIWRGPRKNG+IKQFLKDVYWGELDFL+VDAPPGTSDEHI
Sbjct: 126  VESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHI 185

Query: 705  SIVQFLLETGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGIEVLGVVENMSGLSQSVPSFK 526
            SIVQ L    +DGAIIVTTPQQVSLIDV+KEV+FCKKVG++VLGVVENMSGLSQ + + K
Sbjct: 186  SIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLSQPISNLK 245

Query: 525  FSRMTKIGEQEDVTEWAINLMKEKAPELLNLVACSEVFDTSGGGAAKMCVDMGVPFLGKV 346
            F ++T  GE +DVTEW    MKEKAPE+LNL+ACSEVFD+SGGGA KMC +M VPFLGKV
Sbjct: 246  FMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSEVFDSSGGGALKMCNEMAVPFLGKV 305

Query: 345  PLDPQLCKAAEEGRSCFADSKCTASAPALKRIIEKLVAT 229
            PLDPQLCKAAEEGRSCFAD  C  SAPAL++II+KL+ T
Sbjct: 306  PLDPQLCKAAEEGRSCFADKDCVVSAPALQKIIDKLMET 344


>ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinus communis]
            gi|223549472|gb|EEF50960.1| nucleotide-binding protein,
            putative [Ricinus communis]
          Length = 347

 Score =  592 bits (1526), Expect = e-167
 Identities = 288/337 (85%), Positives = 314/337 (93%)
 Frame = -1

Query: 1245 IPEDANEHCPGPQSDSAGKSDACAGCPNQDACASAPKGPDPDLVAIAERMATVKHKILVL 1066
            IPEDANE+CPGPQS++AGKSDAC GCPNQ+ACASAPKGPDPDLVAIAERMATVKHKILVL
Sbjct: 6    IPEDANENCPGPQSETAGKSDACQGCPNQEACASAPKGPDPDLVAIAERMATVKHKILVL 65

Query: 1065 SGKGGVGKSTFSAQLSYALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 886
            SGKGGVGKSTFSAQLS+ALAAMDFQVGL+DIDICGPSIPKML  +GQ+IHQS+LGWSPVY
Sbjct: 66   SGKGGVGKSTFSAQLSFALAAMDFQVGLMDIDICGPSIPKMLA-DGQDIHQSSLGWSPVY 124

Query: 885  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 706
            VESNLGVMSIGFMLPNPDDAVIWRGPRKNG+IKQFLKDVYWGELDFLVVDAPPGTSDEHI
Sbjct: 125  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVYWGELDFLVVDAPPGTSDEHI 184

Query: 705  SIVQFLLETGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGIEVLGVVENMSGLSQSVPSFK 526
            SIVQFL  TGIDGAIIVTTPQQVSLIDVRKEVSFCKKVG+EVLGVVENMSGL Q +  F+
Sbjct: 185  SIVQFLQATGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGLEVLGVVENMSGLCQPLTDFR 244

Query: 525  FSRMTKIGEQEDVTEWAINLMKEKAPELLNLVACSEVFDTSGGGAAKMCVDMGVPFLGKV 346
            F ++++ GEQEDVTE  +  M+EKAPE+L L+A SE+FD+SGGGA +MC DMGVPFLGKV
Sbjct: 245  FMKLSETGEQEDVTEKVLEYMREKAPEMLGLIASSEIFDSSGGGATQMCRDMGVPFLGKV 304

Query: 345  PLDPQLCKAAEEGRSCFADSKCTASAPALKRIIEKLV 235
            PLDPQLCKAAEEGRSCFAD KC  SAPALK +IEKL+
Sbjct: 305  PLDPQLCKAAEEGRSCFADQKCGVSAPALKSVIEKLL 341


>gb|ACJ85299.1| unknown [Medicago truncatula]
          Length = 355

 Score =  591 bits (1523), Expect = e-166
 Identities = 284/339 (83%), Positives = 311/339 (91%)
 Frame = -1

Query: 1245 IPEDANEHCPGPQSDSAGKSDACAGCPNQDACASAPKGPDPDLVAIAERMATVKHKILVL 1066
            IPEDANEHCPGPQSDSAGKSDAC GCPNQ  CA+APKGPDPD+VAIAERMATVKHKILVL
Sbjct: 6    IPEDANEHCPGPQSDSAGKSDACEGCPNQQICATAPKGPDPDMVAIAERMATVKHKILVL 65

Query: 1065 SGKGGVGKSTFSAQLSYALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 886
            SGKGGVGKSTFSAQL++ALAA DFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY
Sbjct: 66   SGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVY 125

Query: 885  VESNLGVMSIGFMLPNPDDAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAPPGTSDEHI 706
            VESNLGVMSIGFMLP+PD+AVIWRGPRKNG+IKQFLKDVYWGELDFL+VDAPPGTSDEHI
Sbjct: 126  VESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHI 185

Query: 705  SIVQFLLETGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGIEVLGVVENMSGLSQSVPSFK 526
            SIVQ L    +DGAIIVTTPQQVSLIDV+KEV+FCKKVG++VLGVVENMSGLSQ + + K
Sbjct: 186  SIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLSQPISNLK 245

Query: 525  FSRMTKIGEQEDVTEWAINLMKEKAPELLNLVACSEVFDTSGGGAAKMCVDMGVPFLGKV 346
            F ++T  GE +DVTEW    MKEKAPE+LNL+ACSEVFD+SGGGA K+C +M VPFLGKV
Sbjct: 246  FMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSEVFDSSGGGALKVCNEMAVPFLGKV 305

Query: 345  PLDPQLCKAAEEGRSCFADSKCTASAPALKRIIEKLVAT 229
            PLDPQLCKAAEEGRSCFAD  C  SAPAL++II+KL+ T
Sbjct: 306  PLDPQLCKAAEEGRSCFADKDCVVSAPALQKIIDKLMET 344


Top