BLASTX nr result

ID: Bupleurum21_contig00008664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008664
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160217.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   478   e-132
ref|XP_004138352.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   478   e-132
ref|XP_002265320.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   478   e-132
ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricin...   472   e-130
ref|XP_003555520.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   471   e-130

>ref|XP_004160217.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
            isoform 1 [Cucumis sativus]
            gi|449496753|ref|XP_004160218.1| PREDICTED: protein
            TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform
            2 [Cucumis sativus]
          Length = 351

 Score =  478 bits (1231), Expect = e-132
 Identities = 253/354 (71%), Positives = 287/354 (81%), Gaps = 2/354 (0%)
 Frame = +3

Query: 12   MQAACCFHPVSLFPNRSSSLDHSGWINLKSPKSSTLY--ITRGIKICKFDGPLRPKRLSA 185
            MQ AC  HP+  F  RS S    GW N+++  S      +    ++ KF   L   RL A
Sbjct: 1    MQIACQPHPLVYFSVRSISKRQDGWKNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 186  SAIPNTNDGHPCPSVSEEHTNTSEMLHRKAETWFSEWSPPKYLWRALSVFVLAGQVVSRT 365
              IPN  DG P  S+SE+  N++ +L   A   +++WSPPKYLWR LSV  L GQV+ RT
Sbjct: 61   --IPNAEDGDPSASMSED-INSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRT 117

Query: 366  YKGKIHWKNTLEQLERVGPRSVGVCLLTATFVGMAFAIQFVREFTRLGLNRSIGGVLALA 545
             KGK+HWKNTL+QLERVGPRSVGVCLLT+ FVGMAF IQFVREFTRLGLNRS+GGVLALA
Sbjct: 118  LKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALA 177

Query: 546  FARELSPVITSIVIAGRIGSAFAAELGTMQVSEQTDTLRVLGADPVDYMVTPRVIASCIT 725
            F+RELSPVITSIV+AGRIGS++AAELGTMQVSEQTDTLRVLG++PVDY+VTPRVIASCI 
Sbjct: 178  FSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIA 237

Query: 726  LPLLTLLCFTVGMASSALLADGVYGISINIILDSAQRALSSWDIISAMLKAQVFGLIISI 905
            LP+LTL+CFTVGMASSALLAD VYG+SINIILDSA RAL SWDIISAM+K+QVFG IISI
Sbjct: 238  LPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISI 297

Query: 906  VSCGWGITTSEGAKGVGESTTSAVVISLVGIFIADFILSYFFFMGAGNSLKNCI 1067
            VSC WGITTS GAKGVGESTTSAVVISLVGIFIADF LS FFF GAG+SLKNC+
Sbjct: 298  VSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351


>ref|XP_004138352.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
            isoform 1 [Cucumis sativus]
            gi|449441163|ref|XP_004138353.1| PREDICTED: protein
            TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform
            2 [Cucumis sativus]
          Length = 351

 Score =  478 bits (1231), Expect = e-132
 Identities = 253/354 (71%), Positives = 287/354 (81%), Gaps = 2/354 (0%)
 Frame = +3

Query: 12   MQAACCFHPVSLFPNRSSSLDHSGWINLKSPKSSTLY--ITRGIKICKFDGPLRPKRLSA 185
            MQ AC  HP+  F  RS S    GW N+++  S      +    ++ KF   L   RL A
Sbjct: 1    MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 186  SAIPNTNDGHPCPSVSEEHTNTSEMLHRKAETWFSEWSPPKYLWRALSVFVLAGQVVSRT 365
              IPN  DG P  S+SE+  N++ +L   A   +++WSPPKYLWR LSV  L GQV+ RT
Sbjct: 61   --IPNAEDGDPSASMSED-INSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRT 117

Query: 366  YKGKIHWKNTLEQLERVGPRSVGVCLLTATFVGMAFAIQFVREFTRLGLNRSIGGVLALA 545
             KGK+HWKNTL+QLERVGPRSVGVCLLT+ FVGMAF IQFVREFTRLGLNRS+GGVLALA
Sbjct: 118  LKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALA 177

Query: 546  FARELSPVITSIVIAGRIGSAFAAELGTMQVSEQTDTLRVLGADPVDYMVTPRVIASCIT 725
            F+RELSPVITSIV+AGRIGS++AAELGTMQVSEQTDTLRVLG++PVDY+VTPRVIASCI 
Sbjct: 178  FSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIA 237

Query: 726  LPLLTLLCFTVGMASSALLADGVYGISINIILDSAQRALSSWDIISAMLKAQVFGLIISI 905
            LP+LTL+CFTVGMASSALLAD VYG+SINIILDSA RAL SWDIISAM+K+QVFG IISI
Sbjct: 238  LPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISI 297

Query: 906  VSCGWGITTSEGAKGVGESTTSAVVISLVGIFIADFILSYFFFMGAGNSLKNCI 1067
            VSC WGITTS GAKGVGESTTSAVVISLVGIFIADF LS FFF GAG+SLKNC+
Sbjct: 298  VSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351


>ref|XP_002265320.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
            [Vitis vinifera]
          Length = 478

 Score =  478 bits (1231), Expect = e-132
 Identities = 245/347 (70%), Positives = 286/347 (82%), Gaps = 4/347 (1%)
 Frame = +3

Query: 39   VSLFPNRSSSLDHSGWINLK----SPKSSTLYITRGIKICKFDGPLRPKRLSASAIPNTN 206
            +  F  R++ +D  GW+ +K    SP    +  T   + CKF  P++  RL +  IP+ +
Sbjct: 136  IKAFYQRANKVD--GWMKMKTSNLSPFLGRVSFTGKSQTCKFHIPVQRTRLFS--IPSAD 191

Query: 207  DGHPCPSVSEEHTNTSEMLHRKAETWFSEWSPPKYLWRALSVFVLAGQVVSRTYKGKIHW 386
            DGHP  SVSEE+++T+   + + E+  S+WSPP+YLWR LSVF++AGQV+ R   GK+HW
Sbjct: 192  DGHPSVSVSEENSDTNHAFNHEEESLLSKWSPPRYLWRGLSVFIMAGQVIIRILTGKVHW 251

Query: 387  KNTLEQLERVGPRSVGVCLLTATFVGMAFAIQFVREFTRLGLNRSIGGVLALAFARELSP 566
             NTL+QLERVGPRSVGVC+LTA FVGMAF IQFVREFTRLGLNRS+GGVLALAF+RELSP
Sbjct: 252  VNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSP 311

Query: 567  VITSIVIAGRIGSAFAAELGTMQVSEQTDTLRVLGADPVDYMVTPRVIASCITLPLLTLL 746
            V+TSIV+AGRIGSAFAAELGTMQVSEQTDTLRVLG +PVDY+VTPRVIASCI LP LTLL
Sbjct: 312  VVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVIASCIALPFLTLL 371

Query: 747  CFTVGMASSALLADGVYGISINIILDSAQRALSSWDIISAMLKAQVFGLIISIVSCGWGI 926
            CFTVGMASSALLAD VYGISINIILDSAQRAL+SWDIISAM+K+  FG IIS VSC WG+
Sbjct: 372  CFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAMIKSVAFGGIISTVSCAWGV 431

Query: 927  TTSEGAKGVGESTTSAVVISLVGIFIADFILSYFFFMGAGNSLKNCI 1067
            TT  GAKGVGESTTSAVVISLVGIFIADF LSY FF GAG++LKNC+
Sbjct: 432  TTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQGAGDALKNCV 478


>ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis]
            gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE,
            putative [Ricinus communis]
          Length = 350

 Score =  472 bits (1214), Expect = e-130
 Identities = 242/359 (67%), Positives = 282/359 (78%), Gaps = 7/359 (1%)
 Frame = +3

Query: 12   MQAACCFHPVSLFPNRSSSLDHSGWINLKSPKSSTLYITRGIKICKFDGPLRPKRLSAS- 188
            MQ A   H      NR S +  +GW+ +K   SS L          F G     RL ++ 
Sbjct: 1    MQTASHLHSGFYISNRRSYVKPNGWMEIKGVNSSQL---------SFSGLAHNHRLLSTE 51

Query: 189  ------AIPNTNDGHPCPSVSEEHTNTSEMLHRKAETWFSEWSPPKYLWRALSVFVLAGQ 350
                   IPN NDGHP  ++ +E  N++     +AET+ S+WSPP YLWR LSV V+AGQ
Sbjct: 52   QQTKLFVIPNANDGHPSVTLLDEEPNSNHAPSSEAETFLSKWSPPGYLWRGLSVLVVAGQ 111

Query: 351  VVSRTYKGKIHWKNTLEQLERVGPRSVGVCLLTATFVGMAFAIQFVREFTRLGLNRSIGG 530
            V+ R  KGK+HW+NTL+QLERVGP+SVGVCLLT+ FVGMAF IQFVREFT+LGL RS+GG
Sbjct: 112  VIIRILKGKVHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLGLQRSVGG 171

Query: 531  VLALAFARELSPVITSIVIAGRIGSAFAAELGTMQVSEQTDTLRVLGADPVDYMVTPRVI 710
            VLALAF+RELSPV+TSIV+AGRIGSA+AAELGTMQVSEQTDTLRVLG +PVDY+VTPRVI
Sbjct: 172  VLALAFSRELSPVVTSIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVI 231

Query: 711  ASCITLPLLTLLCFTVGMASSALLADGVYGISINIILDSAQRALSSWDIISAMLKAQVFG 890
            ASC+ LPLLTL+CFTVG+ASSA+LADGV+G+SINIILDSAQR L SWDIISAM+K+QVFG
Sbjct: 232  ASCVALPLLTLMCFTVGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAMIKSQVFG 291

Query: 891  LIISIVSCGWGITTSEGAKGVGESTTSAVVISLVGIFIADFILSYFFFMGAGNSLKNCI 1067
             IISIVSC WG+TTS GAKGVGESTTSAVVISLVGIFIADF LSY FF G G+SLKN +
Sbjct: 292  AIISIVSCAWGVTTSGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQGVGDSLKNAM 350


>ref|XP_003555520.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
            [Glycine max]
          Length = 356

 Score =  471 bits (1213), Expect = e-130
 Identities = 247/363 (68%), Positives = 287/363 (79%), Gaps = 11/363 (3%)
 Frame = +3

Query: 12   MQAACCFHPVSLFPNRSSSLD--HSGWINLKSPKSSTLYITRGIKICKFDG--------- 158
            MQ     HP+  F  R+ S +    G +  ++P  S L    G K C F+G         
Sbjct: 1    MQTTSYSHPLFCFSCRNISTNGKSKGSVKFRAPYPSQL----GRK-CGFNGRPRVYISPS 55

Query: 159  PLRPKRLSASAIPNTNDGHPCPSVSEEHTNTSEMLHRKAETWFSEWSPPKYLWRALSVFV 338
            P++P RL    + NT D HP     ++  NT+   +  + T+ S WSPP+YLWR LSV +
Sbjct: 56   PIKPNRLYV--LHNTGDNHPSAFSVDDEMNTNHAPNGMSPTFLSNWSPPRYLWRGLSVLI 113

Query: 339  LAGQVVSRTYKGKIHWKNTLEQLERVGPRSVGVCLLTATFVGMAFAIQFVREFTRLGLNR 518
            LAGQVV +T KGKIHW+NTL+QLERVGP+SVGVCLLT+ FVGMAF IQFVREFTRLGLNR
Sbjct: 114  LAGQVVVKTLKGKIHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTRLGLNR 173

Query: 519  SIGGVLALAFARELSPVITSIVIAGRIGSAFAAELGTMQVSEQTDTLRVLGADPVDYMVT 698
            S+GGVLALAF+RELSPV+T+IV+AGRIGSAFAAELGTMQVSEQTDTLRVLG+DPVDY+VT
Sbjct: 174  SVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGSDPVDYLVT 233

Query: 699  PRVIASCITLPLLTLLCFTVGMASSALLADGVYGISINIILDSAQRALSSWDIISAMLKA 878
            PRV+A+CI LPLLTLLCFT+GMASSALLADGVYG+SINII+DSAQRAL SWDIISAM+K+
Sbjct: 234  PRVLATCIALPLLTLLCFTLGMASSALLADGVYGLSINIIMDSAQRALRSWDIISAMIKS 293

Query: 879  QVFGLIISIVSCGWGITTSEGAKGVGESTTSAVVISLVGIFIADFILSYFFFMGAGNSLK 1058
            QVFG IISIVSC WG+TT  GAKGVGESTTSAVVISLVGIFIADF LSY FF GAG+ LK
Sbjct: 294  QVFGAIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVGIFIADFALSYVFFQGAGDQLK 353

Query: 1059 NCI 1067
            NC+
Sbjct: 354  NCV 356


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