BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008652
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   251   9e-65
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              251   9e-65
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   248   8e-64
ref|XP_002532622.1| Far upstream element-binding protein, putati...   242   6e-62
ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Ara...   241   1e-61

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  251 bits (641), Expect = 9e-65
 Identities = 130/193 (67%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   PNSSCXXXXXXXXATIKSFIEESQAGIKISPQDNSYAGISDRLVTVAGTIDEQMRAIDLI 180
           PNSSC        +TIKSFIE+SQA IKISPQDN+Y G++DRLVT+ G+++EQMRAIDLI
Sbjct: 127 PNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLI 186

Query: 181 VSKLSEDTYYVQSMSTPFPYAG-YNAANYGPNRGGAKYPNNRPHSKGPGVLQEDKSNSVT 357
           +SKL+ED +Y Q M+ PF YA  YN+ NYGPN  G K+ NN+          ED+SNSVT
Sbjct: 187 LSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNK----------EDRSNSVT 236

Query: 358 IGVADEHIGLVLGRGGRNIIEISQISGARIKISDRDDFISGTTNRKVTITGSQRAIQVAE 537
           IGVADEHIGLV+GRGGRNI++ISQ SGARIKISDR DF+SGTT+RKVTITGSQRAI+ AE
Sbjct: 237 IGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAE 296

Query: 538 DMIMQKVDSAAEK 576
            MIMQKV SA+E+
Sbjct: 297 SMIMQKVASASER 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  251 bits (641), Expect = 9e-65
 Identities = 130/193 (67%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   PNSSCXXXXXXXXATIKSFIEESQAGIKISPQDNSYAGISDRLVTVAGTIDEQMRAIDLI 180
           PNSSC        +TIKSFIE+SQA IKISPQDN+Y G++DRLVT+ G+++EQMRAIDLI
Sbjct: 175 PNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLI 234

Query: 181 VSKLSEDTYYVQSMSTPFPYAG-YNAANYGPNRGGAKYPNNRPHSKGPGVLQEDKSNSVT 357
           +SKL+ED +Y Q M+ PF YA  YN+ NYGPN  G K+ NN+          ED+SNSVT
Sbjct: 235 LSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNK----------EDRSNSVT 284

Query: 358 IGVADEHIGLVLGRGGRNIIEISQISGARIKISDRDDFISGTTNRKVTITGSQRAIQVAE 537
           IGVADEHIGLV+GRGGRNI++ISQ SGARIKISDR DF+SGTT+RKVTITGSQRAI+ AE
Sbjct: 285 IGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAE 344

Query: 538 DMIMQKVDSAAEK 576
            MIMQKV SA+E+
Sbjct: 345 SMIMQKVASASER 357


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
           gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
           protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  248 bits (633), Expect = 8e-64
 Identities = 127/195 (65%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   PNSSCXXXXXXXXATIKSFIEESQAGIKISPQDNSYAGISDRLVTVAGTIDEQMRAIDLI 180
           P+SSC        +TIKSFIE+SQAGIKISPQDN+Y   +DRLVT++GTI+EQMRA DLI
Sbjct: 128 PHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLI 187

Query: 181 VSKLSEDTYYVQSMSTPFPY-AGYNAANYGPNRGGA--KYPNNRPHSKGPGVLQEDKSNS 351
           VSKLSED +Y QSM+ PF Y   +NA NYG N GG   ++ NN+P ++   ++QE+++NS
Sbjct: 188 VSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEERNNS 247

Query: 352 VTIGVADEHIGLVLGRGGRNIIEISQISGARIKISDRDDFISGTTNRKVTITGSQRAIQV 531
           +TIGV+D HIGLV+GRGGRNI+EISQ SGARIKISDR DF+SGTT+RKVTITGSQRAI+ 
Sbjct: 248 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 307

Query: 532 AEDMIMQKVDSAAEK 576
           AE MI+QKV  A+E+
Sbjct: 308 AESMILQKVAYASER 322


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score =  242 bits (617), Expect = 6e-62
 Identities = 126/193 (65%), Positives = 151/193 (78%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   PNSSCXXXXXXXXATIKSFIEESQAGIKISPQDNSYAGISDRLVTVAGTIDEQMRAIDLI 180
           PNSSC        + IKSFIEESQAGIKISPQDN++ G++DRLVTV GT++EQMRAIDLI
Sbjct: 129 PNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLI 188

Query: 181 VSKLSEDTYYVQSMSTPFPYA-GYNAANYGPNRGGAKYPNNRPHSKGPGVLQEDKSNSVT 357
           +SKL +D +YVQ+M  PF YA  YN+ NYG N  G K+ NN+          ED++NSVT
Sbjct: 189 LSKLYDDPHYVQTMHAPFSYAVAYNSMNYGANGAGGKFQNNK----------EDRTNSVT 238

Query: 358 IGVADEHIGLVLGRGGRNIIEISQISGARIKISDRDDFISGTTNRKVTITGSQRAIQVAE 537
           IGVAD HIGLV+GRGGRNI+EISQ+SGARIKISDR DF+SGT +RK+ ITGSQRAI+ AE
Sbjct: 239 IGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAE 298

Query: 538 DMIMQKVDSAAEK 576
            MIMQKV  A+E+
Sbjct: 299 GMIMQKVAYASER 311


>ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
           gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
           [Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|21554568|gb|AAM63617.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
           At5g04430/T32M21_30 [Arabidopsis thaliana]
           gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long
           form) protein [Arabidopsis thaliana]
          Length = 313

 Score =  241 bits (614), Expect = 1e-61
 Identities = 126/195 (64%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
 Frame = +1

Query: 1   PNSSCXXXXXXXXATIKSFIEESQAGIKISPQDNSYAGISDRLVTVAGTIDEQMRAIDLI 180
           PNSSC        ATIKSFIEES+AGIKISP DN++ G+SDRLVT++GT +EQMRAIDLI
Sbjct: 128 PNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLI 187

Query: 181 VSKLSEDTYYVQSMSTPFPYA-GYNAANYGPNRGGAKYPNNRPHSKGPGVLQEDKSNSVT 357
           ++KL+ED +Y Q++ +P+ YA GYN+ NY PN  G KY N++          E+ S +VT
Sbjct: 188 LAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHK----------EEASTTVT 237

Query: 358 IGVADEHIGLVLGRGGRNIIEISQISGARIKISDRDDFISGTTNRKVTITGSQRAIQVAE 537
           IGVADEHIGLVLGRGGRNI+EI+Q++GARIKISDR DF+SGTT+RKV+ITG QRAIQ AE
Sbjct: 238 IGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAE 297

Query: 538 DMIMQKVDSAAEK*T 582
            MI QKVDSA E+ T
Sbjct: 298 TMIKQKVDSATERTT 312