BLASTX nr result

ID: Bupleurum21_contig00008649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008649
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29641.3| unnamed protein product [Vitis vinifera]              228   1e-57
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...   227   4e-57
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...   224   3e-56
ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containin...   215   1e-53
ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216...   215   1e-53

>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/154 (72%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
 Frame = -1

Query: 491 KKNQEGQDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDLGPHIR-EADADRP 315
           KK  E ++E NEDDDWEY E GP EIIWQGNEII          KD+  H R E D +RP
Sbjct: 100 KKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEEDTERP 158

Query: 314 TSNPLPPQAEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHIKTGACRFGSR 135
           TSNPLPPQ+EAF+DH NA  IS+QQL  +V++Q+PNFGTEQDK HCPFHIKTGACRFG R
Sbjct: 159 TSNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQR 217

Query: 134 CSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 33
           CSRVHFYPD+SCTLL+KNMYNGPGLAWEQDEGLE
Sbjct: 218 CSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 251


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 857

 Score =  227 bits (578), Expect = 4e-57
 Identities = 109/155 (70%), Positives = 123/155 (79%), Gaps = 6/155 (3%)
 Frame = -1

Query: 479 EGQDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDLGPHIREADA------DR 318
           E ++E N+DDDWEYVEEGP EIIWQGNEII              P  + AD       DR
Sbjct: 123 EKENEFNDDDDWEYVEEGPAEIIWQGNEIIVRKKKI--------PKKKSADQQSRNEDDR 174

Query: 317 PTSNPLPPQAEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHIKTGACRFGS 138
           PTSNPLPPQ+EAFA++Q AP  SA+++LENVAQQ+PNFGTEQDKAHCPFH+KTGACRFG 
Sbjct: 175 PTSNPLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGQ 234

Query: 137 RCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 33
           RCSRVHFYPD++ TLLMKNMYNGPGLAWEQDEGLE
Sbjct: 235 RCSRVHFYPDKANTLLMKNMYNGPGLAWEQDEGLE 269


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score =  224 bits (570), Expect = 3e-56
 Identities = 110/162 (67%), Positives = 124/162 (76%), Gaps = 9/162 (5%)
 Frame = -1

Query: 491 KKNQEGQDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDLGPHIREA------ 330
           KK  E ++E NEDDDWEY E GP EIIWQGNEII          KD+  H R+       
Sbjct: 95  KKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEVLLRLF 153

Query: 329 ---DADRPTSNPLPPQAEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHIKT 159
              D +RPTSNPLPPQ+EAF+DH NA  IS+QQL  +V++Q+PNFGTEQDK HCPFHIKT
Sbjct: 154 QLYDTERPTSNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKT 212

Query: 158 GACRFGSRCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 33
           GACRFG RCSRVHFYPD+SCTLL+KNMYNGPGLAWEQDEGLE
Sbjct: 213 GACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 254


>ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Cucumis sativus]
          Length = 838

 Score =  215 bits (548), Expect = 1e-53
 Identities = 100/152 (65%), Positives = 120/152 (78%)
 Frame = -1

Query: 488 KNQEGQDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDLGPHIREADADRPTS 309
           +  E ++E NE+D WEY+E GP EIIW+G EII          K + P     DA RPTS
Sbjct: 120 REAENENEFNEEDGWEYIE-GPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTS 178

Query: 308 NPLPPQAEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHIKTGACRFGSRCS 129
           NPLPPQ+EAF D++N P IS +Q++E+VA QVPNFGTEQDK+HCPFH+KTGACRFG RCS
Sbjct: 179 NPLPPQSEAFTDYKNTP-ISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCS 237

Query: 128 RVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 33
           R+HFYP++SCTLL+KNMYNGPGLAWEQDEGLE
Sbjct: 238 RIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269


>ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
          Length = 867

 Score =  215 bits (548), Expect = 1e-53
 Identities = 100/152 (65%), Positives = 120/152 (78%)
 Frame = -1

Query: 488 KNQEGQDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDLGPHIREADADRPTS 309
           +  E ++E NE+D WEY+E GP EIIW+G EII          K + P     DA RPTS
Sbjct: 120 REAENENEFNEEDGWEYIE-GPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTS 178

Query: 308 NPLPPQAEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHIKTGACRFGSRCS 129
           NPLPPQ+EAF D++N P IS +Q++E+VA QVPNFGTEQDK+HCPFH+KTGACRFG RCS
Sbjct: 179 NPLPPQSEAFTDYKNTP-ISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCS 237

Query: 128 RVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 33
           R+HFYP++SCTLL+KNMYNGPGLAWEQDEGLE
Sbjct: 238 RIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269


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