BLASTX nr result

ID: Bupleurum21_contig00008588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008588
         (1825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40185.3| unnamed protein product [Vitis vinifera]              772   0.0  
ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   758   0.0  
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a...   742   0.0  
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...   741   0.0  
ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2...   739   0.0  

>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  772 bits (1993), Expect = 0.0
 Identities = 386/537 (71%), Positives = 434/537 (80%)
 Frame = -2

Query: 1788 MAVEQENGDPIKIRPNNXXXXXXXXXIKAKKYLRGEAANLEVLKDKKLKGHLAAREKLYG 1609
            M VEQENG P ++ P +         +K KKYLRGE ANLE L+DKKLKG L  RE+LYG
Sbjct: 1    MGVEQENGTPTEMVPASEQDISDELDVKVKKYLRGEGANLEALQDKKLKGQLVIREELYG 60

Query: 1608 TSAVAAAKAEKWLMPTEGGYLEPEGIEKTWRIKQESIASEVDISSSKNQFDIVLPELGPY 1429
             SA AAAKAEKWLMP+EGGYLE EGIEKTWRIKQESIA EVDI SSKNQ+DIVLPELGPY
Sbjct: 61   KSAKAAAKAEKWLMPSEGGYLEAEGIEKTWRIKQESIAREVDILSSKNQYDIVLPELGPY 120

Query: 1428 SLDFTSSGRYMALAGRKGHLALIDVKSMDLMKEIQVQETIRDVVFLHNELFLAAAQKKYT 1249
            +LDFTSSGRYMA+ GRKGHLA+ID+K+M ++K+ QV+ET+RDVVFLHNELF AAAQKKY 
Sbjct: 121  TLDFTSSGRYMAVGGRKGHLAIIDMKNMGVIKDFQVRETVRDVVFLHNELFFAAAQKKYP 180

Query: 1248 YIYNRVGTELHCLKEHGPVLKLQFLKNHFLLASMNKYGQLRYQDVTTGVMAGCHRTGQGR 1069
            YIYNR GTELHCLKEHG VLKLQFLKNHFLLAS+NK+GQL YQDVT G M G +RTG GR
Sbjct: 181  YIYNRDGTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGR 240

Query: 1068 CDVMHVNPFNGVIASGHSNGTVNMWKPTSGAPLVKMLCHQGPVTALAFHLNGHLMATAGL 889
              VM VNPFNGV+  GHS G V MWKPTS APLVKMLCH GP++ALAFH NGHLMATAG+
Sbjct: 241  TAVMQVNPFNGVVGLGHSGGIVTMWKPTSSAPLVKMLCHHGPISALAFHPNGHLMATAGM 300

Query: 888  DKKIKLWDLRKFEVLQQLPGHAKTLNFSQKGLLAAATGSSVQVLGDLNGSNKYHRYMNHS 709
            DKKIKLWDLRKFEVLQ LPGHAKTL+FSQKGLLA  TGS VQ+LGD +G+  Y RYM HS
Sbjct: 301  DKKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLATGTGSFVQILGDFSGTENYSRYMGHS 360

Query: 708  MAKGFQIQEVAFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPYETSRQRREKEIR 529
            MAKG+QI +V FRPYEDVL IGHSMGWS ILIPG+GEPNFDSWVANP+ETS+QRREKE+ 
Sbjct: 361  MAKGYQIGKVLFRPYEDVLSIGHSMGWSCILIPGSGEPNFDSWVANPFETSKQRREKEVH 420

Query: 528  SLLDKLPPESVMLDPSKIGTVRPIKKKSKPTKQERESELEAAVAAAKSIXXXXXXXXXXX 349
            SLLDKLPPE++MLDP+KIGTVR  +K+ KPTKQER++E+EAAV  AKSI           
Sbjct: 421  SLLDKLPPETIMLDPTKIGTVRQSRKREKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNK 480

Query: 348  XXXXXXXKYEAVDRAKRPFMETQVEDEKSLNKKAKTENVENNLPKSLQRFARNKPAT 178
                   + EAV RAK+PF+E Q+E+E    KK K    E  LPKSLQRFAR K  T
Sbjct: 481  PSKKVKKREEAVARAKKPFLERQMEEENLSTKKQKISG-EIELPKSLQRFARKKATT 536


>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
            [Vitis vinifera]
          Length = 610

 Score =  758 bits (1957), Expect = 0.0
 Identities = 377/510 (73%), Positives = 421/510 (82%)
 Frame = -2

Query: 1707 KAKKYLRGEAANLEVLKDKKLKGHLAAREKLYGTSAVAAAKAEKWLMPTEGGYLEPEGIE 1528
            K KKYLRGE ANLE L+DKKLKG L  RE+LYG SA AAAKAEKWLMP+EGGYLE EGIE
Sbjct: 102  KVKKYLRGEGANLEALQDKKLKGQLVIREELYGKSAKAAAKAEKWLMPSEGGYLEAEGIE 161

Query: 1527 KTWRIKQESIASEVDISSSKNQFDIVLPELGPYSLDFTSSGRYMALAGRKGHLALIDVKS 1348
            KTWRIKQESIA EVDI SSKNQ+DIVLPELGPY+LDFTSSGRYMA+ GRKGHLA+ID+K+
Sbjct: 162  KTWRIKQESIAREVDILSSKNQYDIVLPELGPYTLDFTSSGRYMAVGGRKGHLAIIDMKN 221

Query: 1347 MDLMKEIQVQETIRDVVFLHNELFLAAAQKKYTYIYNRVGTELHCLKEHGPVLKLQFLKN 1168
            M ++K+ QV+ET+RDVVFLHNELF AAAQKKY YIYNR GTELHCLKEHG VLKLQFLKN
Sbjct: 222  MGVIKDFQVRETVRDVVFLHNELFFAAAQKKYPYIYNRDGTELHCLKEHGSVLKLQFLKN 281

Query: 1167 HFLLASMNKYGQLRYQDVTTGVMAGCHRTGQGRCDVMHVNPFNGVIASGHSNGTVNMWKP 988
            HFLLAS+NK+GQL YQDVT G M G +RTG GR  VM VNPFNGV+  GHS G V MWKP
Sbjct: 282  HFLLASINKFGQLHYQDVTMGEMVGNYRTGLGRTAVMQVNPFNGVVGLGHSGGIVTMWKP 341

Query: 987  TSGAPLVKMLCHQGPVTALAFHLNGHLMATAGLDKKIKLWDLRKFEVLQQLPGHAKTLNF 808
            TS APLVKMLCH GP++ALAFH NGHLMATAG+DKKIKLWDLRKFEVLQ LPGHAKTL+F
Sbjct: 342  TSSAPLVKMLCHHGPISALAFHPNGHLMATAGMDKKIKLWDLRKFEVLQTLPGHAKTLDF 401

Query: 807  SQKGLLAAATGSSVQVLGDLNGSNKYHRYMNHSMAKGFQIQEVAFRPYEDVLGIGHSMGW 628
            SQKGLLA  TGS VQ+LGD +G+  Y RYM HSMAKG+QI +V FRPYEDVL IGHSMGW
Sbjct: 402  SQKGLLATGTGSFVQILGDFSGTENYSRYMGHSMAKGYQIGKVLFRPYEDVLSIGHSMGW 461

Query: 627  SSILIPGAGEPNFDSWVANPYETSRQRREKEIRSLLDKLPPESVMLDPSKIGTVRPIKKK 448
            S ILIPG+GEPNFDSWVANP+ETS+QRREKE+ SLLDKLPPE++MLDP+KIGTVR  +K+
Sbjct: 462  SCILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKIGTVRQSRKR 521

Query: 447  SKPTKQERESELEAAVAAAKSIXXXXXXXXXXXXXXXXXXKYEAVDRAKRPFMETQVEDE 268
             KPTKQER++E+EAAV  AKSI                  + EAV RAK+PF+E Q+E+E
Sbjct: 522  EKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLERQMEEE 581

Query: 267  KSLNKKAKTENVENNLPKSLQRFARNKPAT 178
                KK K    E  LPKSLQRFAR K  T
Sbjct: 582  NLSTKKQKISG-EIELPKSLQRFARKKATT 610


>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like
            [Glycine max]
          Length = 535

 Score =  742 bits (1915), Expect = 0.0
 Identities = 363/533 (68%), Positives = 433/533 (81%)
 Frame = -2

Query: 1776 QENGDPIKIRPNNXXXXXXXXXIKAKKYLRGEAANLEVLKDKKLKGHLAAREKLYGTSAV 1597
            +EN    K +P+          ++ KKYLRGE ANLE LKDKKLKG LAA+E LYG SA 
Sbjct: 5    KENVPLPKTKPSTEQDVTDELDLRMKKYLRGEGANLEGLKDKKLKGQLAAKEDLYGKSAK 64

Query: 1596 AAAKAEKWLMPTEGGYLEPEGIEKTWRIKQESIASEVDISSSKNQFDIVLPELGPYSLDF 1417
            AAAKAEKWLMP+EGGYLE EG+EKTWRIKQE+IA EVDISSS+ Q+DI+LPELGPY+LDF
Sbjct: 65   AAAKAEKWLMPSEGGYLEAEGLEKTWRIKQEAIAHEVDISSSRKQYDIILPELGPYTLDF 124

Query: 1416 TSSGRYMALAGRKGHLALIDVKSMDLMKEIQVQETIRDVVFLHNELFLAAAQKKYTYIYN 1237
            TSSGRYMA++GRKGHL ++D+ ++ +++E QV+ET+RDV FLHNELF AAAQKKY YIYN
Sbjct: 125  TSSGRYMAVSGRKGHLGIVDMINLSIIREFQVRETVRDVAFLHNELFFAAAQKKYPYIYN 184

Query: 1236 RVGTELHCLKEHGPVLKLQFLKNHFLLASMNKYGQLRYQDVTTGVMAGCHRTGQGRCDVM 1057
            R GTELHCLKEHGPVL+LQFL+NHFLLAS+NK+GQLRYQDVT G M G  RTG GR +VM
Sbjct: 185  REGTELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVGNFRTGLGRTNVM 244

Query: 1056 HVNPFNGVIASGHSNGTVNMWKPTSGAPLVKMLCHQGPVTALAFHLNGHLMATAGLDKKI 877
             VNPFNGV++ GHS GTV MWKPTS +PLVKMLCH GPV+ALAFH NG LMATAG DKKI
Sbjct: 245  QVNPFNGVVSLGHSGGTVTMWKPTSASPLVKMLCHHGPVSALAFHSNGLLMATAGKDKKI 304

Query: 876  KLWDLRKFEVLQQLPGHAKTLNFSQKGLLAAATGSSVQVLGDLNGSNKYHRYMNHSMAKG 697
            KLWDLRKFEVLQ LPGHA TL+FSQKGLLA   GS +Q+L D++G+  Y +YM HSM KG
Sbjct: 305  KLWDLRKFEVLQTLPGHANTLDFSQKGLLACGNGSLIQILRDVSGTQNYSKYMTHSMVKG 364

Query: 696  FQIQEVAFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPYETSRQRREKEIRSLLD 517
            +QI ++ FRPYEDVLGIGHSMGWSSIL PGAGEPNFDSWVANP+ETS+QRREKEIRSLLD
Sbjct: 365  YQIGKLVFRPYEDVLGIGHSMGWSSILTPGAGEPNFDSWVANPFETSKQRREKEIRSLLD 424

Query: 516  KLPPESVMLDPSKIGTVRPIKKKSKPTKQERESELEAAVAAAKSIXXXXXXXXXXXXXXX 337
            KLPPE++MLDPSKIGTV+P  ++ +PTKQERE+E+EA V AAK +               
Sbjct: 425  KLPPETIMLDPSKIGTVKP--RRERPTKQEREAEIEAGVEAAKGMKLKKKTKGRNKPGKR 482

Query: 336  XXXKYEAVDRAKRPFMETQVEDEKSLNKKAKTENVENNLPKSLQRFARNKPAT 178
               K EAV R KRP++E ++++E+S+++K +  + +  LPKSLQRFAR K ++
Sbjct: 483  VQKKQEAVSRVKRPYLEQKIQEEESISRKKQKTSEDVELPKSLQRFARKKASS 535


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like
            [Cucumis sativus] gi|449528879|ref|XP_004171429.1|
            PREDICTED: probable U3 small nucleolar RNA-associated
            protein 7-like [Cucumis sativus]
          Length = 536

 Score =  741 bits (1914), Expect = 0.0
 Identities = 369/538 (68%), Positives = 438/538 (81%), Gaps = 3/538 (0%)
 Frame = -2

Query: 1782 VEQENGDPI--KIRPNNXXXXXXXXXIKAKKYLRGEAANLEVLKDKKLKGHLAAREKLYG 1609
            +E+E G+ +  +I P           +K KKY+RGE ANLEVLKDKKLKG L+A E LYG
Sbjct: 1    MEKELGNVVTERILPPTEQEVSNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSAIEDLYG 60

Query: 1608 TSAVAAAKAEKWLMPTEGGYLEPEGIEKTWRIKQESIASEVDISSSKNQFDIVLPELGPY 1429
             SA AAA+ EKWLMP+EGGYLE EG+EKTWRIKQE+I+ EVDI S +NQ DI+LP LGPY
Sbjct: 61   KSAKAAAEVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 1428 SLDFTSSGRYMALAGRKGHLALIDVKSMDLMKEIQVQETIRDVVFLHNELFLAAAQKKYT 1249
            S+D+TS+GRYMA+AGRKGHLAL+D+K ++L+KE QV+ET+RDVVFLHNELF AAAQKKY 
Sbjct: 121  SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 1248 YIYNRVGTELHCLKEHGPVLKLQFLKNHFLLASMNKYGQLRYQDVTTGVMAGCHRTGQGR 1069
            YIYNR GTELHCLKEHG V +LQFLKNHFLL S+NK+GQL YQDVTTG M G  RTG GR
Sbjct: 181  YIYNREGTELHCLKEHGSVRRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVGSFRTGLGR 240

Query: 1068 CDVMHVNPFNGVIASGHSNGTVNMWKPTSGAPLVKMLCHQGPVTALAFHLNGHLMATAGL 889
             DVM VNPFNGVIA+GHS G+V MWKPTS APLVKMLCH GPV+ALAFH NGHLMAT+G 
Sbjct: 241  TDVMQVNPFNGVIATGHSGGSVAMWKPTSSAPLVKMLCHPGPVSALAFHPNGHLMATSGA 300

Query: 888  DKKIKLWDLRKFEVLQQLPGHAKTLNFSQKGLLAAATGSSVQVLGDLNGSNKYHRYMNHS 709
            ++KIKLWDLRKFEVLQ LPGHAKTL+FSQKGLLA  TGS VQ+LGD +G+  Y+RYM HS
Sbjct: 301  ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLAYGTGSFVQILGDFSGAQNYNRYMAHS 360

Query: 708  MAKGFQIQEVAFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPYETSRQRREKEIR 529
            MAKG+QI ++ FRPYEDVLGIGHSMGWSSILIPG+GEPNFD+WVANP+ETS+QRREKE+R
Sbjct: 361  MAKGYQIGKILFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR 420

Query: 528  SLLDKLPPESVMLDPSKIGTVRPIKKKSKPTKQERESELEAAVAAAKSIXXXXXXXXXXX 349
            SLLDKLPPE++ L+P+KIGT+  +KKK K TK+ER++E EAAV AAK I           
Sbjct: 421  SLLDKLPPETISLNPTKIGTLMAVKKKEKKTKKERDAEEEAAVDAAKGITMKKKTKGRNK 480

Query: 348  XXXXXXXKYEAVDRAKRPFMETQVEDEKSLNKKAK-TENVENNLPKSLQRFARNKPAT 178
                   K+E +++AKRPF+  Q+++E+   KK++ +E VE  LPKSLQRFAR K AT
Sbjct: 481  PTKREKKKHEIIEKAKRPFLHEQIKEEELSRKKSRLSEEVE--LPKSLQRFARKKTAT 536


>ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  739 bits (1908), Expect = 0.0
 Identities = 365/534 (68%), Positives = 428/534 (80%)
 Frame = -2

Query: 1788 MAVEQENGDPIKIRPNNXXXXXXXXXIKAKKYLRGEAANLEVLKDKKLKGHLAAREKLYG 1609
            M  +QENGDP  I P           +K KKYLRGE A+LEVLKDKKLKG L  RE LYG
Sbjct: 1    MGAKQENGDPEDILPPPEQELSHELDMKVKKYLRGEGADLEVLKDKKLKGQLYDRENLYG 60

Query: 1608 TSAVAAAKAEKWLMPTEGGYLEPEGIEKTWRIKQESIASEVDISSSKNQFDIVLPELGPY 1429
             SA AAAK EKWL+P+EGGYLE EGIEKTWRIKQ++I  EVDISS+KNQ+DIVLP+ GPY
Sbjct: 61   KSAKAAAKTEKWLLPSEGGYLEAEGIEKTWRIKQDTIGREVDISSAKNQYDIVLPDFGPY 120

Query: 1428 SLDFTSSGRYMALAGRKGHLALIDVKSMDLMKEIQVQETIRDVVFLHNELFLAAAQKKYT 1249
            +LDFTSSGRYMA AGRKGHLA++D+K+M L+KE+QV+ET+RDVVFLHNELF AAAQKKY 
Sbjct: 121  TLDFTSSGRYMAAAGRKGHLAVVDMKNMSLIKEMQVRETVRDVVFLHNELFFAAAQKKYP 180

Query: 1248 YIYNRVGTELHCLKEHGPVLKLQFLKNHFLLASMNKYGQLRYQDVTTGVMAGCHRTGQGR 1069
            YIYNR G ELHCLKEHG V +LQFLKNHFLLAS+NK+GQLRYQDVT G M    RTG GR
Sbjct: 181  YIYNRDGVELHCLKEHGAVTRLQFLKNHFLLASINKFGQLRYQDVTMGEMISNFRTGLGR 240

Query: 1068 CDVMHVNPFNGVIASGHSNGTVNMWKPTSGAPLVKMLCHQGPVTALAFHLNGHLMATAGL 889
             DVM  NPFNGV+A GHS GTV+MWKPTS  PLVKMLCH GP+TA+AFH +GHLMAT+G 
Sbjct: 241  TDVMQANPFNGVVALGHSGGTVSMWKPTSAVPLVKMLCHPGPITAMAFHPDGHLMATSGK 300

Query: 888  DKKIKLWDLRKFEVLQQLPGHAKTLNFSQKGLLAAATGSSVQVLGDLNGSNKYHRYMNHS 709
            +KKIK+WD+RKFEVLQ + GHAKTL+FSQKGLLAA TGS VQV GD +GS  Y R+M HS
Sbjct: 301  EKKIKIWDVRKFEVLQTIRGHAKTLDFSQKGLLAAGTGSFVQVFGDFSGSRNYSRHMGHS 360

Query: 708  MAKGFQIQEVAFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPYETSRQRREKEIR 529
            + KG+QI +VAFRPYEDVLGIGHS GWSSILIPG+GEPNFD+W+ANP+ET++QRREKEI 
Sbjct: 361  IVKGYQIGKVAFRPYEDVLGIGHSTGWSSILIPGSGEPNFDTWLANPFETTKQRREKEIH 420

Query: 528  SLLDKLPPESVMLDPSKIGTVRPIKKKSKPTKQERESELEAAVAAAKSIXXXXXXXXXXX 349
            SLLDKLPPE++MLDPSKIGTV+  KKK KPTK+E E+++EAAV AAK             
Sbjct: 421  SLLDKLPPETIMLDPSKIGTVKSAKKKEKPTKKEMEADMEAAVEAAKGTAIKNKTKGKNK 480

Query: 348  XXXXXXXKYEAVDRAKRPFMETQVEDEKSLNKKAKTENVENNLPKSLQRFARNK 187
                   K E V RAK+PF++ Q+++E+ + KK +  + E +LP +LQRFAR K
Sbjct: 481  PSKIAVKKKEIVVRAKKPFLDQQMKEEEKVAKKKQKISEEISLPTALQRFARKK 534


Top