BLASTX nr result

ID: Bupleurum21_contig00008583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008583
         (2249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   519   e-144
ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   518   e-144
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   517   e-144
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   512   e-142
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   506   e-140

>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  519 bits (1337), Expect = e-144
 Identities = 277/425 (65%), Positives = 307/425 (72%)
 Frame = -1

Query: 2129 MDILREELSKKRKALSEQVGGKRIFKRSEIEQKRIQQLREEERRDAEQKLLRQNQSHXXX 1950
            MD+L++EL KKR++L+++ GGKR FKRSEIEQ+ IQ+LRE+E+R+ E K LR N      
Sbjct: 1    MDLLKQELLKKRQSLAQEAGGKRFFKRSEIEQRNIQKLREQEKRELEAKALRHNNGTASS 60

Query: 1949 XXXXXXXXXXXXXXTEIPKSRSDAASASVSKTLTDEEKIDLMNLPXXXXXXXXXXXXXXX 1770
                             P    D  S+S SK +TDE+KID M LP               
Sbjct: 61   STAAAASATSTPSSDAKP----DLTSSS-SKAITDEQKIDEMVLPK-------------- 101

Query: 1769 XXXXXXXXXXQEVIRRLRFLKQPITLFGEDDEARLSRMKYVLKAGLFEVDDDMTEGQTND 1590
                      QEVIRRLRFLKQPITLFGEDD ARL R+KYVLKAG+FEVD DMTEGQTND
Sbjct: 102  ----------QEVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGIFEVDSDMTEGQTND 151

Query: 1589 FLRDIVELKKRQKMGNMGDRKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRMR 1410
            FLRDI EL+KRQK G + DRKRK                                 KRM+
Sbjct: 152  FLRDIAELRKRQKTGILSDRKRKSPEDGVEDGEGGGGDDDLSGDGGSSGVDADKDLKRMK 211

Query: 1409 ANFEELCDEDKILVFFKRLLIEWKQELHAMTDSEKRTAKGKSTVATFQQCARYLNPLFKF 1230
            ANFEELCDEDKILVFFKRLLIEW QEL+   + EKRTAKGKS VATF+QCARYLNPLFKF
Sbjct: 212  ANFEELCDEDKILVFFKRLLIEWNQELNEKQEGEKRTAKGKSMVATFKQCARYLNPLFKF 271

Query: 1229 CRKKVLPDDIRQALMLMVNCCKKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAREK 1050
            CRKKVL DDIRQAL+++V CC KRDYLAAMD YI++AIGNAPWPIGVTMVGIHERSAREK
Sbjct: 272  CRKKVLQDDIRQALLVVVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREK 331

Query: 1049 IYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER 870
            IYTNSVAHIMNDETTRKYLQS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER
Sbjct: 332  IYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER 391

Query: 869  VDGGN 855
              GGN
Sbjct: 392  FSGGN 396


>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
            gi|449491488|ref|XP_004158914.1| PREDICTED:
            pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  518 bits (1334), Expect = e-144
 Identities = 274/426 (64%), Positives = 315/426 (73%), Gaps = 2/426 (0%)
 Frame = -1

Query: 2129 MDILREELSKKRKALSEQVGGKRIFKRSEIEQKRIQQLREEERRDAEQKLLRQNQSHXXX 1950
            MD+L++EL KKR+AL+ + GGKR+FKRSEIEQ++IQQLRE+E+R+ E K LRQ+ +    
Sbjct: 1    MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 1949 XXXXXXXXXXXXXXTEIPKSRSDAASASV--SKTLTDEEKIDLMNLPXXXXXXXXXXXXX 1776
                          +    S S A +++   SK+LTDE+ ID + LP             
Sbjct: 61   AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPR------------ 108

Query: 1775 XXXXXXXXXXXXQEVIRRLRFLKQPITLFGEDDEARLSRMKYVLKAGLFEVDDDMTEGQT 1596
                        QEVIRRLRFLKQPITLFGEDD+ARL R+K+VLKAGLFEVD D+TEGQT
Sbjct: 109  ------------QEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQT 156

Query: 1595 NDFLRDIVELKKRQKMGNMGDRKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKR 1416
            NDFLRDI EL+KRQK G + +RKR+                                 KR
Sbjct: 157  NDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKR 216

Query: 1415 MRANFEELCDEDKILVFFKRLLIEWKQELHAMTDSEKRTAKGKSTVATFQQCARYLNPLF 1236
            M+ANF+ELC+EDKILVFFKRLL EWKQEL  M ++EKRTAKGKS VATF+QCARYL+PLF
Sbjct: 217  MKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLF 276

Query: 1235 KFCRKKVLPDDIRQALMLMVNCCKKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAR 1056
            KFCRKKVLPDDIRQAL+++V CC KRDYLAAMD YI+MAIGNAPWPIGVTMVGIHERSAR
Sbjct: 277  KFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAR 336

Query: 1055 EKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE 876
            EKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE
Sbjct: 337  EKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE 396

Query: 875  ERVDGG 858
            ERV GG
Sbjct: 397  ERVSGG 402


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
            gi|223540111|gb|EEF41688.1| potassium channel regulatory
            factor, putative [Ricinus communis]
          Length = 417

 Score =  517 bits (1331), Expect = e-144
 Identities = 274/427 (64%), Positives = 315/427 (73%), Gaps = 2/427 (0%)
 Frame = -1

Query: 2129 MDILREELSKKRKALSEQVGGKRIFKRSEIEQKRIQQLREEERRDAEQKLLRQNQSHXXX 1950
            MD+L++EL KKR++L++  GGKR+FKRSEI+QK IQ+LRE+E+++ E K  RQ+ S    
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKQELEAKAKRQSSS--TE 58

Query: 1949 XXXXXXXXXXXXXXTEIPKSRSDAASASVSKTLTDEEKIDLMNLPXXXXXXXXXXXXXXX 1770
                               + + +A+A+ SK+LT+E+ ID + LP               
Sbjct: 59   TATTTTSTSSTANTPSTTTTTTTSAAATTSKSLTNEQNIDNLILPK-------------- 104

Query: 1769 XXXXXXXXXXQEVIRRLRFLKQPITLFGEDDEARLSRMKYVLKAGLFEVDDDMTEGQTND 1590
                      QEVIRRLRFLKQPITLFGEDD+ARL R+K+VLKAG+FEVD DMTEGQTND
Sbjct: 105  ----------QEVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAGIFEVDSDMTEGQTND 154

Query: 1589 FLRDIVELKKRQKMGNMGDRKRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--KR 1416
            FLRDI EL+KRQK G + +RKRK                                   KR
Sbjct: 155  FLRDIAELRKRQKSGIVSERKRKDREEGAGEDGEGGEGEREMSGDGDSSGGVDADKDLKR 214

Query: 1415 MRANFEELCDEDKILVFFKRLLIEWKQELHAMTDSEKRTAKGKSTVATFQQCARYLNPLF 1236
            M+ANFEELCDEDKILVFFKRLLIEWKQEL  M ++EKRTAKGKS VATF+QCARYL+PLF
Sbjct: 215  MKANFEELCDEDKILVFFKRLLIEWKQELDEMAEAEKRTAKGKSMVATFKQCARYLHPLF 274

Query: 1235 KFCRKKVLPDDIRQALMLMVNCCKKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAR 1056
            KFCRKKVLPDDIRQAL+++V CC KRDYLAAMDHYI++AIGNAPWPIGVTMVGIHERSAR
Sbjct: 275  KFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAR 334

Query: 1055 EKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE 876
            EKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE
Sbjct: 335  EKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAE 394

Query: 875  ERVDGGN 855
            ERV  GN
Sbjct: 395  ERVHSGN 401


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  512 bits (1319), Expect = e-142
 Identities = 275/432 (63%), Positives = 312/432 (72%), Gaps = 7/432 (1%)
 Frame = -1

Query: 2129 MDILREELSKKRKALSEQVGGKRIFKRSEIEQKRIQQLREEERRDAEQKLLRQNQSHXXX 1950
            MD+L++EL KKR++L++  GGK+ FKRSEI+QK IQ+LR++E+R+ E K L++  +    
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLRQQEKRELEAKSLKRLATSSDT 60

Query: 1949 XXXXXXXXXXXXXXTEIPKSRSDAAS------ASVSKTLTDEEKIDLMNLPXXXXXXXXX 1788
                             P S S A+S      AS S +LTDE+ ID + LP         
Sbjct: 61   AATA-------------PSSSSTASSSASSTIASASASLTDEQNIDNLVLPKP------- 100

Query: 1787 XXXXXXXXXXXXXXXXQEVIRRLRFLKQPITLFGEDDEARLSRMKYVLKAGLFEVDDDMT 1608
                             EVIRRLRFLKQP+TLFGEDD+ARL R+KYVLKAG+FEVD DMT
Sbjct: 101  -----------------EVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMT 143

Query: 1607 EGQTNDFLRDIVELKKRQKMGNMGDRKR-KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1431
            EGQTNDFLRDI EL+KRQK G +G+RKR K                              
Sbjct: 144  EGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAQDREGGAGDDDLSDCGSSEGAEAD 203

Query: 1430 XXSKRMRANFEELCDEDKILVFFKRLLIEWKQELHAMTDSEKRTAKGKSTVATFQQCARY 1251
               KRM+ANFEELCDEDKILVFFK+LL EWKQEL  M ++EKRTAKGKS VATF+QCARY
Sbjct: 204  KDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARY 263

Query: 1250 LNPLFKFCRKKVLPDDIRQALMLMVNCCKKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIH 1071
            LNPLFKFCRKKVLPDDIRQAL+LMV CC KRDYLAAMDHYI++AIGNAPWPIGVTMVGIH
Sbjct: 264  LNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIH 323

Query: 1070 ERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQ 891
            ERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPT+PSKAVEFNSLANGSDL 
Sbjct: 324  ERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLH 383

Query: 890  SLLAEERVDGGN 855
            SLLAEER  GGN
Sbjct: 384  SLLAEERFSGGN 395


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  506 bits (1303), Expect = e-140
 Identities = 269/426 (63%), Positives = 307/426 (72%), Gaps = 1/426 (0%)
 Frame = -1

Query: 2129 MDILREELSKKRKALSEQVGGKRIFKRSEIEQKRIQQLREEERRDAEQKLLRQNQSHXXX 1950
            MD+L++EL KKR++L++  GGK+ FKRSEI+QK IQ+LRE+E+R+ E K      S    
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAK------SQKRL 54

Query: 1949 XXXXXXXXXXXXXXTEIPKSRSDAASASVSKTLTDEEKIDLMNLPXXXXXXXXXXXXXXX 1770
                          +    S S   ++S + +LT+E+ ID + LP               
Sbjct: 55   ATSSDNAATAPSSSSTASASASSTIASSSAASLTNEQNIDNLVLPKP------------- 101

Query: 1769 XXXXXXXXXXQEVIRRLRFLKQPITLFGEDDEARLSRMKYVLKAGLFEVDDDMTEGQTND 1590
                       EVIRRLRFLKQP+TLFGEDD+ARL R+KYVLKAG+FEVD DMTEGQTND
Sbjct: 102  -----------EVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTND 150

Query: 1589 FLRDIVELKKRQKMGNMGDRKR-KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRM 1413
            FLRDI EL+KRQK G +G+RKR K                                 KRM
Sbjct: 151  FLRDIAELRKRQKTGILGERKRQKADDGAAEDREGGAGDDDLSDCGGSDGADADKDLKRM 210

Query: 1412 RANFEELCDEDKILVFFKRLLIEWKQELHAMTDSEKRTAKGKSTVATFQQCARYLNPLFK 1233
            +ANFEELCDEDKILVFFK+LL EWKQEL  M ++EKRTAKGKS VATF+QCARYLNPLFK
Sbjct: 211  KANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFK 270

Query: 1232 FCRKKVLPDDIRQALMLMVNCCKKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSARE 1053
            FCRKKVLPDDIRQAL+LMV CC +RDYLAAMDHYI++AIGNAPWPIGVTMVGIHERSARE
Sbjct: 271  FCRKKVLPDDIRQALLLMVECCMRRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSARE 330

Query: 1052 KIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE 873
            KIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPT+PSKAVEFNSLANGSDL SLLAEE
Sbjct: 331  KIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEE 390

Query: 872  RVDGGN 855
            R  GGN
Sbjct: 391  RFSGGN 396


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