BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008560
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   299   1e-78
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              288   2e-75
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   286   6e-75
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   285   2e-74
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69

>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  299 bits (765), Expect = 1e-78
 Identities = 154/226 (68%), Positives = 179/226 (79%), Gaps = 11/226 (4%)
 Frame = +3

Query: 75  MADAYWRNAQRDPAQPP------LLGKRPRPEFDVPRAHDLPNYYGRDDGRSAARGMRDG 236
           MADAYWR    D  QPP      ++GKR R ++DVP  H+LP+Y+ RDD R   RGMRD 
Sbjct: 1   MADAYWRYG--DSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDT 58

Query: 237 NSLGASYDRHLLATTQLGSYSRGEPIRPISGG---RPIDDFRIMGIGS-DPAVA-KHHTM 401
           +S+GASYDR+L  + Q+ SY  G+  RPISGG   R +DD RI+G+GS +PA   K  T+
Sbjct: 59  DSIGASYDRYL-RSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTL 117

Query: 402 GVGGARPEHPLPADASSTLFVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDP 581
           G GG RPE PLP DASSTLFVEGLP+NC+RREVAHIFRPFVGYKEVRLV+K+SRH  GDP
Sbjct: 118 GYGGGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 177

Query: 582 LVLCFVDFLTPAHAATAMDALQGYRFDEHDRDSVNLRLQFARYPGA 719
           LVLCFVDFL+PAHAATAMDALQGY+FDEHDRDSV+LRLQFARYPGA
Sbjct: 178 LVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARYPGA 223


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  288 bits (736), Expect = 2e-75
 Identities = 147/222 (66%), Positives = 175/222 (78%), Gaps = 7/222 (3%)
 Frame = +3

Query: 75  MADAYWR--NAQRDPAQPPLLGKRPRPEFDVPRAHDLPNYYGRDDGRSAARGMRDGNSLG 248
           MAD YWR    ++ P  P L  KRPR ++DVP  HDLP+Y+ R+D R+A R +RD +S+G
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 249 ASYDRHLLATTQLGSYSRGEPIRPISGG---RPIDDFRIMGI-GSDP-AVAKHHTMGVGG 413
           ASYDR+L    Q+ SY  G+  RP+SGG    P+DD R++G+ G D  A  K  ++G  G
Sbjct: 61  ASYDRYL-RNAQMPSYG-GDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 118

Query: 414 ARPEHPLPADASSTLFVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDPLVLC 593
            RPE PLP DASSTLFVEGLPANC+RREV+HIFRPFVGYKEVRLV+K+SRHS GDPLVLC
Sbjct: 119 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 178

Query: 594 FVDFLTPAHAATAMDALQGYRFDEHDRDSVNLRLQFARYPGA 719
           FVDF++PAHAATAMDALQGY+FDEHDRDSVNLRLQFARYPGA
Sbjct: 179 FVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGA 220


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  286 bits (733), Expect = 6e-75
 Identities = 151/223 (67%), Positives = 173/223 (77%), Gaps = 8/223 (3%)
 Frame = +3

Query: 75  MADAYWRNAQ-RDPAQPP---LLGKRPRPEFDVPRAHDLPNYYGRDDGRSAARGMRDGNS 242
           MADAYWR +  R P Q P   L+GKR R ++DV   H+LPNYY RDD R A R +RD +S
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 243 LGASYDRHLLATTQLGSYSRGEPIRPISG--GRPIDDFRIMGIGS-DPA-VAKHHTMGVG 410
           +GASYDR+L  +  + SYS G+  RPISG   R  DD RIMGIG  DP    K  T+G+G
Sbjct: 61  IGASYDRYL-RSAPISSYSGGQSARPISGVPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 411 GARPEHPLPADASSTLFVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDPLVL 590
             RPE  LP DA+STLFVEGLP++CSRREVAHIFRPFVGYKEVRLV+K+SR   GDPLVL
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179

Query: 591 CFVDFLTPAHAATAMDALQGYRFDEHDRDSVNLRLQFARYPGA 719
           CFVDFL+PAHAATAMDALQGY+FDEHDRDSV+LRLQFARYPGA
Sbjct: 180 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARYPGA 222


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  285 bits (729), Expect = 2e-74
 Identities = 146/222 (65%), Positives = 174/222 (78%), Gaps = 7/222 (3%)
 Frame = +3

Query: 75  MADAYWR--NAQRDPAQPPLLGKRPRPEFDVPRAHDLPNYYGRDDGRSAARGMRDGNSLG 248
           MAD YWR    ++ P  P L  KRPR ++DVP  HDLP+Y+ R+D R+A R +RD +S+G
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 249 ASYDRHLLATTQLGSYSRGEPIRPISGG---RPIDDFRIMGI-GSDP-AVAKHHTMGVGG 413
           ASYDR+L     + SY  G+  RP+SGG    P+DD R++G+ G D  A  K  ++G  G
Sbjct: 61  ASYDRYL--RNAMPSYG-GDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 117

Query: 414 ARPEHPLPADASSTLFVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDPLVLC 593
            RPE PLP DASSTLFVEGLPANC+RREV+HIFRPFVGYKEVRLV+K+SRHS GDPLVLC
Sbjct: 118 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 177

Query: 594 FVDFLTPAHAATAMDALQGYRFDEHDRDSVNLRLQFARYPGA 719
           FVDF++PAHAATAMDALQGY+FDEHDRDSVNLRLQFARYPGA
Sbjct: 178 FVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGA 219


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  269 bits (687), Expect = 1e-69
 Identities = 140/224 (62%), Positives = 168/224 (75%), Gaps = 9/224 (4%)
 Frame = +3

Query: 75  MADAYWRNAQRDPAQPP-----LLGKRPRPEFDVPRAHDLPNYYGRDDGRSAARGMRDGN 239
           MAD+YWR A     QPP     L GKRPR ++D+P   DL +YY RDD R A   +RD +
Sbjct: 1   MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60

Query: 240 SLGASYDRHLLATTQLGSYSRGEPIRPISG--GRPIDDFRIMGIGS-DP-AVAKHHTMGV 407
           S+GASYDR+L + T + SY  G+  R +SG    P+DD R++ +G  DP A  K  ++ +
Sbjct: 61  SIGASYDRYLRSGT-VSSYGGGQSARAMSGVPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119

Query: 408 GGARPEHPLPADASSTLFVEGLPANCSRREVAHIFRPFVGYKEVRLVTKDSRHSKGDPLV 587
           G  R E  LP DASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLV+K+SRH  GDPLV
Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLV 179

Query: 588 LCFVDFLTPAHAATAMDALQGYRFDEHDRDSVNLRLQFARYPGA 719
           LCFVDFL+PAHAATAMDALQGYRFDEHDRDS +LRLQFARYPGA
Sbjct: 180 LCFVDFLSPAHAATAMDALQGYRFDEHDRDSFHLRLQFARYPGA 223