BLASTX nr result

ID: Bupleurum21_contig00008550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008550
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-l...    72   6e-11
emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]    68   7e-10
ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab...    60   1e-07
ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002516984.1| nucleotide binding protein, putative [Ricinu...    56   3e-06

>ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera]
           gi|296083309|emb|CBI22945.3| unnamed protein product
           [Vitis vinifera]
          Length = 628

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
 Frame = -2

Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157
           K L++MWQ+RS +G YVLPWI  +LVNHS  IVS+EP+T LL+SL++  K+     QSL+
Sbjct: 510 KVLVTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVTQLLDSLHQSTKSRGTAVQSLL 569

Query: 156 M---NLMMCGWKLYSSSKAICRLHH 91
                L +   ++  +S+ I ++ H
Sbjct: 570 QLSGGLQLVMAQIDKASQNISQIQH 594


>emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]
          Length = 692

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
 Frame = -2

Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157
           K L++MWQ+RS +G YVLPWI  +LVNHS  IVS+EP+  LL+SL+   K+     QSL+
Sbjct: 574 KVLVTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVIQLLDSLHLSTKSRGTAVQSLL 633

Query: 156 M---NLMMCGWKLYSSSKAICRLHH 91
                L +   ++  +S+ I ++ H
Sbjct: 634 QLSGGLQLVMAQIDKASQNISQIQH 658


>ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp.
           lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein
           ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata]
          Length = 615

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -2

Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157
           ++L++MWQTR+  G+++LPWI  ++VNHS  I+S+EP   LL +L KI K+     Q L+
Sbjct: 486 EALVAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLLNTLVKITKSRGTALQQLL 545


>ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|222864522|gb|EEF01653.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -2

Query: 330 LLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKE-PITMLLESLYKIEKA 184
           L++ WQ+RS++GK VLPWI C+LVNH   IV++E P + +L SL KI K+
Sbjct: 500 LVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQMLNSLLKITKS 549


>ref|XP_002516984.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544072|gb|EEF45598.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 586

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -2

Query: 330 LLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKE-PITMLLESLYKIEKAVNNKSQSLM 157
           L++ WQ+RS +GKYVLPW+ C+LVNH   I++++ P T +L SL +I K+     Q L+
Sbjct: 496 LVAKWQSRSCSGKYVLPWMYCILVNHGHHIMAQDKPETQMLNSLLEITKSRGVAIQPLL 554


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