BLASTX nr result
ID: Bupleurum21_contig00008550
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00008550 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-l... 72 6e-11 emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera] 68 7e-10 ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab... 60 1e-07 ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 ref|XP_002516984.1| nucleotide binding protein, putative [Ricinu... 56 3e-06 >ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera] gi|296083309|emb|CBI22945.3| unnamed protein product [Vitis vinifera] Length = 628 Score = 71.6 bits (174), Expect = 6e-11 Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 3/85 (3%) Frame = -2 Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157 K L++MWQ+RS +G YVLPWI +LVNHS IVS+EP+T LL+SL++ K+ QSL+ Sbjct: 510 KVLVTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVTQLLDSLHQSTKSRGTAVQSLL 569 Query: 156 M---NLMMCGWKLYSSSKAICRLHH 91 L + ++ +S+ I ++ H Sbjct: 570 QLSGGLQLVMAQIDKASQNISQIQH 594 >emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera] Length = 692 Score = 68.2 bits (165), Expect = 7e-10 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%) Frame = -2 Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157 K L++MWQ+RS +G YVLPWI +LVNHS IVS+EP+ LL+SL+ K+ QSL+ Sbjct: 574 KVLVTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVIQLLDSLHLSTKSRGTAVQSLL 633 Query: 156 M---NLMMCGWKLYSSSKAICRLHH 91 L + ++ +S+ I ++ H Sbjct: 634 QLSGGLQLVMAQIDKASQNISQIQH 658 >ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata] Length = 615 Score = 60.5 bits (145), Expect = 1e-07 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = -2 Query: 336 KSLLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKEPITMLLESLYKIEKAVNNKSQSLM 157 ++L++MWQTR+ G+++LPWI ++VNHS I+S+EP LL +L KI K+ Q L+ Sbjct: 486 EALVAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLLNTLVKITKSRGTALQQLL 545 >ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|222864522|gb|EEF01653.1| predicted protein [Populus trichocarpa] Length = 617 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%) Frame = -2 Query: 330 LLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKE-PITMLLESLYKIEKA 184 L++ WQ+RS++GK VLPWI C+LVNH IV++E P + +L SL KI K+ Sbjct: 500 LVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQMLNSLLKITKS 549 >ref|XP_002516984.1| nucleotide binding protein, putative [Ricinus communis] gi|223544072|gb|EEF45598.1| nucleotide binding protein, putative [Ricinus communis] Length = 586 Score = 55.8 bits (133), Expect = 3e-06 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Frame = -2 Query: 330 LLSMWQTRSSTGKYVLPWICCLLVNHSDIIVSKE-PITMLLESLYKIEKAVNNKSQSLM 157 L++ WQ+RS +GKYVLPW+ C+LVNH I++++ P T +L SL +I K+ Q L+ Sbjct: 496 LVAKWQSRSCSGKYVLPWMYCILVNHGHHIMAQDKPETQMLNSLLEITKSRGVAIQPLL 554