BLASTX nr result

ID: Bupleurum21_contig00008516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008516
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22374.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255...   108   6e-22
emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]   108   6e-22
ref|XP_002521981.1| protein farnesyltransferase alpha subunit, p...   100   2e-19
ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>emb|CBI22374.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 15/119 (12%)
 Frame = -1

Query: 312 STHDAEYYKICMDELDWNEMLIKRYIGREALWLYRRFLSSYWINLVAGD-------TEFK 154
           S ++ E Y++  +ELDWN+MLI+RYIGRE LWL+RRFLS  WI   A D       +E K
Sbjct: 333 SGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFATDGGDLSCHSELK 392

Query: 153 T--------FLDDELQLFNSCQEFSVDDFEDYRAQAMFAATYMLWIARHCSKFPGIELE 1
           T        FLD+E+Q  +SC     DDFED   QA+F+ATY+LW+ +   +  GIEL+
Sbjct: 393 TDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYECEGIELQ 451


>ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255283 [Vitis vinifera]
          Length = 425

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 15/119 (12%)
 Frame = -1

Query: 312 STHDAEYYKICMDELDWNEMLIKRYIGREALWLYRRFLSSYWINLVAGD-------TEFK 154
           S ++ E Y++  +ELDWN+MLI+RYIGRE LWL+RRFLS  WI   A D       +E K
Sbjct: 278 SGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFATDGGDLSCHSELK 337

Query: 153 T--------FLDDELQLFNSCQEFSVDDFEDYRAQAMFAATYMLWIARHCSKFPGIELE 1
           T        FLD+E+Q  +SC     DDFED   QA+F+ATY+LW+ +   +  GIEL+
Sbjct: 338 TDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYECEGIELQ 396


>emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]
          Length = 742

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 15/119 (12%)
 Frame = -1

Query: 312 STHDAEYYKICMDELDWNEMLIKRYIGREALWLYRRFLSSYWINLVAGD-------TEFK 154
           S ++ E Y++  +ELDWN+MLI+RYIGRE LWL+RRFLS  WI   A D       +E K
Sbjct: 595 SGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFATDGGDLSCHSELK 654

Query: 153 T--------FLDDELQLFNSCQEFSVDDFEDYRAQAMFAATYMLWIARHCSKFPGIELE 1
           T        FLD+E+Q  +SC     DDFED   QA+F+ATY+LW+ +   +  GIEL+
Sbjct: 655 TDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYECEGIELQ 713


>ref|XP_002521981.1| protein farnesyltransferase alpha subunit, putative [Ricinus
           communis] gi|223538785|gb|EEF40385.1| protein
           farnesyltransferase alpha subunit, putative [Ricinus
           communis]
          Length = 431

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/116 (46%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
 Frame = -1

Query: 312 STHDAEYYKICMDELDWNEMLIKRYIGREALWLYRRFLSSYWINLVAGD----TEFKT-- 151
           S HD E  ++  +EL WNE LI+ Y+GREALWLYRRFLS  WI     D    +E K+  
Sbjct: 282 SDHDVEICQMWQEELQWNEELIELYVGREALWLYRRFLSLCWIRHFISDIIHHSEHKSRV 341

Query: 150 ------FLDDELQLFNSCQEFSVDDFEDYRAQAMFAATYMLWIARHCSKFPGIELE 1
                 FLD EL L NS      DD+ED++AQA+ +ATY+LW+ +   +  GIEL+
Sbjct: 342 VANINEFLDHELCLVNSWSTIPDDDYEDFQAQAVHSATYILWLMKQIPESQGIELK 397


>ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|222858033|gb|EEE95580.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/119 (45%), Positives = 72/119 (60%), Gaps = 20/119 (16%)
 Frame = -1

Query: 297 EYYKICMDELDWNEMLIKRYIGREALWLYRRFLSSYWINLVA---GDT------------ 163
           E Y+I  +ELDWNE LIK Y+GREALWL+RRFLS  WI       GDT            
Sbjct: 271 EIYRIWQEELDWNEALIKCYVGREALWLHRRFLSLSWIRHFTTNLGDTSNYRVCKSRINA 330

Query: 162 EFKTFLDDELQLFNSCQEFSVDDFEDYRAQAMFAATYMLWIA-----RHCSKFPGIELE 1
           +   F+D+EL L NSC     ++FED++AQA+++ATY+LW+      +  S   GIEL+
Sbjct: 331 DIGIFMDNELHLANSCSTIPDNEFEDFQAQALYSATYILWLTTLFFHQQISDSQGIELQ 389


Top