BLASTX nr result
ID: Bupleurum21_contig00008508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00008508 (788 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycin... 241 2e-61 ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3... 239 4e-61 ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3... 239 4e-61 gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum] 238 8e-61 gb|AFK40862.1| unknown [Medicago truncatula] 238 1e-60 >ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycine max] gi|255641264|gb|ACU20909.1| unknown [Glycine max] Length = 177 Score = 241 bits (614), Expect = 2e-61 Identities = 116/175 (66%), Positives = 131/175 (74%) Frame = +3 Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440 MQSQ++C+GCR++LLYPRG TSVPPPGMEMSQL CGGCRTLLMYTRGA+ Sbjct: 1 MQSQVVCNGCRSLLLYPRGATNVCCALCNTITSVPPPGMEMSQLYCGGCRTLLMYTRGAT 60 Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620 SVRCSCCHTVNLVP AS Q+AHV+CGNC TTLMYPYGAPSVKCA+CH++TNV+ N R+ Sbjct: 61 SVRCSCCHTVNLVP-PASNQVAHVHCGNCRTTLMYPYGAPSVKCALCHFITNVSTNNGRL 119 Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785 PIP RP+G VVV+NPMSVD SGKLVSNVVVGVTT Sbjct: 120 PIPVHRPNGTTNAGTLPTTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 174 >ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1| Lsd1-like protein [Medicago truncatula] Length = 223 Score = 239 bits (611), Expect = 4e-61 Identities = 116/175 (66%), Positives = 126/175 (72%) Frame = +3 Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440 MQSQL+C+GCR LLYPRG T+VPPPGM+MSQL CGGCRTLLMYTRGA+ Sbjct: 48 MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 107 Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620 SVRCSCCHTVNL P S Q+AHV CGNC TTLMYPYGAPSVKCAVCHY+TN+NM N R+ Sbjct: 108 SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 165 Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785 PIP RP G VVV+NPMSVD SGKLVSNVVVGVTT Sbjct: 166 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 220 >ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1| Lsd1-like protein [Medicago truncatula] Length = 211 Score = 239 bits (611), Expect = 4e-61 Identities = 116/175 (66%), Positives = 126/175 (72%) Frame = +3 Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440 MQSQL+C+GCR LLYPRG T+VPPPGM+MSQL CGGCRTLLMYTRGA+ Sbjct: 36 MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 95 Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620 SVRCSCCHTVNL P S Q+AHV CGNC TTLMYPYGAPSVKCAVCHY+TN+NM N R+ Sbjct: 96 SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 153 Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785 PIP RP G VVV+NPMSVD SGKLVSNVVVGVTT Sbjct: 154 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 208 >gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum] Length = 176 Score = 238 bits (608), Expect = 8e-61 Identities = 115/175 (65%), Positives = 126/175 (72%) Frame = +3 Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440 MQSQL+C+GCR +LLYPRG + VPPPGM+MSQL CGGCRTLLMYTRGA+ Sbjct: 1 MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60 Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620 SVRCSCCHTVNL P S Q+AHV C NC TTLMYPYGAPSVKCAVCHY+TN+NM N RV Sbjct: 61 SVRCSCCHTVNLAP--VSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRV 118 Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785 P+PA RP G VVV+NPMSVD SGKLVSNVVVGVTT Sbjct: 119 PVPANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDSSGKLVSNVVVGVTT 173 >gb|AFK40862.1| unknown [Medicago truncatula] Length = 176 Score = 238 bits (607), Expect = 1e-60 Identities = 115/175 (65%), Positives = 125/175 (71%) Frame = +3 Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440 MQSQL+C+GCR LLYPRG T+VPPPGM+MSQL CGGCRTLLMYTRGA+ Sbjct: 1 MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 60 Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620 SVRCSCCHTVNL P S Q+AHV CGNC TTLMYPYGAPSVKC VCHY+TN+NM N R+ Sbjct: 61 SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCVVCHYITNINMSNGRL 118 Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785 PIP RP G VVV+NPMSVD SGKLVSNVVVGVTT Sbjct: 119 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 173