BLASTX nr result

ID: Bupleurum21_contig00008508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008508
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycin...   241   2e-61
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   239   4e-61
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   239   4e-61
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               238   8e-61
gb|AFK40862.1| unknown [Medicago truncatula]                          238   1e-60

>ref|NP_001241344.1| uncharacterized protein LOC100776394 [Glycine max]
           gi|255641264|gb|ACU20909.1| unknown [Glycine max]
          Length = 177

 Score =  241 bits (614), Expect = 2e-61
 Identities = 116/175 (66%), Positives = 131/175 (74%)
 Frame = +3

Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440
           MQSQ++C+GCR++LLYPRG            TSVPPPGMEMSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQVVCNGCRSLLLYPRGATNVCCALCNTITSVPPPGMEMSQLYCGGCRTLLMYTRGAT 60

Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620
           SVRCSCCHTVNLVP  AS Q+AHV+CGNC TTLMYPYGAPSVKCA+CH++TNV+  N R+
Sbjct: 61  SVRCSCCHTVNLVP-PASNQVAHVHCGNCRTTLMYPYGAPSVKCALCHFITNVSTNNGRL 119

Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785
           PIP  RP+G                     VVV+NPMSVD SGKLVSNVVVGVTT
Sbjct: 120 PIPVHRPNGTTNAGTLPTTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 174


>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  239 bits (611), Expect = 4e-61
 Identities = 116/175 (66%), Positives = 126/175 (72%)
 Frame = +3

Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440
           MQSQL+C+GCR  LLYPRG            T+VPPPGM+MSQL CGGCRTLLMYTRGA+
Sbjct: 48  MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 107

Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620
           SVRCSCCHTVNL P   S Q+AHV CGNC TTLMYPYGAPSVKCAVCHY+TN+NM N R+
Sbjct: 108 SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 165

Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785
           PIP  RP G                     VVV+NPMSVD SGKLVSNVVVGVTT
Sbjct: 166 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 220


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  239 bits (611), Expect = 4e-61
 Identities = 116/175 (66%), Positives = 126/175 (72%)
 Frame = +3

Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440
           MQSQL+C+GCR  LLYPRG            T+VPPPGM+MSQL CGGCRTLLMYTRGA+
Sbjct: 36  MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 95

Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620
           SVRCSCCHTVNL P   S Q+AHV CGNC TTLMYPYGAPSVKCAVCHY+TN+NM N R+
Sbjct: 96  SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 153

Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785
           PIP  RP G                     VVV+NPMSVD SGKLVSNVVVGVTT
Sbjct: 154 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 208


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  238 bits (608), Expect = 8e-61
 Identities = 115/175 (65%), Positives = 126/175 (72%)
 Frame = +3

Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440
           MQSQL+C+GCR +LLYPRG            + VPPPGM+MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620
           SVRCSCCHTVNL P   S Q+AHV C NC TTLMYPYGAPSVKCAVCHY+TN+NM N RV
Sbjct: 61  SVRCSCCHTVNLAP--VSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRV 118

Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785
           P+PA RP G                     VVV+NPMSVD SGKLVSNVVVGVTT
Sbjct: 119 PVPANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDSSGKLVSNVVVGVTT 173


>gb|AFK40862.1| unknown [Medicago truncatula]
          Length = 176

 Score =  238 bits (607), Expect = 1e-60
 Identities = 115/175 (65%), Positives = 125/175 (71%)
 Frame = +3

Query: 261 MQSQLMCSGCRTILLYPRGXXXXXXXXXXXXTSVPPPGMEMSQLICGGCRTLLMYTRGAS 440
           MQSQL+C+GCR  LLYPRG            T+VPPPGM+MSQL CGGCRTLLMYTRGA+
Sbjct: 1   MQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 441 SVRCSCCHTVNLVPGTASGQIAHVNCGNCHTTLMYPYGAPSVKCAVCHYVTNVNMGNARV 620
           SVRCSCCHTVNL P   S Q+AHV CGNC TTLMYPYGAPSVKC VCHY+TN+NM N R+
Sbjct: 61  SVRCSCCHTVNLAP--VSNQVAHVPCGNCRTTLMYPYGAPSVKCVVCHYITNINMSNGRL 118

Query: 621 PIPALRPSGVXXXXXXXXXXXXXXXXXXXXVVVQNPMSVDESGKLVSNVVVGVTT 785
           PIP  RP G                     VVV+NPMSVD SGKLVSNVVVGVTT
Sbjct: 119 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTT 173


Top