BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008497
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21970.3| unnamed protein product [Vitis vinifera]               80   2e-12
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat...    77   1e-11
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]    77   1e-11
ref|XP_002328520.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-11
ref|XP_002871729.1| pentatricopeptide repeat-containing protein ...    76   3e-11

>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
 Frame = +3

Query: 405  HITDVLSNSSIGDRIPIDDQLDTINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRYTYC 584
            H + VLS     D   I     T+N  I   C +N++ + FS+L  I+KLG  P+  T+ 
Sbjct: 25   HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFT 84

Query: 585  PLLIGLMFQSRFKEAIYMFDVLIIHGEIQPDILTYETILQ-VCFDMGCELDTKTFCMFLI 761
             L+ GL  + +  EA+ +FD +   G  QPD+LTY T++  +C D         F   L 
Sbjct: 85   TLIRGLCVEGKIGEALQLFDKMTGEG-FQPDVLTYGTLINGLCKDRQLTEALSLFSDMLA 143

Query: 762  --YAKNVIGYKPLDIKYCMRHHPWCQGLGLHQS--YNAIMIHYLPMHMMVNEYCRDKSFH 929
               + N   Y  L    C+  H W + + L  +  +  IM   L  + +V+  C++    
Sbjct: 144  KGISPNNFTYSSLIHGLCILGH-WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQ 202

Query: 930  L---ALDVIRDLERDLSVVGIEVYNTVISHMVYAGEIDQAVDLFYTSV 1064
            +   A+ +  ++ +   +     YNT+I  + + G +  A+ LF+  V
Sbjct: 203  IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 250



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
 Frame = +3

Query: 498  CRINQVNYGFSLLAGIIKLGLVPNRYTYCPLLIGLMFQSRFKEAIYMFDVLIIHGEIQPD 677
            C+  Q+    SL + ++  G+ PN +TY  L+ GL     +KEAI +F  +I H +I PD
Sbjct: 126  CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI-HRKIMPD 184

Query: 678  ILTYETILQ-VCFDMGCELDTKTFCMFLIYAKNVIGYKPLDIKYCMRHHPWCQGLGLHQS 854
             LT+ T++  +C +   ++  K   +F   ++   G  P  + Y    H  C    L  +
Sbjct: 185  QLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQ--GLIPDTVTYNTLIHGLCHVGRLRDA 242

Query: 855  ----YNAIMIHYLP----MHMMVNEYCRDKSFHLALDVIRDLERDLSVVGIEVYNTVISH 1010
                +  ++   +P      ++ +  C++     A+ +++ +E       I +Y+ V+  
Sbjct: 243  IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDG 302

Query: 1011 MVYAGEIDQAVDLFYTSVAKLKLKPTAKTYAAIILGLSYKGLWDKALELLTDVYFSD 1181
            M  AGE++ A DLF + ++   L P  +TY  +I GL  +GL  +A +L  ++  +D
Sbjct: 303  MCRAGELEAARDLF-SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358


>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
 Frame = +3

Query: 405  HITDVLSNSSIGDRIPIDDQLDTINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRYTYC 584
            H + VLS S   D   I   + T+N  I   C + ++ + FS+LA I+KLG  PN  T+ 
Sbjct: 74   HYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFN 133

Query: 585  PLLIGLMFQSRFKEAIYMFDVLIIHGEIQPDILTYETILQVCFDMGCELDTKTFCMFLIY 764
             L+ GL  + +  E +++FD +I  G  QP+++TY T++       C++ + +  + L+ 
Sbjct: 134  TLIRGLCVEGKIGEVLHLFDKMIGEG-FQPNVVTYGTLINGL----CKVGSTSAAIRLLR 188

Query: 765  AKNVIGYKPLDIKYCMRHHPWCQGLGLHQSYNAI--MIH------YLPMHMMVNEYCRDK 920
            +      +P  + Y       C+   + Q++N    MIH          + +++  C   
Sbjct: 189  SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 248

Query: 921  SFHLALDVIRDLERDLSVVGIEVYNTVISHMVYAGEIDQAVDLFYTSVAKLKLKPTAKTY 1100
             +     ++ ++     +  + +++TV+  +   G++ +A D+    + K  ++P   TY
Sbjct: 249  EWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV-VDMMIKRGVEPNVVTY 307

Query: 1101 AAIILGLSYKGLWDKALELLTDVYFSDYLP 1190
             A++ G   +   D+A+++   +    + P
Sbjct: 308  NALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 12/275 (4%)
 Frame = +3

Query: 405  HITDVLS---NSSIGDRIPIDDQLDTINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRY 575
            H+T +L+   NS I   + I       ++ +   C+  +V     ++  +IK G+ PN  
Sbjct: 252  HVTALLNEMVNSKIMPNVVI------FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 305

Query: 576  TYCPLLIGLMFQSRFKEAIYMFDVLIIHGEIQPDILTYETILQVCFDMGCELDTKTFCMF 755
            TY  L+ G   +S   EA+ +FD ++  G   PD+++Y T++       C++      M+
Sbjct: 306  TYNALMDGHCLRSEMDEAVKVFDTMVCKG-FAPDVVSYSTLINGY----CKIQRIEKAMY 360

Query: 756  LIYAKNVIGYKPLDIKYCMRHHPWCQGLGLHQSYNAIMIH---------YLPMHMMVNEY 908
            L          P  + Y    H  C  +G  Q   A+            ++   ++++  
Sbjct: 361  LFEEMCRKELIPNTVTYSTLMHGLCH-VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYL 419

Query: 909  CRDKSFHLALDVIRDLERDLSVVGIEVYNTVISHMVYAGEIDQAVDLFYTSVAKLKLKPT 1088
            C+++    A+ +++ +E       I++Y  VI  M  AGE++ A DLF ++++   L P 
Sbjct: 420  CKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF-SNLSSKGLHPN 478

Query: 1089 AKTYAAIILGLSYKGLWDKALELLTDVYFSDYLPH 1193
              TY  +I GL  +GL  +A +L  ++    Y P+
Sbjct: 479  VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513


>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
 Frame = +3

Query: 405  HITDVLSNSSIGDRIPIDDQLDTINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRYTYC 584
            H + VLS S   D   I   + T+N  I   C + ++ + FS+LA I+KLG  PN  T+ 
Sbjct: 83   HYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFN 142

Query: 585  PLLIGLMFQSRFKEAIYMFDVLIIHGEIQPDILTYETILQVCFDMGCELDTKTFCMFLIY 764
             L+ GL  + +  E +++FD +I  G  QP+++TY T++       C++ + +  + L+ 
Sbjct: 143  TLIRGLCVEGKIGEVLHLFDKMIGEG-FQPNVVTYGTLINGL----CKVGSTSAAIRLLR 197

Query: 765  AKNVIGYKPLDIKYCMRHHPWCQGLGLHQSYNAI--MIH------YLPMHMMVNEYCRDK 920
            +      +P  + Y       C+   + Q++N    MIH          + +++  C   
Sbjct: 198  SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 257

Query: 921  SFHLALDVIRDLERDLSVVGIEVYNTVISHMVYAGEIDQAVDLFYTSVAKLKLKPTAKTY 1100
             +     ++ ++     +  + +++TV+  +   G++ +A D+    + K  ++P   TY
Sbjct: 258  EWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV-VDMMIKRGVEPNVVTY 316

Query: 1101 AAIILGLSYKGLWDKALELLTDVYFSDYLP 1190
             A++ G   +   D+A+++   +    + P
Sbjct: 317  NALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 12/275 (4%)
 Frame = +3

Query: 405  HITDVLS---NSSIGDRIPIDDQLDTINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRY 575
            H+T +L+   NS I   + I       ++ +   C+  +V     ++  +IK G+ PN  
Sbjct: 261  HVTALLNEMVNSKIMPNVVI------FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 314

Query: 576  TYCPLLIGLMFQSRFKEAIYMFDVLIIHGEIQPDILTYETILQVCFDMGCELDTKTFCMF 755
            TY  L+ G   +S   EA+ +FD ++  G   PD+++Y T++       C++      M+
Sbjct: 315  TYNALMDGHCLRSEMDEAVKVFDTMVCKG-FAPDVVSYSTLINGY----CKIQRIEKAMY 369

Query: 756  LIYAKNVIGYKPLDIKYCMRHHPWCQGLGLHQSYNAIMIH---------YLPMHMMVNEY 908
            L          P  + Y    H  C  +G  Q   A+            ++   ++++  
Sbjct: 370  LFEEMCRKELIPNTVTYSTLMHGLCH-VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYL 428

Query: 909  CRDKSFHLALDVIRDLERDLSVVGIEVYNTVISHMVYAGEIDQAVDLFYTSVAKLKLKPT 1088
            C+++    A+ +++ +E       I++Y  VI  M  AGE++ A DLF ++++   L P 
Sbjct: 429  CKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF-SNLSSKGLHPN 487

Query: 1089 AKTYAAIILGLSYKGLWDKALELLTDVYFSDYLPH 1193
              TY  +I GL  +GL  +A +L  ++    Y P+
Sbjct: 488  VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522


>ref|XP_002328520.1| predicted protein [Populus trichocarpa] gi|222838235|gb|EEE76600.1|
            predicted protein [Populus trichocarpa]
          Length = 501

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
 Frame = +3

Query: 471  TINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRYTYCPLLIGLMFQSRFKEAIYMFDVL 650
            T+N  I   CR++ +++  S+L+ + KLG+ P+  T+  L+ GL  + R KEA+ +F+ +
Sbjct: 123  TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 651  IIHGEIQPDILTYETILQVCFDMGCELDTKTFCMFLIYAK-----NVIGYKPLDIKYCMR 815
                +  P+ +T+  ++ V    G   + +  C+F    +     N+  Y  L   YC+R
Sbjct: 183  -AGRDAMPNTVTFTILVDVLCKKGMVSEAR--CVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 816  HH--------PWCQGLGLHQSYNAIMIHYLPMHMMVNEYCRDKSFHLALDVIRDLERDLS 971
                          G G   S ++  I       ++N YC+ +    A  ++  +     
Sbjct: 240  LEMNDASKVFEIMVGKGCAPSVHSYSI-------LINGYCKSRRIDEAKALLTQMSEKEL 292

Query: 972  VVGIEVYNTVISHMVYAGEIDQAVDLFYTSVAKLKLKPTAKTYAAIILGLSYKGLWDKAL 1151
            +     YNT++  + +A  + +A +LF   +    + P  +TY+ ++ GL   G  ++AL
Sbjct: 293  IPNTVTYNTLMQGLCHASSLLEAQELF-KKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351

Query: 1152 ELLTDV 1169
            +LLT +
Sbjct: 352  KLLTSM 357


>ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317566|gb|EFH47988.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 504

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
 Frame = +3

Query: 471  TINSEIYLCCRINQVNYGFSLLAGIIKLGLVPNRYTYCPLLIGLMFQSRFKEAIYMFDVL 650
            T N+ I  C +  +++    L   +I+  L P+  TY  L+ GL   SR  EA  MF  +
Sbjct: 258  TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317

Query: 651  IIHGEIQPDILTYETILQ-VCFDMGCELDTKTFCMFLI--YAKNVIGYKPLDIKYCMRHH 821
            +  G   PD++TY  ++   C     E   K FC        +N + Y  L   YC    
Sbjct: 318  VSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376

Query: 822  -PWCQGLGLHQSYNAIMIHYLPMHMMVNEYCRDKSFHLALDVIRDLERDLSVVGIEVYNT 998
                + +     +  +  + +  +++++  C +     AL ++ D+++      I  YN 
Sbjct: 377  LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436

Query: 999  VISHMVYAGEIDQAVDLFYTSVAKLKLKPTAKTYAAIILGLSYKGLWDKALELLTDVYFS 1178
            +I  M  AGE+  A DL Y S+    L P   TY A++LGL  KGL  +A  L   +   
Sbjct: 437  IIRGMCKAGEVADAWDL-YCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495

Query: 1179 DYLPHD 1196
              LP++
Sbjct: 496  GILPNE 501