BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008496
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    57   2e-06
emb|CBI21970.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat...    56   3e-06

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = +3

Query: 228 TINSEIYHCCEVNQVIYGFSLLAGIIKLGLVPNRYTYCPLLVGLMFQSRFTEATSMFDML 407
           T+N  I   C +N++ + FS+L  I+KLG  P+  T+  L+ GL  + +  EA  +FD +
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 408 ITHREIQPDMLTYETII 458
            T    QPD+LTY T+I
Sbjct: 151 -TGEGFQPDVLTYGTLI 166


>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = +3

Query: 228 TINSEIYHCCEVNQVIYGFSLLAGIIKLGLVPNRYTYCPLLVGLMFQSRFTEATSMFDML 407
           T+N  I   C +N++ + FS+L  I+KLG  P+  T+  L+ GL  + +  EA  +FD +
Sbjct: 47  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 106

Query: 408 ITHREIQPDMLTYETII 458
            T    QPD+LTY T+I
Sbjct: 107 -TGEGFQPDVLTYGTLI 122


>ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|222862654|gb|EEF00161.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 228 TINSEIYHCCEVNQVIYGFSLLAGIIKLGLVPNRYTYCPLLVGLMFQSRFTEATSMFDML 407
           T+N  I   C +  V  GFS+LA +IKLGL P   T+  L+ GL     F +A  +FD +
Sbjct: 128 TLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM 187

Query: 408 ITHREIQPDMLTYETII 458
           +  R  QPD+ TY TII
Sbjct: 188 VA-RGCQPDVYTYTTII 203


>ref|XP_002309701.1| predicted protein [Populus trichocarpa] gi|222855677|gb|EEE93224.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = +3

Query: 255 CEVNQVIYGFSLLAGIIKLGLVPNRYTYCPLLVGLMFQSRFTEATSMFDMLITHREIQPD 434
           C++ +V  GFS+LA +IKLGL P   T+  L+ GL     F +A  +FD ++  +  QPD
Sbjct: 139 CQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA-KGCQPD 197

Query: 435 MLTYETII 458
           + TY TII
Sbjct: 198 VYTYNTII 205


>ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
 Frame = +3

Query: 129 DYDDDLVSSEEAGAHTTCF---HSIGDHKIPIDHVDTINSEIYHCCEVNQVIYGFSLLAG 299
           D++  L S  +   H+T     H +    IP  ++ T++  I   C +N+V + FS+LA 
Sbjct: 63  DFNKLLTSIAKMKHHSTLLSLSHQMDSFGIP-PNIYTLHILINSFCHLNRVGFAFSVLAK 121

Query: 300 IIKLGLVPNRYTYCPLLVGLMFQSRFTEATSMFDMLITHREIQPDMLTYETII 458
           I+KLG  P+  T+  L+ G+  + +  EA  +FD +I     +PD++TY T+I
Sbjct: 122 ILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI-GEGFRPDVVTYGTLI 173